RNA–Protein interactions for RNA: ENST00000547530.6

BRF1-211, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRF1, Length 3,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-211ENST00000547530 MSH5O43196 834 aa21.16■□□□□ 0.98
BRF1-211ENST00000547530 SYNJ1O43426 1573 aa21.15■□□□□ 0.98
BRF1-211ENST00000547530 SMARCA4P51532 1647 aa21.15■□□□□ 0.98
BRF1-211ENST00000547530 TONSLQ96HA7 1378 aa21.12■□□□□ 0.97
BRF1-211ENST00000547530 SALL2Q9Y467 1007 aaPredicted RBP21.11■□□□□ 0.97
BRF1-211ENST00000547530 RRP7BPQ9NSQ0 103 aa21.11■□□□□ 0.97
BRF1-211ENST00000547530 FOXD1Q16676 465 aa21.09■□□□□ 0.97
BRF1-211ENST00000547530 EIF4G1Q04637 1599 aaKnown RBP21.09■□□□□ 0.97
BRF1-211ENST00000547530 NPM2Q86SE8 214 aaKnown RBP21.06■□□□□ 0.96
BRF1-211ENST00000547530 ARAP1Q96P48 1450 aa21.06■□□□□ 0.96
BRF1-211ENST00000547530 PPP1R15AO75807 674 aaPredicted RBP21.03■□□□□ 0.96
BRF1-211ENST00000547530 CCDC184Q52MB2 194 aa21.02■□□□□ 0.96
BRF1-211ENST00000547530 MRS2Q9HD23 443 aa21■□□□□ 0.95
BRF1-211ENST00000547530 RTN4Q9NQC3 1192 aaKnown RBP20.97■□□□□ 0.95
BRF1-211ENST00000547530 SETD5Q9C0A6 1442 aa20.97■□□□□ 0.95
BRF1-211ENST00000547530 WDR97A6NE52 1622 aa20.95■□□□□ 0.94
BRF1-211ENST00000547530 PHLDB1Q86UU1 1377 aa20.92■□□□□ 0.94
BRF1-211ENST00000547530 DEKP35659 375 aaKnown RBP20.89■□□□□ 0.94
BRF1-211ENST00000547530 HSPA5P11021 654 aaKnown RBP20.89■□□□□ 0.93
BRF1-211ENST00000547530 KIF27Q86VH2 1401 aa20.87■□□□□ 0.93
BRF1-211ENST00000547530 CCER2I3L3R5 266 aa20.83■□□□□ 0.93
BRF1-211ENST00000547530 CCDC136Q96JN2 1154 aa20.8■□□□□ 0.92
BRF1-211ENST00000547530 CUX2O14529 1486 aa20.8■□□□□ 0.92
BRF1-211ENST00000547530 PAK3O75914 559 aaPredicted RBP20.8■□□□□ 0.92
BRF1-211ENST00000547530 ATAD2BQ9ULI0 1458 aa20.79■□□□□ 0.92
BRF1-211ENST00000547530 RTL5Q5HYW3 569 aaPredicted RBP20.79■□□□□ 0.92
BRF1-211ENST00000547530 RRBP1Q9P2E9 1410 aaKnown RBP20.77■□□□□ 0.92
BRF1-211ENST00000547530 ARHGAP35Q9NRY4 1499 aa20.77■□□□□ 0.92
BRF1-211ENST00000547530 EIF4G2P78344 907 aaKnown RBP eCLIP20.77■□□□□ 0.911e-6■■■■■ 36.9
BRF1-211ENST00000547530 MTUS2Q5JR59 1369 aa20.77■□□□□ 0.91
BRF1-211ENST00000547530 FHOD3Q2V2M9 1422 aa20.76■□□□□ 0.91
BRF1-211ENST00000547530 PPP4R2Q9NY27 417 aa20.76■□□□□ 0.91
BRF1-211ENST00000547530 LAS1LQ9Y4W2 734 aaKnown RBP20.76■□□□□ 0.91
BRF1-211ENST00000547530 CARMIL1Q5VZK9 1371 aa20.74■□□□□ 0.91
BRF1-211ENST00000547530 WASHC2AQ641Q2 1341 aa20.71■□□□□ 0.91
BRF1-211ENST00000547530 ZNF777Q9ULD5 760 aaPredicted RBP20.71■□□□□ 0.91
BRF1-211ENST00000547530 MAPKBP1O60336 1514 aa20.7■□□□□ 0.9
BRF1-211ENST00000547530 C11orf95C9JLR9 678 aaPredicted RBP20.7■□□□□ 0.9
BRF1-211ENST00000547530 KDM2AQ9Y2K7 1162 aa20.68■□□□□ 0.9
BRF1-211ENST00000547530 NOP58Q9Y2X3 529 aaKnown RBP20.68■□□□□ 0.9
BRF1-211ENST00000547530 L3MBTL2Q969R5 705 aa20.68■□□□□ 0.9
BRF1-211ENST00000547530 ANP32AP39687 249 aaKnown RBP20.68■□□□□ 0.9
BRF1-211ENST00000547530 PRXQ9BXM0 1461 aa20.67■□□□□ 0.9
BRF1-211ENST00000547530 ZBTB47Q9UFB7 747 aaPredicted RBP20.65■□□□□ 0.9
BRF1-211ENST00000547530 IGF1RP08069 1367 aa20.63■□□□□ 0.89
BRF1-211ENST00000547530 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.61■□□□□ 0.89
BRF1-211ENST00000547530 SKAP1Q86WV1 359 aa20.61■□□□□ 0.89
BRF1-211ENST00000547530 TMC1Q8TDI8 760 aa20.59■□□□□ 0.89
BRF1-211ENST00000547530 PRKRIP1Q9H875 184 aaPredicted RBP20.58■□□□□ 0.89
BRF1-211ENST00000547530 SLC4A1APQ9BWU0 796 aaKnown RBP20.58■□□□□ 0.88
BRF1-211ENST00000547530 FANCIQ9NVI1 1328 aa20.57■□□□□ 0.88
BRF1-211ENST00000547530 ANO8Q9HCE9 1232 aaPredicted RBP20.57■□□□□ 0.88
BRF1-211ENST00000547530 LRRC9Q6ZRR7 1453 aa20.55■□□□□ 0.88
BRF1-211ENST00000547530 CUX1P39880 1505 aa20.52■□□□□ 0.88
BRF1-211ENST00000547530 AKNAQ7Z591 1439 aa20.52■□□□□ 0.88
BRF1-211ENST00000547530 MPHOSPH9Q99550 1183 aa20.52■□□□□ 0.88
BRF1-211ENST00000547530 IL27Q8NEV9 243 aa20.51■□□□□ 0.87
BRF1-211ENST00000547530 TIMELESSQ9UNS1 1208 aa20.5■□□□□ 0.87
BRF1-211ENST00000547530 SLC4A3P48751 1232 aa20.49■□□□□ 0.87
BRF1-211ENST00000547530 NBPF8Q3BBV2 869 aa20.48■□□□□ 0.87
BRF1-211ENST00000547530 EIF5BO60841 1220 aaKnown RBP20.48■□□□□ 0.87
BRF1-211ENST00000547530 ARXQ96QS3 562 aa20.48■□□□□ 0.87
BRF1-211ENST00000547530 CCDC18Q5T9S5 1454 aa20.47■□□□□ 0.87
BRF1-211ENST00000547530 TOP2BQ02880 1626 aa20.46■□□□□ 0.87
BRF1-211ENST00000547530 PLIN1O60240 522 aa20.46■□□□□ 0.87
BRF1-211ENST00000547530 NEFMP07197 916 aa20.46■□□□□ 0.87
BRF1-211ENST00000547530 TDRD9Q8NDG6 1382 aaKnown RBP20.45■□□□□ 0.86
BRF1-211ENST00000547530 BICRAQ9NZM4 1560 aa20.44■□□□□ 0.86
BRF1-211ENST00000547530 UNC13AQ9UPW8 1703 aa20.44■□□□□ 0.86
BRF1-211ENST00000547530 ZNF644Q9H582 1327 aaPredicted RBP20.43■□□□□ 0.86
BRF1-211ENST00000547530 AQRO60306 1485 aaKnown RBP eCLIP20.42■□□□□ 0.868e-7■■■■■ 27.9
BRF1-211ENST00000547530 DAXXQ9UER7 740 aaPredicted RBP20.42■□□□□ 0.86
BRF1-211ENST00000547530 PTPRKQ15262 1439 aa20.42■□□□□ 0.86
BRF1-211ENST00000547530 FHAD1B1AJZ9 1412 aa20.41■□□□□ 0.86
BRF1-211ENST00000547530 FBLN2P98095 1184 aa20.41■□□□□ 0.86
BRF1-211ENST00000547530 EXOC6Q8TAG9 804 aa20.41■□□□□ 0.86
BRF1-211ENST00000547530 RGL3Q3MIN7 710 aa20.4■□□□□ 0.86
BRF1-211ENST00000547530 RAD54L2Q9Y4B4 1467 aa20.4■□□□□ 0.86
BRF1-211ENST00000547530 KIF7Q2M1P5 1343 aa20.39■□□□□ 0.85
BRF1-211ENST00000547530 TIAM1Q13009 1591 aa20.38■□□□□ 0.85
BRF1-211ENST00000547530 ERICH3Q5RHP9 1530 aa20.38■□□□□ 0.85
BRF1-211ENST00000547530 IPO9Q96P70 1041 aaKnown RBP20.37■□□□□ 0.85
BRF1-211ENST00000547530 FGD6Q6ZV73 1430 aa20.35■□□□□ 0.85
BRF1-211ENST00000547530 CC2D1BQ5T0F9 858 aaKnown RBP20.34■□□□□ 0.85
BRF1-211ENST00000547530 ZBED9Q6R2W3 1325 aa20.33■□□□□ 0.85
BRF1-211ENST00000547530 NUDCQ9Y266 331 aa20.32■□□□□ 0.84
BRF1-211ENST00000547530 CCDC7Q96M83 1385 aa20.31■□□□□ 0.84
BRF1-211ENST00000547530 CARD11Q9BXL7 1154 aa20.31■□□□□ 0.84
BRF1-211ENST00000547530 FGD5Q6ZNL6 1462 aa20.31■□□□□ 0.84
BRF1-211ENST00000547530 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.29■□□□□ 0.844e-6■■□□□ 14.4
BRF1-211ENST00000547530 CDCA7LQ96GN5 454 aa20.29■□□□□ 0.84
BRF1-211ENST00000547530 FMN1Q68DA7 1419 aa20.27■□□□□ 0.84
BRF1-211ENST00000547530 RGS3P49796 1198 aa20.27■□□□□ 0.84
BRF1-211ENST00000547530 UACAQ9BZF9 1416 aa20.27■□□□□ 0.83
BRF1-211ENST00000547530 CFTRP13569 1480 aa20.26■□□□□ 0.83
BRF1-211ENST00000547530 PKD2Q13563 968 aa20.25■□□□□ 0.83
BRF1-211ENST00000547530 DCAF11Q8TEB1 546 aa20.24■□□□□ 0.83
BRF1-211ENST00000547530 NAIPQ13075 1403 aa20.23■□□□□ 0.83
BRF1-211ENST00000547530 CNTLNQ9NXG0 1405 aa20.23■□□□□ 0.83
BRF1-211ENST00000547530 PCF11O94913 1555 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms