RNA–Protein interactions for RNA: ENST00000547441.1

PRKD1-206, Transcript of protein kinase D1, humanhuman

TSL 3

Gene PRKD1, Length 547 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-206ENST00000547441 WRNQ14191 1432 aaPredicted RBP eCLIP17.35■□□□□ 0.37
PRKD1-206ENST00000547441 KCNA4P22459 653 aa17.33■□□□□ 0.36
PRKD1-206ENST00000547441 FHAD1B1AJZ9 1412 aa17.31■□□□□ 0.36
PRKD1-206ENST00000547441 KIF13AQ9H1H9 1805 aa17.29■□□□□ 0.36
PRKD1-206ENST00000547441 BIVM-ERCC5R4GMW8 1640 aa17.29■□□□□ 0.36
PRKD1-206ENST00000547441 TOP2BQ02880 1626 aa17.28■□□□□ 0.36
PRKD1-206ENST00000547441 ERICH3Q5RHP9 1530 aa17.26■□□□□ 0.35
PRKD1-206ENST00000547441 PRG4Q92954 1404 aaPredicted RBP17.22■□□□□ 0.35
PRKD1-206ENST00000547441 JPH4Q96JJ6 628 aa17.16■□□□□ 0.34
PRKD1-206ENST00000547441 ABCC10Q5T3U5 1492 aa17.16■□□□□ 0.34
PRKD1-206ENST00000547441 RUSC2Q8N2Y8 1516 aa17.16■□□□□ 0.34
PRKD1-206ENST00000547441 PPP4R3CPQ6ZMV5 832 aa17.14■□□□□ 0.33
PRKD1-206ENST00000547441 MAPKBP1O60336 1514 aa17.14■□□□□ 0.33
PRKD1-206ENST00000547441 DIP2BQ9P265 1576 aa17.12■□□□□ 0.33
PRKD1-206ENST00000547441 FAM69CQ0P6D2 419 aa17.12■□□□□ 0.33
PRKD1-206ENST00000547441 ADCY10Q96PN6 1610 aa17.1■□□□□ 0.33
PRKD1-206ENST00000547441 NPM1P06748 294 aaKnown RBP eCLIP17.09■□□□□ 0.33
PRKD1-206ENST00000547441 KDM6BO15054 1643 aa17.04■□□□□ 0.32
PRKD1-206ENST00000547441 KIAA0586Q9BVV6 1533 aa17.01■□□□□ 0.31
PRKD1-206ENST00000547441 KDM4FA0A1W2PPD8 638 aa16.99■□□□□ 0.31
PRKD1-206ENST00000547441 TSPOAP1O95153 1857 aa16.99■□□□□ 0.31
PRKD1-206ENST00000547441 CUL7Q14999 1698 aa16.96■□□□□ 0.31
PRKD1-206ENST00000547441 IGF1RP08069 1367 aa16.94■□□□□ 0.3
PRKD1-206ENST00000547441 PTPRGP23470 1445 aa16.91■□□□□ 0.3
PRKD1-206ENST00000547441 KIF27Q86VH2 1401 aa16.91■□□□□ 0.3
PRKD1-206ENST00000547441 ABCC2Q92887 1545 aa16.89■□□□□ 0.29
PRKD1-206ENST00000547441 GLI2P10070 1586 aa16.86■□□□□ 0.29
PRKD1-206ENST00000547441 PPRC1Q5VV67 1664 aaKnown RBP16.86■□□□□ 0.29
PRKD1-206ENST00000547441 TNIKQ9UKE5 1360 aa16.86■□□□□ 0.29
PRKD1-206ENST00000547441 CARMIL2Q6F5E8 1435 aa16.86■□□□□ 0.29
PRKD1-206ENST00000547441 MSH5O43196 834 aa16.85■□□□□ 0.29
PRKD1-206ENST00000547441 ASXL2Q76L83 1435 aa16.85■□□□□ 0.29
PRKD1-206ENST00000547441 PLB1Q6P1J6 1458 aa16.85■□□□□ 0.29
PRKD1-206ENST00000547441 NCBP3Q53F19 620 aaKnown RBP16.84■□□□□ 0.29
PRKD1-206ENST00000547441 UHRF1BP1LA0JNW5 1464 aa16.82■□□□□ 0.28
PRKD1-206ENST00000547441 CARMIL1Q5VZK9 1371 aa16.82■□□□□ 0.28
PRKD1-206ENST00000547441 TTBK1Q5TCY1 1321 aaPredicted RBP16.82■□□□□ 0.28
PRKD1-206ENST00000547441 IQGAP2Q13576 1575 aa16.81■□□□□ 0.28
PRKD1-206ENST00000547441 ADGRL1O94910 1474 aa16.8■□□□□ 0.28
PRKD1-206ENST00000547441 ILDR1Q86SU0 546 aaPredicted RBP16.8■□□□□ 0.28
PRKD1-206ENST00000547441 UACAQ9BZF9 1416 aa16.78■□□□□ 0.28
PRKD1-206ENST00000547441 MAP3K4Q9Y6R4 1608 aa16.76■□□□□ 0.27
PRKD1-206ENST00000547441 EPRSP07814 1512 aaKnown RBP16.75■□□□□ 0.27
PRKD1-206ENST00000547441 DISP1Q96F81 1524 aa16.75■□□□□ 0.27
PRKD1-206ENST00000547441 COL17A1Q9UMD9 1497 aaPredicted RBP16.75■□□□□ 0.27
PRKD1-206ENST00000547441 KDM5BQ9UGL1 1544 aa16.75■□□□□ 0.27
PRKD1-206ENST00000547441 TEX14Q8IWB6 1497 aa16.73■□□□□ 0.27
PRKD1-206ENST00000547441 EHMT2Q96KQ7 1210 aa16.72■□□□□ 0.27
PRKD1-206ENST00000547441 ZCCHC11Q5TAX3 1644 aaKnown RBP16.7■□□□□ 0.26
PRKD1-206ENST00000547441 UGGT2Q9NYU1 1516 aa16.7■□□□□ 0.26
PRKD1-206ENST00000547441 HECW2Q9P2P5 1572 aa16.69■□□□□ 0.26
PRKD1-206ENST00000547441 KIAA0556O60303 1618 aa16.67■□□□□ 0.26
PRKD1-206ENST00000547441 WDR7Q9Y4E6 1490 aa16.64■□□□□ 0.25
PRKD1-206ENST00000547441 RAPGEF2Q9Y4G8 1499 aa16.64■□□□□ 0.25
PRKD1-206ENST00000547441 SCAF1Q9H7N4 1312 aaKnown RBP16.63■□□□□ 0.25
PRKD1-206ENST00000547441 NPM3O75607 178 aaKnown RBP16.61■□□□□ 0.25
PRKD1-206ENST00000547441 SLC4A1APQ9BWU0 796 aaKnown RBP16.6■□□□□ 0.25
PRKD1-206ENST00000547441 MAGI3Q5TCQ9 1506 aa16.58■□□□□ 0.24
PRKD1-206ENST00000547441 CFAP43Q8NDM7 1665 aa16.58■□□□□ 0.24
PRKD1-206ENST00000547441 CD109Q6YHK3 1445 aa16.56■□□□□ 0.24
PRKD1-206ENST00000547441 CNKSR2Q8WXI2 1034 aa16.55■□□□□ 0.24
PRKD1-206ENST00000547441 CTTNBP2Q8WZ74 1663 aa16.54■□□□□ 0.24
PRKD1-206ENST00000547441 ABCA8O94911 1581 aa16.53■□□□□ 0.24
PRKD1-206ENST00000547441 GOLGA3Q08378 1498 aa16.53■□□□□ 0.24
PRKD1-206ENST00000547441 KIF21BO75037 1637 aa16.5■□□□□ 0.23
PRKD1-206ENST00000547441 KCNH8Q96L42 1107 aa16.49■□□□□ 0.23
PRKD1-206ENST00000547441 ARAP3Q8WWN8 1544 aa16.46■□□□□ 0.23
PRKD1-206ENST00000547441 FBXO41Q8TF61 875 aa16.4■□□□□ 0.22
PRKD1-206ENST00000547441 PRXQ9BXM0 1461 aa16.4■□□□□ 0.22
PRKD1-206ENST00000547441 ADAMTSL3P82987 1691 aa16.4■□□□□ 0.22
PRKD1-206ENST00000547441 ABCA9Q8IUA7 1624 aa16.39■□□□□ 0.21
PRKD1-206ENST00000547441 PTPRMP28827 1452 aa16.39■□□□□ 0.21
PRKD1-206ENST00000547441 PHLDB1Q86UU1 1377 aa16.38■□□□□ 0.21
PRKD1-206ENST00000547441 ATP10BO94823 1461 aa16.37■□□□□ 0.21
PRKD1-206ENST00000547441 ARID3CA6NKF2 412 aa16.34■□□□□ 0.21
PRKD1-206ENST00000547441 MAPK8IP2Q13387 824 aaPredicted RBP16.34■□□□□ 0.21
PRKD1-206ENST00000547441 NEO1Q92859 1461 aa16.34■□□□□ 0.21
PRKD1-206ENST00000547441 FAM9AQ8IZU1 332 aaPredicted RBP16.33■□□□□ 0.2
PRKD1-206ENST00000547441 BCORL1Q5H9F3 1711 aa16.32■□□□□ 0.2
PRKD1-206ENST00000547441 FRMPD1Q5SYB0 1578 aa16.31■□□□□ 0.2
PRKD1-206ENST00000547441 RAPGEF3O95398 923 aa16.31■□□□□ 0.2
PRKD1-206ENST00000547441 MADDQ8WXG6 1647 aa16.3■□□□□ 0.2
PRKD1-206ENST00000547441 PCF11O94913 1555 aaKnown RBP16.3■□□□□ 0.2
PRKD1-206ENST00000547441 SAMD9Q5K651 1589 aa16.3■□□□□ 0.2
PRKD1-206ENST00000547441 EEA1Q15075 1411 aa16.29■□□□□ 0.2
PRKD1-206ENST00000547441 P3H3Q8IVL6 736 aa16.29■□□□□ 0.2
PRKD1-206ENST00000547441 RAPGEF6Q8TEU7 1601 aa16.29■□□□□ 0.2
PRKD1-206ENST00000547441 LMTK3Q96Q04 1460 aa16.28■□□□□ 0.2
PRKD1-206ENST00000547441 CSRNP3Q8WYN3 585 aa16.27■□□□□ 0.2
PRKD1-206ENST00000547441 ARHGEF40Q8TER5 1519 aa16.26■□□□□ 0.19
PRKD1-206ENST00000547441 ARID4BQ4LE39 1312 aaPredicted RBP16.25■□□□□ 0.19
PRKD1-206ENST00000547441 RIMS1Q86UR5 1692 aaKnown RBP16.23■□□□□ 0.19
PRKD1-206ENST00000547441 NUP153P49790 1475 aaKnown RBP16.22■□□□□ 0.19
PRKD1-206ENST00000547441 RICTORQ6R327 1708 aa16.22■□□□□ 0.19
PRKD1-206ENST00000547441 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.21■□□□□ 0.19
PRKD1-206ENST00000547441 HNRNPUL2Q1KMD3 747 aaKnown RBP16.21■□□□□ 0.19
PRKD1-206ENST00000547441 DENND4BO75064 1496 aaPredicted RBP16.21■□□□□ 0.19
PRKD1-206ENST00000547441 CFAP74Q9C0B2 1584 aa16.19■□□□□ 0.18
PRKD1-206ENST00000547441 FHOD3Q2V2M9 1422 aa16.19■□□□□ 0.18
PRKD1-206ENST00000547441 ZMYM4Q5VZL5 1548 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms