RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 ANP32AP39687 249 aaKnown RBP16.48■□□□□ 0.23
RBFOX1-208ENST00000547372 PKNOX2Q96KN3 472 aa16.48■□□□□ 0.23
RBFOX1-208ENST00000547372 LAS1LQ9Y4W2 734 aaKnown RBP16.48■□□□□ 0.23
RBFOX1-208ENST00000547372 PPP4R2Q9NY27 417 aa16.42■□□□□ 0.22
RBFOX1-208ENST00000547372 BAZ1AQ9NRL2 1556 aaPredicted RBP16.41■□□□□ 0.22
RBFOX1-208ENST00000547372 NEFMP07197 916 aa16.41■□□□□ 0.22
RBFOX1-208ENST00000547372 BRPF3Q9ULD4 1205 aa16.41■□□□□ 0.22
RBFOX1-208ENST00000547372 CCER2I3L3R5 266 aa16.4■□□□□ 0.22
RBFOX1-208ENST00000547372 CEP164Q9UPV0 1460 aa16.38■□□□□ 0.21
RBFOX1-208ENST00000547372 FAM50AQ14320 339 aaKnown RBP16.36■□□□□ 0.21
RBFOX1-208ENST00000547372 IPO9Q96P70 1041 aaKnown RBP16.36■□□□□ 0.21
RBFOX1-208ENST00000547372 PPP1R15AO75807 674 aaPredicted RBP16.35■□□□□ 0.21
RBFOX1-208ENST00000547372 SIN3AQ96ST3 1273 aa16.35■□□□□ 0.21
RBFOX1-208ENST00000547372 POLR3GLQ9BT43 218 aa16.32■□□□□ 0.2
RBFOX1-208ENST00000547372 SENP3-EIF4A1A0A087X0R7 540 aa16.31■□□□□ 0.2
RBFOX1-208ENST00000547372 PLEKHG5O94827 1062 aa16.31■□□□□ 0.2
RBFOX1-208ENST00000547372 KANK4Q5T7N3 995 aaPredicted RBP16.29■□□□□ 0.2
RBFOX1-208ENST00000547372 FAM9BQ8IZU0 186 aa16.28■□□□□ 0.2
RBFOX1-208ENST00000547372 BAZ1BQ9UIG0 1483 aaKnown RBP16.27■□□□□ 0.2
RBFOX1-208ENST00000547372 VSIG10Q8N0Z9 540 aa16.27■□□□□ 0.2
RBFOX1-208ENST00000547372 NACADO15069 1562 aa16.27■□□□□ 0.19
RBFOX1-208ENST00000547372 KIF21BO75037 1637 aa16.25■□□□□ 0.19
RBFOX1-208ENST00000547372 WDR97A6NE52 1622 aa16.22■□□□□ 0.19
RBFOX1-208ENST00000547372 TOP2AP11388 1531 aaKnown RBP16.22■□□□□ 0.19
RBFOX1-208ENST00000547372 RAB3GAP2Q9H2M9 1393 aa16.21■□□□□ 0.18
RBFOX1-208ENST00000547372 RAPGEF2Q9Y4G8 1499 aa16.21■□□□□ 0.18
RBFOX1-208ENST00000547372 CCNB3Q8WWL7 1395 aa16.19■□□□□ 0.18
RBFOX1-208ENST00000547372 GLIPR1L2Q4G1C9 344 aa16.19■□□□□ 0.18
RBFOX1-208ENST00000547372 SMARCA2P51531 1590 aa16.19■□□□□ 0.18
RBFOX1-208ENST00000547372 PODXL2Q9NZ53 605 aa16.19■□□□□ 0.18
RBFOX1-208ENST00000547372 RRBP1Q9P2E9 1410 aaKnown RBP16.18■□□□□ 0.18
RBFOX1-208ENST00000547372 CUX2O14529 1486 aa16.16■□□□□ 0.18
RBFOX1-208ENST00000547372 ZMYND15Q9H091 742 aa16.16■□□□□ 0.18
RBFOX1-208ENST00000547372 MAPKBP1O60336 1514 aa16.16■□□□□ 0.18
RBFOX1-208ENST00000547372 GSE1Q14687 1217 aa16.11■□□□□ 0.17
RBFOX1-208ENST00000547372 DAXXQ9UER7 740 aaPredicted RBP16.1■□□□□ 0.17
RBFOX1-208ENST00000547372 ARXQ96QS3 562 aa16.09■□□□□ 0.17
RBFOX1-208ENST00000547372 WASHC2AQ641Q2 1341 aa16.09■□□□□ 0.17
RBFOX1-208ENST00000547372 RSPH6AQ9H0K4 717 aa16.09■□□□□ 0.17
RBFOX1-208ENST00000547372 SLC4A3P48751 1232 aa16.08■□□□□ 0.17
RBFOX1-208ENST00000547372 CCDC184Q52MB2 194 aa16.08■□□□□ 0.16
RBFOX1-208ENST00000547372 P3H3Q8IVL6 736 aa16.07■□□□□ 0.16
RBFOX1-208ENST00000547372 FRAT1Q92837 279 aaPredicted RBP16.07■□□□□ 0.16
RBFOX1-208ENST00000547372 SETD5Q9C0A6 1442 aa16.06■□□□□ 0.16
RBFOX1-208ENST00000547372 PPM1GO15355 546 aaPredicted RBP16.06■□□□□ 0.16
RBFOX1-208ENST00000547372 MRS2Q9HD23 443 aa16.05■□□□□ 0.16
RBFOX1-208ENST00000547372 ARAP1Q96P48 1450 aa16.04■□□□□ 0.16
RBFOX1-208ENST00000547372 PABPN1Q86U42 306 aaKnown RBP eCLIP16.04■□□□□ 0.16
RBFOX1-208ENST00000547372 USP35Q9P2H5 1018 aa16.04■□□□□ 0.16
RBFOX1-208ENST00000547372 C11orf95C9JLR9 678 aaPredicted RBP16.03■□□□□ 0.16
RBFOX1-208ENST00000547372 ARID4BQ4LE39 1312 aaPredicted RBP16.02■□□□□ 0.16
RBFOX1-208ENST00000547372 SYNJ1O43426 1573 aa16.02■□□□□ 0.15
RBFOX1-208ENST00000547372 A0A0U1RQG5 324 aaPredicted RBP16.02■□□□□ 0.15
RBFOX1-208ENST00000547372 WASHC2CQ9Y4E1 1318 aa16■□□□□ 0.15
RBFOX1-208ENST00000547372 NAP1L5Q96NT1 182 aaPredicted RBP16■□□□□ 0.15
RBFOX1-208ENST00000547372 TONSLQ96HA7 1378 aa16■□□□□ 0.15
RBFOX1-208ENST00000547372 NFKBIBQ15653 356 aa15.97■□□□□ 0.15
RBFOX1-208ENST00000547372 SMARCA4P51532 1647 aa15.95■□□□□ 0.14
RBFOX1-208ENST00000547372 PDE4AP27815 886 aa15.94■□□□□ 0.14
RBFOX1-208ENST00000547372 HSP90AA2PQ14568 343 aaPredicted RBP15.94■□□□□ 0.14
RBFOX1-208ENST00000547372 ZNF326Q5BKZ1 582 aaKnown RBP15.91■□□□□ 0.14
RBFOX1-208ENST00000547372 AKNAQ7Z591 1439 aa15.91■□□□□ 0.14
RBFOX1-208ENST00000547372 ZBED9Q6R2W3 1325 aa15.9■□□□□ 0.14
RBFOX1-208ENST00000547372 SKAP1Q86WV1 359 aa15.9■□□□□ 0.14
RBFOX1-208ENST00000547372 DCAF11Q8TEB1 546 aa15.9■□□□□ 0.14
RBFOX1-208ENST00000547372 FAM43AQ8N2R8 423 aa15.88■□□□□ 0.13
RBFOX1-208ENST00000547372 FRAT2O75474 233 aaPredicted RBP15.86■□□□□ 0.13
RBFOX1-208ENST00000547372 HSP90AA1P07900 732 aaKnown RBP15.85■□□□□ 0.13
RBFOX1-208ENST00000547372 HSPA5P11021 654 aaKnown RBP15.82■□□□□ 0.12
RBFOX1-208ENST00000547372 ERICH3Q5RHP9 1530 aa15.81■□□□□ 0.12
RBFOX1-208ENST00000547372 PRXQ9BXM0 1461 aa15.81■□□□□ 0.12
RBFOX1-208ENST00000547372 EXOC6Q8TAG9 804 aa15.81■□□□□ 0.12
RBFOX1-208ENST00000547372 PRKRIP1Q9H875 184 aaPredicted RBP15.81■□□□□ 0.12
RBFOX1-208ENST00000547372 PHLDB1Q86UU1 1377 aa15.8■□□□□ 0.12
RBFOX1-208ENST00000547372 RRAGDQ9NQL2 400 aaPredicted RBP15.8■□□□□ 0.12
RBFOX1-208ENST00000547372 DDRGK1Q96HY6 314 aa15.8■□□□□ 0.12
RBFOX1-208ENST00000547372 PNNQ9H307 717 aaKnown RBP15.8■□□□□ 0.12
RBFOX1-208ENST00000547372 TCERG1O14776 1098 aaKnown RBP15.79■□□□□ 0.12
RBFOX1-208ENST00000547372 BACH2Q9BYV9 841 aa15.79■□□□□ 0.12
RBFOX1-208ENST00000547372 CHIC2Q9UKJ5 165 aa15.79■□□□□ 0.12
RBFOX1-208ENST00000547372 SLC24A1O60721 1099 aa15.78■□□□□ 0.12
RBFOX1-208ENST00000547372 FHAD1B1AJZ9 1412 aa15.77■□□□□ 0.12
RBFOX1-208ENST00000547372 ARHGAP35Q9NRY4 1499 aa15.77■□□□□ 0.12
RBFOX1-208ENST00000547372 NUDCQ9Y266 331 aa15.76■□□□□ 0.11
RBFOX1-208ENST00000547372 EIF4G2P78344 907 aaKnown RBP eCLIP15.75■□□□□ 0.11
RBFOX1-208ENST00000547372 CNTLNQ9NXG0 1405 aa15.74■□□□□ 0.11
RBFOX1-208ENST00000547372 SMG6Q86US8 1419 aaKnown RBP15.73■□□□□ 0.11
RBFOX1-208ENST00000547372 ARID3CA6NKF2 412 aa15.73■□□□□ 0.11
RBFOX1-208ENST00000547372 TMC1Q8TDI8 760 aa15.71■□□□□ 0.11
RBFOX1-208ENST00000547372 POGKQ9P215 609 aa15.71■□□□□ 0.11
RBFOX1-208ENST00000547372 UNC13AQ9UPW8 1703 aa15.7■□□□□ 0.1
RBFOX1-208ENST00000547372 TIAM1Q13009 1591 aa15.7■□□□□ 0.1
RBFOX1-208ENST00000547372 LRRC9Q6ZRR7 1453 aa15.7■□□□□ 0.1
RBFOX1-208ENST00000547372 RBM10P98175 930 aaKnown RBP15.69■□□□□ 0.1
RBFOX1-208ENST00000547372 GZF1Q9H116 711 aaPredicted RBP15.69■□□□□ 0.1
RBFOX1-208ENST00000547372 NCAPD3P42695 1498 aa15.69■□□□□ 0.1
RBFOX1-208ENST00000547372 RRP7BPQ9NSQ0 103 aa15.68■□□□□ 0.1
RBFOX1-208ENST00000547372 RNF123Q5XPI4 1314 aa15.68■□□□□ 0.1
RBFOX1-208ENST00000547372 RRP9O43818 475 aaKnown RBP15.68■□□□□ 0.1
RBFOX1-208ENST00000547372 ARID3AQ99856 593 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms