RNA–Protein interactions for RNA: ENST00000547065.1

VDR-204, Transcript of vitamin D receptor, humanhuman

TSL 2

Gene VDR, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-204ENST00000547065 EFCAB5A4FU69 1503 aa28.17■■■□□ 2.1
VDR-204ENST00000547065 CTTNBP2Q8WZ74 1663 aa28.13■■■□□ 2.09
VDR-204ENST00000547065 P3H3Q8IVL6 736 aa28.09■■■□□ 2.09
VDR-204ENST00000547065 WDR62O43379 1518 aa28.08■■■□□ 2.09
VDR-204ENST00000547065 IFT140Q96RY7 1462 aa28.06■■■□□ 2.08
VDR-204ENST00000547065 TIAM1Q13009 1591 aa28.06■■■□□ 2.08
VDR-204ENST00000547065 RRBP1Q9P2E9 1410 aaKnown RBP28.05■■■□□ 2.08
VDR-204ENST00000547065 FHOD3Q2V2M9 1422 aa28.04■■■□□ 2.08
VDR-204ENST00000547065 AQRO60306 1485 aaKnown RBP eCLIP28.03■■■□□ 2.08
VDR-204ENST00000547065 GRIN2BQ13224 1484 aa28■■■□□ 2.07
VDR-204ENST00000547065 CASKIN1Q8WXD9 1431 aa27.99■■■□□ 2.07
VDR-204ENST00000547065 PBRM1Q86U86 1689 aa27.99■■■□□ 2.07
VDR-204ENST00000547065 LRRC9Q6ZRR7 1453 aa27.98■■■□□ 2.07
VDR-204ENST00000547065 FYCO1Q9BQS8 1478 aa27.98■■■□□ 2.07
VDR-204ENST00000547065 FMN1Q68DA7 1419 aa27.98■■■□□ 2.07
VDR-204ENST00000547065 ERCC6Q03468 1493 aa27.97■■■□□ 2.07
VDR-204ENST00000547065 PCF11O94913 1555 aaKnown RBP27.96■■■□□ 2.07
VDR-204ENST00000547065 CCNB3Q8WWL7 1395 aa27.95■■■□□ 2.06
VDR-204ENST00000547065 SAMD9Q5K651 1589 aa27.93■■■□□ 2.06
VDR-204ENST00000547065 ATP1B4Q9UN42 357 aaPredicted RBP27.91■■■□□ 2.06
VDR-204ENST00000547065 ADAMTS12P58397 1594 aa27.91■■■□□ 2.06
VDR-204ENST00000547065 CFAP43Q8NDM7 1665 aa27.9■■■□□ 2.06
VDR-204ENST00000547065 ZNF608Q9ULD9 1512 aaPredicted RBP27.88■■■□□ 2.05
VDR-204ENST00000547065 SNAPC4Q5SXM2 1469 aa27.82■■■□□ 2.04
VDR-204ENST00000547065 THOC2Q8NI27 1593 aaKnown RBP27.81■■■□□ 2.04
VDR-204ENST00000547065 PHLDB1Q86UU1 1377 aa27.78■■■□□ 2.04
VDR-204ENST00000547065 IQGAP2Q13576 1575 aa27.77■■■□□ 2.04
VDR-204ENST00000547065 CLSPNQ9HAW4 1339 aa27.73■■■□□ 2.03
VDR-204ENST00000547065 EIF4G3O43432 1585 aaKnown RBP27.72■■■□□ 2.03
VDR-204ENST00000547065 KIAA0586Q9BVV6 1533 aa27.67■■■□□ 2.02
VDR-204ENST00000547065 UGGT2Q9NYU1 1516 aa27.67■■■□□ 2.02
VDR-204ENST00000547065 ITGAEP38570 1179 aa27.66■■■□□ 2.02
VDR-204ENST00000547065 MAGI1Q96QZ7 1491 aaPredicted RBP27.66■■■□□ 2.02
VDR-204ENST00000547065 DHX57Q6P158 1386 aaKnown RBP27.66■■■□□ 2.02
VDR-204ENST00000547065 MTUS2Q5JR59 1369 aa27.65■■■□□ 2.02
VDR-204ENST00000547065 GRIN2AQ12879 1464 aa27.64■■■□□ 2.02
VDR-204ENST00000547065 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.64■■■□□ 2.02
VDR-204ENST00000547065 FAM50AQ14320 339 aaKnown RBP27.62■■■□□ 2.01
VDR-204ENST00000547065 CCDC18Q5T9S5 1454 aa27.59■■■□□ 2.01
VDR-204ENST00000547065 CHMP7Q8WUX9 453 aaPredicted RBP27.58■■■□□ 2
VDR-204ENST00000547065 SYNJ2O15056 1496 aa27.57■■■□□ 2
VDR-204ENST00000547065 LRRIQ1Q96JM4 1722 aa27.55■■■□□ 2
VDR-204ENST00000547065 HECW1Q76N89 1606 aa27.54■■■□□ 2
VDR-204ENST00000547065 SETD5Q9C0A6 1442 aa27.53■■■□□ 2
VDR-204ENST00000547065 EHBP1L1Q8N3D4 1523 aa27.52■■■□□ 2
VDR-204ENST00000547065 FGD6Q6ZV73 1430 aa27.52■■■□□ 2
VDR-204ENST00000547065 RAB3GAP2Q9H2M9 1393 aa27.52■■■□□ 2
VDR-204ENST00000547065 DISP1Q96F81 1524 aa27.5■■□□□ 1.99
VDR-204ENST00000547065 NCOA2Q15596 1464 aa27.49■■□□□ 1.99
VDR-204ENST00000547065 ZNF316A6NFI3 1004 aaPredicted RBP27.48■■□□□ 1.99
VDR-204ENST00000547065 EPRSP07814 1512 aaKnown RBP27.47■■□□□ 1.99
VDR-204ENST00000547065 KIAA0556O60303 1618 aa27.46■■□□□ 1.99
VDR-204ENST00000547065 SUPT6HQ7KZ85 1726 aaKnown RBP27.46■■□□□ 1.99
VDR-204ENST00000547065 MYOM3Q5VTT5 1437 aa27.45■■□□□ 1.98
VDR-204ENST00000547065 FBLN2P98095 1184 aa27.43■■□□□ 1.98
VDR-204ENST00000547065 CEP170Q5SW79 1584 aa27.42■■□□□ 1.98
VDR-204ENST00000547065 NUP160Q12769 1436 aa27.41■■□□□ 1.98
VDR-204ENST00000547065 ARHGEF11O15085 1522 aa27.41■■□□□ 1.98
VDR-204ENST00000547065 MAGI3Q5TCQ9 1506 aa27.4■■□□□ 1.98
VDR-204ENST00000547065 DIEXFQ68CQ4 756 aaKnown RBP27.39■■□□□ 1.98
VDR-204ENST00000547065 JPH4Q96JJ6 628 aa27.35■■□□□ 1.97
VDR-204ENST00000547065 CDK13Q14004 1512 aaKnown RBP27.34■■□□□ 1.97
VDR-204ENST00000547065 CARMIL2Q6F5E8 1435 aa27.33■■□□□ 1.97
VDR-204ENST00000547065 RAPGEF6Q8TEU7 1601 aa27.29■■□□□ 1.96
VDR-204ENST00000547065 NUP153P49790 1475 aaKnown RBP27.28■■□□□ 1.96
VDR-204ENST00000547065 CDK11AQ9UQ88 783 aaPredicted RBP27.27■■□□□ 1.96
VDR-204ENST00000547065 PTPN23Q9H3S7 1636 aa27.27■■□□□ 1.96
VDR-204ENST00000547065 TCOF1Q13428 1488 aaKnown RBP27.27■■□□□ 1.96
VDR-204ENST00000547065 MIA2Q96PC5 1412 aa27.26■■□□□ 1.95
VDR-204ENST00000547065 ARID3CA6NKF2 412 aa27.25■■□□□ 1.95
VDR-204ENST00000547065 PTPRKQ15262 1439 aa27.25■■□□□ 1.95
VDR-204ENST00000547065 MAPKBP1O60336 1514 aa27.25■■□□□ 1.95
VDR-204ENST00000547065 HFM1A2PYH4 1435 aa27.23■■□□□ 1.95
VDR-204ENST00000547065 PLB1Q6P1J6 1458 aa27.15■■□□□ 1.94
VDR-204ENST00000547065 NAIPQ13075 1403 aa27.14■■□□□ 1.94
VDR-204ENST00000547065 TROQ12816 1431 aaPredicted RBP27.11■■□□□ 1.93
VDR-204ENST00000547065 TIMELESSQ9UNS1 1208 aa27.11■■□□□ 1.93
VDR-204ENST00000547065 UACAQ9BZF9 1416 aa27.08■■□□□ 1.93
VDR-204ENST00000547065 AKNAQ7Z591 1439 aa27.07■■□□□ 1.92
VDR-204ENST00000547065 PRG4Q92954 1404 aaPredicted RBP27.05■■□□□ 1.92
VDR-204ENST00000547065 ABCA8O94911 1581 aa27.05■■□□□ 1.92
VDR-204ENST00000547065 SIN3AQ96ST3 1273 aa27.04■■□□□ 1.92
VDR-204ENST00000547065 CHIC2Q9UKJ5 165 aa27.02■■□□□ 1.92
VDR-204ENST00000547065 NEUROD1Q13562 356 aa27.01■■□□□ 1.91
VDR-204ENST00000547065 RRP7BPQ9NSQ0 103 aa27.01■■□□□ 1.91
VDR-204ENST00000547065 PTPRGP23470 1445 aa26.99■■□□□ 1.91
VDR-204ENST00000547065 PLEKHD1A6NEE1 506 aa26.99■■□□□ 1.91
VDR-204ENST00000547065 ACIN1Q9UKV3 1341 aaKnown RBP26.98■■□□□ 1.91
VDR-204ENST00000547065 CHD1O14646 1710 aa26.98■■□□□ 1.91
VDR-204ENST00000547065 ROCK1Q13464 1354 aa26.96■■□□□ 1.91
VDR-204ENST00000547065 ADCY10Q96PN6 1610 aa26.96■■□□□ 1.91
VDR-204ENST00000547065 ATP10BO94823 1461 aa26.96■■□□□ 1.91
VDR-204ENST00000547065 DAPK1P53355 1430 aa26.95■■□□□ 1.91
VDR-204ENST00000547065 GCC2Q8IWJ2 1684 aa26.95■■□□□ 1.9
VDR-204ENST00000547065 CFDP1Q9UEE9 299 aaPredicted RBP26.94■■□□□ 1.9
VDR-204ENST00000547065 ABCC5O15440 1437 aa26.94■■□□□ 1.9
VDR-204ENST00000547065 GPATCH8Q9UKJ3 1502 aaKnown RBP26.93■■□□□ 1.9
VDR-204ENST00000547065 ZNF644Q9H582 1327 aaPredicted RBP26.92■■□□□ 1.9
VDR-204ENST00000547065 DNMT1P26358 1616 aaKnown RBP26.91■■□□□ 1.9
VDR-204ENST00000547065 ITSN2Q9NZM3 1697 aa26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms