RNA–Protein interactions for RNA: ENST00000547019.1

R3HDM2-210, Transcript of R3H domain containing 2, humanhuman

TSL 3

Gene R3HDM2, Length 595 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-210ENST00000547019 PRG4Q92954 1404 aaPredicted RBP18.18■□□□□ 0.5
R3HDM2-210ENST00000547019 FHAD1B1AJZ9 1412 aa18.17■□□□□ 0.5
R3HDM2-210ENST00000547019 FAM69CQ0P6D2 419 aa18.17■□□□□ 0.5
R3HDM2-210ENST00000547019 RUSC2Q8N2Y8 1516 aa18.15■□□□□ 0.5
R3HDM2-210ENST00000547019 BIVM-ERCC5R4GMW8 1640 aa18.13■□□□□ 0.49
R3HDM2-210ENST00000547019 ERICH3Q5RHP9 1530 aa18.12■□□□□ 0.49
R3HDM2-210ENST00000547019 WRNQ14191 1432 aaPredicted RBP eCLIP18.08■□□□□ 0.49
R3HDM2-210ENST00000547019 TOP2BQ02880 1626 aa18.08■□□□□ 0.48
R3HDM2-210ENST00000547019 PPRC1Q5VV67 1664 aaKnown RBP18.07■□□□□ 0.48
R3HDM2-210ENST00000547019 JPH4Q96JJ6 628 aa18.04■□□□□ 0.48
R3HDM2-210ENST00000547019 HECW2Q9P2P5 1572 aa18.04■□□□□ 0.48
R3HDM2-210ENST00000547019 ADGRL1O94910 1474 aa18.03■□□□□ 0.48
R3HDM2-210ENST00000547019 NPM1P06748 294 aaKnown RBP eCLIP17.94■□□□□ 0.46
R3HDM2-210ENST00000547019 COL17A1Q9UMD9 1497 aaPredicted RBP17.91■□□□□ 0.46
R3HDM2-210ENST00000547019 CUL7Q14999 1698 aa17.88■□□□□ 0.45
R3HDM2-210ENST00000547019 GLI2P10070 1586 aa17.87■□□□□ 0.45
R3HDM2-210ENST00000547019 KIAA0586Q9BVV6 1533 aa17.85■□□□□ 0.45
R3HDM2-210ENST00000547019 MAP3K4Q9Y6R4 1608 aa17.83■□□□□ 0.45
R3HDM2-210ENST00000547019 ASXL2Q76L83 1435 aa17.83■□□□□ 0.45
R3HDM2-210ENST00000547019 ABCC2Q92887 1545 aa17.82■□□□□ 0.44
R3HDM2-210ENST00000547019 PLB1Q6P1J6 1458 aa17.76■□□□□ 0.43
R3HDM2-210ENST00000547019 PTPRGP23470 1445 aa17.76■□□□□ 0.43
R3HDM2-210ENST00000547019 EPRSP07814 1512 aaKnown RBP17.74■□□□□ 0.43
R3HDM2-210ENST00000547019 TTBK1Q5TCY1 1321 aaPredicted RBP17.72■□□□□ 0.43
R3HDM2-210ENST00000547019 UHRF1BP1LA0JNW5 1464 aa17.71■□□□□ 0.43
R3HDM2-210ENST00000547019 ZCCHC11Q5TAX3 1644 aaKnown RBP17.71■□□□□ 0.43
R3HDM2-210ENST00000547019 IGF1RP08069 1367 aa17.69■□□□□ 0.42
R3HDM2-210ENST00000547019 TNIKQ9UKE5 1360 aa17.68■□□□□ 0.42
R3HDM2-210ENST00000547019 KIF21BO75037 1637 aa17.68■□□□□ 0.42
R3HDM2-210ENST00000547019 FBXO41Q8TF61 875 aa17.67■□□□□ 0.42
R3HDM2-210ENST00000547019 KDM5BQ9UGL1 1544 aa17.67■□□□□ 0.42
R3HDM2-210ENST00000547019 IQGAP2Q13576 1575 aa17.66■□□□□ 0.42
R3HDM2-210ENST00000547019 TEX14Q8IWB6 1497 aa17.66■□□□□ 0.42
R3HDM2-210ENST00000547019 DISP1Q96F81 1524 aa17.65■□□□□ 0.42
R3HDM2-210ENST00000547019 UACAQ9BZF9 1416 aa17.64■□□□□ 0.42
R3HDM2-210ENST00000547019 SUPT5HO00267 1087 aaKnown RBP17.61■□□□□ 0.41
R3HDM2-210ENST00000547019 CARMIL2Q6F5E8 1435 aa17.61■□□□□ 0.41
R3HDM2-210ENST00000547019 KIF27Q86VH2 1401 aa17.57■□□□□ 0.4
R3HDM2-210ENST00000547019 CFAP43Q8NDM7 1665 aa17.56■□□□□ 0.4
R3HDM2-210ENST00000547019 WDR7Q9Y4E6 1490 aa17.56■□□□□ 0.4
R3HDM2-210ENST00000547019 KIAA0556O60303 1618 aa17.54■□□□□ 0.4
R3HDM2-210ENST00000547019 ADAMTSL3P82987 1691 aa17.54■□□□□ 0.4
R3HDM2-210ENST00000547019 CARMIL1Q5VZK9 1371 aa17.53■□□□□ 0.4
R3HDM2-210ENST00000547019 MAGI3Q5TCQ9 1506 aa17.52■□□□□ 0.39
R3HDM2-210ENST00000547019 UGGT2Q9NYU1 1516 aa17.51■□□□□ 0.39
R3HDM2-210ENST00000547019 PTPRMP28827 1452 aa17.49■□□□□ 0.39
R3HDM2-210ENST00000547019 PCF11O94913 1555 aaKnown RBP17.46■□□□□ 0.39
R3HDM2-210ENST00000547019 CD109Q6YHK3 1445 aa17.46■□□□□ 0.39
R3HDM2-210ENST00000547019 LMTK3Q96Q04 1460 aa17.44■□□□□ 0.38
R3HDM2-210ENST00000547019 MADDQ8WXG6 1647 aa17.43■□□□□ 0.38
R3HDM2-210ENST00000547019 BCORL1Q5H9F3 1711 aa17.43■□□□□ 0.38
R3HDM2-210ENST00000547019 ABCA8O94911 1581 aa17.41■□□□□ 0.38
R3HDM2-210ENST00000547019 ARAP3Q8WWN8 1544 aa17.41■□□□□ 0.38
R3HDM2-210ENST00000547019 FRMPD1Q5SYB0 1578 aa17.38■□□□□ 0.37
R3HDM2-210ENST00000547019 CTTNBP2Q8WZ74 1663 aa17.38■□□□□ 0.37
R3HDM2-210ENST00000547019 RIMS1Q86UR5 1692 aaKnown RBP17.36■□□□□ 0.37
R3HDM2-210ENST00000547019 ILDR2Q71H61 639 aa17.34■□□□□ 0.37
R3HDM2-210ENST00000547019 KCNH8Q96L42 1107 aa17.34■□□□□ 0.37
R3HDM2-210ENST00000547019 RAPGEF2Q9Y4G8 1499 aa17.32■□□□□ 0.36
R3HDM2-210ENST00000547019 ABCA9Q8IUA7 1624 aa17.32■□□□□ 0.36
R3HDM2-210ENST00000547019 SIGLEC1Q9BZZ2 1709 aa17.31■□□□□ 0.36
R3HDM2-210ENST00000547019 ARHGEF40Q8TER5 1519 aa17.26■□□□□ 0.35
R3HDM2-210ENST00000547019 RAPGEF3O95398 923 aa17.25■□□□□ 0.35
R3HDM2-210ENST00000547019 HSPA2P54652 639 aa17.25■□□□□ 0.35
R3HDM2-210ENST00000547019 RICTORQ6R327 1708 aa17.23■□□□□ 0.35
R3HDM2-210ENST00000547019 SOCS7O14512 581 aa17.21■□□□□ 0.35
R3HDM2-210ENST00000547019 ATP10BO94823 1461 aa17.2■□□□□ 0.34
R3HDM2-210ENST00000547019 DISP3Q9P2K9 1392 aa17.2■□□□□ 0.34
R3HDM2-210ENST00000547019 CERKQ8TCT0 537 aa17.2■□□□□ 0.34
R3HDM2-210ENST00000547019 GOLGA3Q08378 1498 aa17.19■□□□□ 0.34
R3HDM2-210ENST00000547019 NEO1Q92859 1461 aa17.19■□□□□ 0.34
R3HDM2-210ENST00000547019 ARID3CA6NKF2 412 aa17.19■□□□□ 0.34
R3HDM2-210ENST00000547019 SPATA31D1Q6ZQQ2 1576 aa17.17■□□□□ 0.34
R3HDM2-210ENST00000547019 FER1L4A9Z1Z3 1794 aa17.16■□□□□ 0.34
R3HDM2-210ENST00000547019 PHLDB1Q86UU1 1377 aa17.15■□□□□ 0.34
R3HDM2-210ENST00000547019 ARID4BQ4LE39 1312 aaPredicted RBP17.15■□□□□ 0.34
R3HDM2-210ENST00000547019 STRCQ7RTU9 1775 aa17.14■□□□□ 0.33
R3HDM2-210ENST00000547019 TTC37Q6PGP7 1564 aa17.13■□□□□ 0.33
R3HDM2-210ENST00000547019 PLPPR3Q6T4P5 718 aa17.1■□□□□ 0.33
R3HDM2-210ENST00000547019 RAPGEF6Q8TEU7 1601 aa17.1■□□□□ 0.33
R3HDM2-210ENST00000547019 PREX1Q8TCU6 1659 aa17.1■□□□□ 0.33
R3HDM2-210ENST00000547019 ZMYM4Q5VZL5 1548 aa17.09■□□□□ 0.33
R3HDM2-210ENST00000547019 YEATS2Q9ULM3 1422 aa17.08■□□□□ 0.32
R3HDM2-210ENST00000547019 FANCAO15360 1455 aa17.07■□□□□ 0.32
R3HDM2-210ENST00000547019 SAMD9Q5K651 1589 aa17.06■□□□□ 0.32
R3HDM2-210ENST00000547019 DENND4BO75064 1496 aaPredicted RBP17.05■□□□□ 0.32
R3HDM2-210ENST00000547019 FHOD3Q2V2M9 1422 aa17.05■□□□□ 0.32
R3HDM2-210ENST00000547019 ZFYVE16Q7Z3T8 1539 aa17.05■□□□□ 0.32
R3HDM2-210ENST00000547019 PRXQ9BXM0 1461 aa17.04■□□□□ 0.32
R3HDM2-210ENST00000547019 NUP153P49790 1475 aaKnown RBP17.03■□□□□ 0.32
R3HDM2-210ENST00000547019 CFAP74Q9C0B2 1584 aa17.02■□□□□ 0.32
R3HDM2-210ENST00000547019 EFCAB5A4FU69 1503 aa17.02■□□□□ 0.32
R3HDM2-210ENST00000547019 P3H3Q8IVL6 736 aa17.02■□□□□ 0.32
R3HDM2-210ENST00000547019 HECW1Q76N89 1606 aa17.02■□□□□ 0.31
R3HDM2-210ENST00000547019 ARHGEF12Q9NZN5 1544 aa17.01■□□□□ 0.31
R3HDM2-210ENST00000547019 AKNAQ7Z591 1439 aa17.01■□□□□ 0.31
R3HDM2-210ENST00000547019 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.01■□□□□ 0.31
R3HDM2-210ENST00000547019 POGZQ7Z3K3 1410 aa16.99■□□□□ 0.31
R3HDM2-210ENST00000547019 MLECQ14165 292 aa16.96■□□□□ 0.31
R3HDM2-210ENST00000547019 LTBP4Q8N2S1 1624 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms