RNA–Protein interactions for RNA: ENST00000546443.5

CALCOCO1-203, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-203ENST00000546443 EFCAB5A4FU69 1503 aa23.53■■□□□ 1.36
CALCOCO1-203ENST00000546443 GRIN2BQ13224 1484 aa23.52■■□□□ 1.36
CALCOCO1-203ENST00000546443 ZNF608Q9ULD9 1512 aaPredicted RBP23.51■■□□□ 1.35
CALCOCO1-203ENST00000546443 APLP2Q06481 763 aa23.51■■□□□ 1.35
CALCOCO1-203ENST00000546443 FHAD1B1AJZ9 1412 aa23.5■■□□□ 1.35
CALCOCO1-203ENST00000546443 EIF4G3O43432 1585 aaKnown RBP23.46■■□□□ 1.35
CALCOCO1-203ENST00000546443 SAMD9Q5K651 1589 aa23.43■■□□□ 1.34
CALCOCO1-203ENST00000546443 MAP3K1Q13233 1512 aa23.42■■□□□ 1.34
CALCOCO1-203ENST00000546443 PCF11O94913 1555 aaKnown RBP23.38■■□□□ 1.33
CALCOCO1-203ENST00000546443 TIAM1Q13009 1591 aa23.37■■□□□ 1.33
CALCOCO1-203ENST00000546443 FHOD3Q2V2M9 1422 aa23.37■■□□□ 1.33
CALCOCO1-203ENST00000546443 KANK4Q5T7N3 995 aaPredicted RBP23.35■■□□□ 1.33
CALCOCO1-203ENST00000546443 CFAP43Q8NDM7 1665 aa23.34■■□□□ 1.33
CALCOCO1-203ENST00000546443 SNAPC4Q5SXM2 1469 aa23.34■■□□□ 1.33
CALCOCO1-203ENST00000546443 P3H3Q8IVL6 736 aa23.32■■□□□ 1.32
CALCOCO1-203ENST00000546443 IQGAP2Q13576 1575 aa23.31■■□□□ 1.32
CALCOCO1-203ENST00000546443 FYCO1Q9BQS8 1478 aa23.31■■□□□ 1.32
CALCOCO1-203ENST00000546443 MAGI1Q96QZ7 1491 aaPredicted RBP23.29■■□□□ 1.32
CALCOCO1-203ENST00000546443 CASKIN1Q8WXD9 1431 aa23.29■■□□□ 1.32
CALCOCO1-203ENST00000546443 ZEB1P37275 1124 aaPredicted RBP23.28■■□□□ 1.32
CALCOCO1-203ENST00000546443 FMN1Q68DA7 1419 aa23.27■■□□□ 1.32
CALCOCO1-203ENST00000546443 GRIN2AQ12879 1464 aa23.26■■□□□ 1.31
CALCOCO1-203ENST00000546443 UGGT2Q9NYU1 1516 aa23.23■■□□□ 1.31
CALCOCO1-203ENST00000546443 LRRC9Q6ZRR7 1453 aa23.23■■□□□ 1.31
CALCOCO1-203ENST00000546443 RRBP1Q9P2E9 1410 aaKnown RBP23.21■■□□□ 1.31
CALCOCO1-203ENST00000546443 KIAA0586Q9BVV6 1533 aa23.2■■□□□ 1.3
CALCOCO1-203ENST00000546443 SYNJ2O15056 1496 aa23.2■■□□□ 1.3
CALCOCO1-203ENST00000546443 LRRIQ1Q96JM4 1722 aa23.18■■□□□ 1.3
CALCOCO1-203ENST00000546443 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.13■■□□□ 1.29
CALCOCO1-203ENST00000546443 CEP170Q5SW79 1584 aa23.13■■□□□ 1.29
CALCOCO1-203ENST00000546443 HNRNPUL2Q1KMD3 747 aaKnown RBP23.1■■□□□ 1.29
CALCOCO1-203ENST00000546443 KIAA0556O60303 1618 aa23.09■■□□□ 1.29
CALCOCO1-203ENST00000546443 NUP160Q12769 1436 aa23.09■■□□□ 1.29
CALCOCO1-203ENST00000546443 DISP1Q96F81 1524 aa23.08■■□□□ 1.29
CALCOCO1-203ENST00000546443 CCER1Q8TC90 406 aaPredicted RBP23.07■■□□□ 1.28
CALCOCO1-203ENST00000546443 CCNB3Q8WWL7 1395 aa23.06■■□□□ 1.28
CALCOCO1-203ENST00000546443 CHMP7Q8WUX9 453 aaPredicted RBP23.06■■□□□ 1.28
CALCOCO1-203ENST00000546443 ATP1B4Q9UN42 357 aaPredicted RBP23.06■■□□□ 1.28
CALCOCO1-203ENST00000546443 HECW1Q76N89 1606 aa23.04■■□□□ 1.28
CALCOCO1-203ENST00000546443 PHLDB1Q86UU1 1377 aa23.03■■□□□ 1.28
CALCOCO1-203ENST00000546443 CCDC18Q5T9S5 1454 aa23■■□□□ 1.27
CALCOCO1-203ENST00000546443 EHBP1L1Q8N3D4 1523 aa22.96■■□□□ 1.27
CALCOCO1-203ENST00000546443 EPRSP07814 1512 aaKnown RBP22.93■■□□□ 1.26
CALCOCO1-203ENST00000546443 FBLN2P98095 1184 aa22.93■■□□□ 1.26
CALCOCO1-203ENST00000546443 MAGI3Q5TCQ9 1506 aa22.93■■□□□ 1.26
CALCOCO1-203ENST00000546443 CHD1O14646 1710 aa22.93■■□□□ 1.26
CALCOCO1-203ENST00000546443 SUPT6HQ7KZ85 1726 aaKnown RBP22.93■■□□□ 1.26
CALCOCO1-203ENST00000546443 MTUS2Q5JR59 1369 aa22.92■■□□□ 1.26
CALCOCO1-203ENST00000546443 RAPGEF6Q8TEU7 1601 aa22.91■■□□□ 1.26
CALCOCO1-203ENST00000546443 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.89■■□□□ 1.26
CALCOCO1-203ENST00000546443 ARHGEF11O15085 1522 aa22.89■■□□□ 1.26
CALCOCO1-203ENST00000546443 NCOA2Q15596 1464 aa22.87■■□□□ 1.25
CALCOCO1-203ENST00000546443 CDK13Q14004 1512 aaKnown RBP22.87■■□□□ 1.25
CALCOCO1-203ENST00000546443 JPH4Q96JJ6 628 aa22.87■■□□□ 1.25
CALCOCO1-203ENST00000546443 CARMIL2Q6F5E8 1435 aa22.85■■□□□ 1.25
CALCOCO1-203ENST00000546443 FGD6Q6ZV73 1430 aa22.85■■□□□ 1.25
CALCOCO1-203ENST00000546443 NUP153P49790 1475 aaKnown RBP22.84■■□□□ 1.25
CALCOCO1-203ENST00000546443 MYOM3Q5VTT5 1437 aa22.8■■□□□ 1.24
CALCOCO1-203ENST00000546443 SHROOM2Q13796 1616 aa22.77■■□□□ 1.24
CALCOCO1-203ENST00000546443 FAM50AQ14320 339 aaKnown RBP22.77■■□□□ 1.24
CALCOCO1-203ENST00000546443 ABCA8O94911 1581 aa22.75■■□□□ 1.23
CALCOCO1-203ENST00000546443 DHX57Q6P158 1386 aaKnown RBP22.75■■□□□ 1.23
CALCOCO1-203ENST00000546443 PLB1Q6P1J6 1458 aa22.75■■□□□ 1.23
CALCOCO1-203ENST00000546443 ITGAEP38570 1179 aa22.74■■□□□ 1.23
CALCOCO1-203ENST00000546443 PTPN23Q9H3S7 1636 aa22.74■■□□□ 1.23
CALCOCO1-203ENST00000546443 TCOF1Q13428 1488 aaKnown RBP22.71■■□□□ 1.23
CALCOCO1-203ENST00000546443 PRG4Q92954 1404 aaPredicted RBP22.7■■□□□ 1.23
CALCOCO1-203ENST00000546443 SETD5Q9C0A6 1442 aa22.7■■□□□ 1.23
CALCOCO1-203ENST00000546443 CLSPNQ9HAW4 1339 aa22.7■■□□□ 1.22
CALCOCO1-203ENST00000546443 RAB3GAP2Q9H2M9 1393 aa22.69■■□□□ 1.22
CALCOCO1-203ENST00000546443 ADCY10Q96PN6 1610 aa22.66■■□□□ 1.22
CALCOCO1-203ENST00000546443 ARID3CA6NKF2 412 aa22.66■■□□□ 1.22
CALCOCO1-203ENST00000546443 MIA2Q96PC5 1412 aa22.65■■□□□ 1.22
CALCOCO1-203ENST00000546443 CLASP1Q7Z460 1538 aa22.65■■□□□ 1.22
CALCOCO1-203ENST00000546443 TROQ12816 1431 aaPredicted RBP22.64■■□□□ 1.21
CALCOCO1-203ENST00000546443 PTPRKQ15262 1439 aa22.63■■□□□ 1.21
CALCOCO1-203ENST00000546443 CDK11AQ9UQ88 783 aaPredicted RBP22.62■■□□□ 1.21
CALCOCO1-203ENST00000546443 PTPRGP23470 1445 aa22.59■■□□□ 1.21
CALCOCO1-203ENST00000546443 ATP10BO94823 1461 aa22.58■■□□□ 1.2
CALCOCO1-203ENST00000546443 ERCC6L2Q5T890 1561 aa22.56■■□□□ 1.2
CALCOCO1-203ENST00000546443 KIF14Q15058 1648 aa22.55■■□□□ 1.2
CALCOCO1-203ENST00000546443 ITSN2Q9NZM3 1697 aa22.55■■□□□ 1.2
CALCOCO1-203ENST00000546443 HFM1A2PYH4 1435 aa22.55■■□□□ 1.2
CALCOCO1-203ENST00000546443 MAPKBP1O60336 1514 aa22.54■■□□□ 1.2
CALCOCO1-203ENST00000546443 GCC2Q8IWJ2 1684 aa22.5■■□□□ 1.19
CALCOCO1-203ENST00000546443 NAIPQ13075 1403 aa22.49■■□□□ 1.19
CALCOCO1-203ENST00000546443 UACAQ9BZF9 1416 aa22.49■■□□□ 1.19
CALCOCO1-203ENST00000546443 AKNAQ7Z591 1439 aa22.49■■□□□ 1.19
CALCOCO1-203ENST00000546443 DNMT1P26358 1616 aaKnown RBP22.48■■□□□ 1.19
CALCOCO1-203ENST00000546443 GPATCH8Q9UKJ3 1502 aaKnown RBP22.47■■□□□ 1.19
CALCOCO1-203ENST00000546443 ABCC10Q5T3U5 1492 aa22.46■■□□□ 1.19
CALCOCO1-203ENST00000546443 CDC42BPAQ5VT25 1732 aa22.45■■□□□ 1.18
CALCOCO1-203ENST00000546443 ABCC2Q92887 1545 aa22.45■■□□□ 1.18
CALCOCO1-203ENST00000546443 PLEKHD1A6NEE1 506 aa22.44■■□□□ 1.18
CALCOCO1-203ENST00000546443 DAPK1P53355 1430 aa22.42■■□□□ 1.18
CALCOCO1-203ENST00000546443 CAMSAP2Q08AD1 1489 aa22.4■■□□□ 1.18
CALCOCO1-203ENST00000546443 ABCC5O15440 1437 aa22.4■■□□□ 1.18
CALCOCO1-203ENST00000546443 UHRF1BP1LA0JNW5 1464 aa22.37■■□□□ 1.17
CALCOCO1-203ENST00000546443 ZNF644Q9H582 1327 aaPredicted RBP22.37■■□□□ 1.17
CALCOCO1-203ENST00000546443 ROCK1Q13464 1354 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms