RNA–Protein interactions for RNA: ENST00000546260.5

SOD2-216, Transcript of superoxide dismutase 2, humanhuman

TSL 5

Gene SOD2, Length 4,302 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-216ENST00000546260 A0A0U1RQG5 324 aaPredicted RBP14□□□□□ -0.17
SOD2-216ENST00000546260 ARID4BQ4LE39 1312 aaPredicted RBP13.99□□□□□ -0.17
SOD2-216ENST00000546260 SENP3-EIF4A1A0A087X0R7 540 aa13.98□□□□□ -0.17
SOD2-216ENST00000546260 CCER2I3L3R5 266 aa13.96□□□□□ -0.18
SOD2-216ENST00000546260 HSP90AA2PQ14568 343 aaPredicted RBP13.93□□□□□ -0.18
SOD2-216ENST00000546260 FAM50AQ14320 339 aaKnown RBP13.91□□□□□ -0.18
SOD2-216ENST00000546260 GSE1Q14687 1217 aa13.91□□□□□ -0.18
SOD2-216ENST00000546260 HSP90AA1P07900 732 aaKnown RBP13.91□□□□□ -0.18
SOD2-216ENST00000546260 MRS2Q9HD23 443 aa13.91□□□□□ -0.18
SOD2-216ENST00000546260 ZMYND15Q9H091 742 aa13.9□□□□□ -0.18
SOD2-216ENST00000546260 SIN3AQ96ST3 1273 aa13.89□□□□□ -0.19
SOD2-216ENST00000546260 USP35Q9P2H5 1018 aa13.89□□□□□ -0.19
SOD2-216ENST00000546260 DDRGK1Q96HY6 314 aa13.86□□□□□ -0.19
SOD2-216ENST00000546260 ABCC9O60706 1549 aa13.84□□□□□ -0.19
SOD2-216ENST00000546260 PNNQ9H307 717 aaKnown RBP13.83□□□□□ -0.19
SOD2-216ENST00000546260 TNIKQ9UKE5 1360 aa13.83□□□□□ -0.2
SOD2-216ENST00000546260 DHX57Q6P158 1386 aaKnown RBP13.82□□□□□ -0.2
SOD2-216ENST00000546260 WRNQ14191 1432 aaPredicted RBP eCLIP13.81□□□□□ -0.2
SOD2-216ENST00000546260 RSF1Q96T23 1441 aaPredicted RBP13.8□□□□□ -0.2
SOD2-216ENST00000546260 SLC4A3P48751 1232 aa13.8□□□□□ -0.2
SOD2-216ENST00000546260 FRAT1Q92837 279 aaPredicted RBP13.8□□□□□ -0.2
SOD2-216ENST00000546260 BAZ1BQ9UIG0 1483 aaKnown RBP13.79□□□□□ -0.2
SOD2-216ENST00000546260 TONSLQ96HA7 1378 aa13.79□□□□□ -0.2
SOD2-216ENST00000546260 CLIP1P30622 1438 aa13.76□□□□□ -0.21
SOD2-216ENST00000546260 PABPN1Q86U42 306 aaKnown RBP eCLIP13.76□□□□□ -0.21
SOD2-216ENST00000546260 NFKBIBQ15653 356 aa13.72□□□□□ -0.21
SOD2-216ENST00000546260 ARID3AQ99856 593 aa13.72□□□□□ -0.21
SOD2-216ENST00000546260 FAM43AQ8N2R8 423 aa13.72□□□□□ -0.21
SOD2-216ENST00000546260 RB1CC1Q8TDY2 1594 aa13.71□□□□□ -0.22
SOD2-216ENST00000546260 PDE4AP27815 886 aa13.7□□□□□ -0.22
SOD2-216ENST00000546260 TRIM44Q96DX7 344 aaPredicted RBP13.69□□□□□ -0.22
SOD2-216ENST00000546260 PPP1R15AO75807 674 aaPredicted RBP13.68□□□□□ -0.22
SOD2-216ENST00000546260 TCERG1O14776 1098 aaKnown RBP13.67□□□□□ -0.22
SOD2-216ENST00000546260 L1TD1Q5T7N2 865 aaKnown RBP13.67□□□□□ -0.22
SOD2-216ENST00000546260 AMER1Q5JTC6 1135 aaPredicted RBP13.66□□□□□ -0.22
SOD2-216ENST00000546260 C11orf95C9JLR9 678 aaPredicted RBP13.65□□□□□ -0.22
SOD2-216ENST00000546260 SOGA1O94964 1423 aa13.65□□□□□ -0.22
SOD2-216ENST00000546260 EEA1Q15075 1411 aa13.64□□□□□ -0.23
SOD2-216ENST00000546260 GOLGA3Q08378 1498 aa13.64□□□□□ -0.23
SOD2-216ENST00000546260 WASHC2AQ641Q2 1341 aa13.63□□□□□ -0.23
SOD2-216ENST00000546260 GZF1Q9H116 711 aaPredicted RBP13.63□□□□□ -0.23
SOD2-216ENST00000546260 TMC1Q8TDI8 760 aa13.61□□□□□ -0.23
SOD2-216ENST00000546260 RRP9O43818 475 aaKnown RBP13.6□□□□□ -0.23
SOD2-216ENST00000546260 FRAT2O75474 233 aaPredicted RBP13.6□□□□□ -0.23
SOD2-216ENST00000546260 ANP32BQ92688 251 aaKnown RBP13.59□□□□□ -0.23
SOD2-216ENST00000546260 RGS3P49796 1198 aa13.59□□□□□ -0.23
SOD2-216ENST00000546260 SLKQ9H2G2 1235 aaPredicted RBP13.59□□□□□ -0.23
SOD2-216ENST00000546260 ZNF326Q5BKZ1 582 aaKnown RBP13.58□□□□□ -0.24
SOD2-216ENST00000546260 KANK4Q5T7N3 995 aaPredicted RBP13.58□□□□□ -0.24
SOD2-216ENST00000546260 WASHC2CQ9Y4E1 1318 aa13.57□□□□□ -0.24
SOD2-216ENST00000546260 EIF4G2P78344 907 aaKnown RBP eCLIP13.57□□□□□ -0.24
SOD2-216ENST00000546260 TNNT2P45379 298 aaPredicted RBP13.57□□□□□ -0.24
SOD2-216ENST00000546260 PDE4CQ08493 712 aa13.56□□□□□ -0.24
SOD2-216ENST00000546260 NUDCQ9Y266 331 aa13.55□□□□□ -0.24
SOD2-216ENST00000546260 RBM10P98175 930 aaKnown RBP13.55□□□□□ -0.24
SOD2-216ENST00000546260 RAB3GAP2Q9H2M9 1393 aa13.55□□□□□ -0.24
SOD2-216ENST00000546260 BECN1Q14457 450 aa13.55□□□□□ -0.24
SOD2-216ENST00000546260 VPS8Q8N3P4 1428 aa13.54□□□□□ -0.24
SOD2-216ENST00000546260 GOLGA6L3A6NEY3 463 aa13.54□□□□□ -0.24
SOD2-216ENST00000546260 EXOC6Q8TAG9 804 aa13.53□□□□□ -0.24
SOD2-216ENST00000546260 ZBED9Q6R2W3 1325 aa13.53□□□□□ -0.24
SOD2-216ENST00000546260 CCDC88BA6NC98 1476 aa13.53□□□□□ -0.24
SOD2-216ENST00000546260 CCNB3Q8WWL7 1395 aa13.52□□□□□ -0.25
SOD2-216ENST00000546260 SPRYD3Q8NCJ5 442 aa13.52□□□□□ -0.25
SOD2-216ENST00000546260 UPF2Q9HAU5 1272 aaKnown RBP13.51□□□□□ -0.25
SOD2-216ENST00000546260 HSPA5P11021 654 aaKnown RBP13.5□□□□□ -0.25
SOD2-216ENST00000546260 CCDC184Q52MB2 194 aa13.49□□□□□ -0.25
SOD2-216ENST00000546260 AKNAQ7Z591 1439 aa13.49□□□□□ -0.25
SOD2-216ENST00000546260 ABCC8Q09428 1581 aa13.48□□□□□ -0.25
SOD2-216ENST00000546260 BACH2Q9BYV9 841 aa13.48□□□□□ -0.25
SOD2-216ENST00000546260 CDK11BP21127 795 aaKnown RBP13.47□□□□□ -0.25
SOD2-216ENST00000546260 MYH16Q9H6N6 1097 aa13.47□□□□□ -0.25
SOD2-216ENST00000546260 FAM13BQ9NYF5 915 aa13.47□□□□□ -0.25
SOD2-216ENST00000546260 RRAGDQ9NQL2 400 aaPredicted RBP13.45□□□□□ -0.26
SOD2-216ENST00000546260 POGKQ9P215 609 aa13.45□□□□□ -0.26
SOD2-216ENST00000546260 MS4A1P11836 297 aa13.45□□□□□ -0.26
SOD2-216ENST00000546260 SCRIBQ14160 1630 aa13.44□□□□□ -0.26
SOD2-216ENST00000546260 RCAN3Q9UKA8 241 aa13.44□□□□□ -0.26
SOD2-216ENST00000546260 DCAF11Q8TEB1 546 aa13.43□□□□□ -0.26
SOD2-216ENST00000546260 PRKRIP1Q9H875 184 aaPredicted RBP13.43□□□□□ -0.26
SOD2-216ENST00000546260 NCLP19338 710 aaKnown RBP13.43□□□□□ -0.26
SOD2-216ENST00000546260 MSNP26038 577 aaKnown RBP13.42□□□□□ -0.26
SOD2-216ENST00000546260 CANXP27824 592 aaKnown RBP13.42□□□□□ -0.26
SOD2-216ENST00000546260 SKAP1Q86WV1 359 aa13.42□□□□□ -0.26
SOD2-216ENST00000546260 P3H3Q8IVL6 736 aa13.42□□□□□ -0.26
SOD2-216ENST00000546260 SETD5Q9C0A6 1442 aa13.42□□□□□ -0.26
SOD2-216ENST00000546260 CEP164Q9UPV0 1460 aa13.41□□□□□ -0.26
SOD2-216ENST00000546260 ZBTB7CA1YPR0 619 aa13.41□□□□□ -0.26
SOD2-216ENST00000546260 RUSC2Q8N2Y8 1516 aa13.41□□□□□ -0.26
SOD2-216ENST00000546260 PLIN1O60240 522 aa13.39□□□□□ -0.27
SOD2-216ENST00000546260 RRP1P56182 461 aaKnown RBP13.39□□□□□ -0.27
SOD2-216ENST00000546260 WDR97A6NE52 1622 aa13.38□□□□□ -0.27
SOD2-216ENST00000546260 DNTTIP2Q5QJE6 756 aaKnown RBP13.37□□□□□ -0.27
SOD2-216ENST00000546260 ZHX1Q9UKY1 873 aaPredicted RBP13.36□□□□□ -0.27
SOD2-216ENST00000546260 FAM161AQ3B820 660 aa13.35□□□□□ -0.27
SOD2-216ENST00000546260 TPM2P07951 284 aa13.35□□□□□ -0.27
SOD2-216ENST00000546260 NACADO15069 1562 aa13.34□□□□□ -0.27
SOD2-216ENST00000546260 BBXQ8WY36 941 aaPredicted RBP13.34□□□□□ -0.27
SOD2-216ENST00000546260 PDCL3Q9H2J4 239 aa13.34□□□□□ -0.27
SOD2-216ENST00000546260 PRDM10Q9NQV6 1147 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms