RNA–Protein interactions for RNA: ENST00000546017.5

GABARAPL1-218, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 2 BASIC

Gene GABARAPL1, Length 2,294 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-218ENST00000546017 IFT140Q96RY7 1462 aa23.28■■□□□ 1.32
GABARAPL1-218ENST00000546017 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.26■■□□□ 1.31
GABARAPL1-218ENST00000546017 PBRM1Q86U86 1689 aa23.26■■□□□ 1.31
GABARAPL1-218ENST00000546017 MAP3K1Q13233 1512 aa23.24■■□□□ 1.31
GABARAPL1-218ENST00000546017 KANK4Q5T7N3 995 aaPredicted RBP23.22■■□□□ 1.31
GABARAPL1-218ENST00000546017 AQRO60306 1485 aaKnown RBP eCLIP23.21■■□□□ 1.31
GABARAPL1-218ENST00000546017 GRIN2BQ13224 1484 aa23.21■■□□□ 1.31
GABARAPL1-218ENST00000546017 P3H3Q8IVL6 736 aa23.19■■□□□ 1.3
GABARAPL1-218ENST00000546017 TIAM1Q13009 1591 aa23.18■■□□□ 1.3
GABARAPL1-218ENST00000546017 FHOD3Q2V2M9 1422 aa23.18■■□□□ 1.3
GABARAPL1-218ENST00000546017 ADAMTS12P58397 1594 aa23.17■■□□□ 1.3
GABARAPL1-218ENST00000546017 HNRNPUL2Q1KMD3 747 aaKnown RBP23.16■■□□□ 1.3
GABARAPL1-218ENST00000546017 PCF11O94913 1555 aaKnown RBP23.15■■□□□ 1.3
GABARAPL1-218ENST00000546017 THOC2Q8NI27 1593 aaKnown RBP23.14■■□□□ 1.29
GABARAPL1-218ENST00000546017 FMN1Q68DA7 1419 aa23.14■■□□□ 1.29
GABARAPL1-218ENST00000546017 FYCO1Q9BQS8 1478 aa23.13■■□□□ 1.29
GABARAPL1-218ENST00000546017 SAMD9Q5K651 1589 aa23.12■■□□□ 1.29
GABARAPL1-218ENST00000546017 ZNF608Q9ULD9 1512 aaPredicted RBP23.11■■□□□ 1.29
GABARAPL1-218ENST00000546017 CASKIN1Q8WXD9 1431 aa23.11■■□□□ 1.29
GABARAPL1-218ENST00000546017 RRBP1Q9P2E9 1410 aaKnown RBP23.1■■□□□ 1.29
GABARAPL1-218ENST00000546017 CFAP43Q8NDM7 1665 aa23.1■■□□□ 1.29
GABARAPL1-218ENST00000546017 LRRC9Q6ZRR7 1453 aa23.08■■□□□ 1.29
GABARAPL1-218ENST00000546017 ATP1B4Q9UN42 357 aaPredicted RBP23.07■■□□□ 1.28
GABARAPL1-218ENST00000546017 EIF4G3O43432 1585 aaKnown RBP23.05■■□□□ 1.28
GABARAPL1-218ENST00000546017 IQGAP2Q13576 1575 aa23.03■■□□□ 1.28
GABARAPL1-218ENST00000546017 CCNB3Q8WWL7 1395 aa23.03■■□□□ 1.28
GABARAPL1-218ENST00000546017 SNAPC4Q5SXM2 1469 aa23.01■■□□□ 1.27
GABARAPL1-218ENST00000546017 MAGI1Q96QZ7 1491 aaPredicted RBP22.96■■□□□ 1.27
GABARAPL1-218ENST00000546017 GRIN2AQ12879 1464 aa22.92■■□□□ 1.26
GABARAPL1-218ENST00000546017 KIAA0586Q9BVV6 1533 aa22.91■■□□□ 1.26
GABARAPL1-218ENST00000546017 UGGT2Q9NYU1 1516 aa22.9■■□□□ 1.26
GABARAPL1-218ENST00000546017 PHLDB1Q86UU1 1377 aa22.89■■□□□ 1.26
GABARAPL1-218ENST00000546017 SYNJ2O15056 1496 aa22.87■■□□□ 1.25
GABARAPL1-218ENST00000546017 MTUS2Q5JR59 1369 aa22.86■■□□□ 1.25
GABARAPL1-218ENST00000546017 CHMP7Q8WUX9 453 aaPredicted RBP22.85■■□□□ 1.25
GABARAPL1-218ENST00000546017 CCDC18Q5T9S5 1454 aa22.84■■□□□ 1.25
GABARAPL1-218ENST00000546017 HECW1Q76N89 1606 aa22.84■■□□□ 1.25
GABARAPL1-218ENST00000546017 ITGAEP38570 1179 aa22.8■■□□□ 1.24
GABARAPL1-218ENST00000546017 LRRIQ1Q96JM4 1722 aa22.79■■□□□ 1.24
GABARAPL1-218ENST00000546017 EHBP1L1Q8N3D4 1523 aa22.79■■□□□ 1.24
GABARAPL1-218ENST00000546017 FAM50AQ14320 339 aaKnown RBP22.78■■□□□ 1.24
GABARAPL1-218ENST00000546017 KIAA0556O60303 1618 aa22.78■■□□□ 1.24
GABARAPL1-218ENST00000546017 CLSPNQ9HAW4 1339 aa22.77■■□□□ 1.24
GABARAPL1-218ENST00000546017 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.76■■□□□ 1.23
GABARAPL1-218ENST00000546017 FBLN2P98095 1184 aa22.75■■□□□ 1.23
GABARAPL1-218ENST00000546017 DISP1Q96F81 1524 aa22.74■■□□□ 1.23
GABARAPL1-218ENST00000546017 CEP170Q5SW79 1584 aa22.74■■□□□ 1.23
GABARAPL1-218ENST00000546017 SUPT6HQ7KZ85 1726 aaKnown RBP22.74■■□□□ 1.23
GABARAPL1-218ENST00000546017 DHX57Q6P158 1386 aaKnown RBP22.73■■□□□ 1.23
GABARAPL1-218ENST00000546017 FGD6Q6ZV73 1430 aa22.72■■□□□ 1.23
GABARAPL1-218ENST00000546017 EPRSP07814 1512 aaKnown RBP22.71■■□□□ 1.23
GABARAPL1-218ENST00000546017 NCOA2Q15596 1464 aa22.71■■□□□ 1.23
GABARAPL1-218ENST00000546017 NUP160Q12769 1436 aa22.71■■□□□ 1.23
GABARAPL1-218ENST00000546017 MYOM3Q5VTT5 1437 aa22.67■■□□□ 1.22
GABARAPL1-218ENST00000546017 SETD5Q9C0A6 1442 aa22.66■■□□□ 1.22
GABARAPL1-218ENST00000546017 CARMIL2Q6F5E8 1435 aa22.66■■□□□ 1.22
GABARAPL1-218ENST00000546017 RAB3GAP2Q9H2M9 1393 aa22.65■■□□□ 1.22
GABARAPL1-218ENST00000546017 MAGI3Q5TCQ9 1506 aa22.63■■□□□ 1.21
GABARAPL1-218ENST00000546017 CDK13Q14004 1512 aaKnown RBP22.63■■□□□ 1.21
GABARAPL1-218ENST00000546017 ARHGEF11O15085 1522 aa22.62■■□□□ 1.21
GABARAPL1-218ENST00000546017 RAPGEF6Q8TEU7 1601 aa22.62■■□□□ 1.21
GABARAPL1-218ENST00000546017 JPH4Q96JJ6 628 aa22.6■■□□□ 1.21
GABARAPL1-218ENST00000546017 NUP153P49790 1475 aaKnown RBP22.57■■□□□ 1.2
GABARAPL1-218ENST00000546017 CDK11AQ9UQ88 783 aaPredicted RBP22.56■■□□□ 1.2
GABARAPL1-218ENST00000546017 PTPN23Q9H3S7 1636 aa22.54■■□□□ 1.2
GABARAPL1-218ENST00000546017 ARID3CA6NKF2 412 aa22.54■■□□□ 1.2
GABARAPL1-218ENST00000546017 TCOF1Q13428 1488 aaKnown RBP22.5■■□□□ 1.19
GABARAPL1-218ENST00000546017 MIA2Q96PC5 1412 aa22.5■■□□□ 1.19
GABARAPL1-218ENST00000546017 ZNF316A6NFI3 1004 aaPredicted RBP22.5■■□□□ 1.19
GABARAPL1-218ENST00000546017 PLB1Q6P1J6 1458 aa22.47■■□□□ 1.19
GABARAPL1-218ENST00000546017 HFM1A2PYH4 1435 aa22.45■■□□□ 1.19
GABARAPL1-218ENST00000546017 CHD1O14646 1710 aa22.45■■□□□ 1.18
GABARAPL1-218ENST00000546017 PTPRKQ15262 1439 aa22.42■■□□□ 1.18
GABARAPL1-218ENST00000546017 MAPKBP1O60336 1514 aa22.42■■□□□ 1.18
GABARAPL1-218ENST00000546017 TROQ12816 1431 aaPredicted RBP22.42■■□□□ 1.18
GABARAPL1-218ENST00000546017 DIEXFQ68CQ4 756 aaKnown RBP22.42■■□□□ 1.18
GABARAPL1-218ENST00000546017 PRG4Q92954 1404 aaPredicted RBP22.41■■□□□ 1.18
GABARAPL1-218ENST00000546017 ABCA8O94911 1581 aa22.39■■□□□ 1.18
GABARAPL1-218ENST00000546017 NAIPQ13075 1403 aa22.36■■□□□ 1.17
GABARAPL1-218ENST00000546017 PTPRGP23470 1445 aa22.34■■□□□ 1.17
GABARAPL1-218ENST00000546017 AKNAQ7Z591 1439 aa22.34■■□□□ 1.17
GABARAPL1-218ENST00000546017 ADCY10Q96PN6 1610 aa22.33■■□□□ 1.17
GABARAPL1-218ENST00000546017 UACAQ9BZF9 1416 aa22.32■■□□□ 1.16
GABARAPL1-218ENST00000546017 SHROOM2Q13796 1616 aa22.32■■□□□ 1.16
GABARAPL1-218ENST00000546017 ITSN2Q9NZM3 1697 aa22.32■■□□□ 1.16
GABARAPL1-218ENST00000546017 PLEKHD1A6NEE1 506 aa22.3■■□□□ 1.16
GABARAPL1-218ENST00000546017 GCC2Q8IWJ2 1684 aa22.29■■□□□ 1.16
GABARAPL1-218ENST00000546017 ATP10BO94823 1461 aa22.28■■□□□ 1.16
GABARAPL1-218ENST00000546017 CHIC2Q9UKJ5 165 aa22.28■■□□□ 1.16
GABARAPL1-218ENST00000546017 DAPK1P53355 1430 aa22.26■■□□□ 1.15
GABARAPL1-218ENST00000546017 RRP7BPQ9NSQ0 103 aa22.26■■□□□ 1.15
GABARAPL1-218ENST00000546017 DNMT1P26358 1616 aaKnown RBP22.26■■□□□ 1.15
GABARAPL1-218ENST00000546017 CFDP1Q9UEE9 299 aaPredicted RBP22.26■■□□□ 1.15
GABARAPL1-218ENST00000546017 TIMELESSQ9UNS1 1208 aa22.26■■□□□ 1.15
GABARAPL1-218ENST00000546017 KIF14Q15058 1648 aa22.25■■□□□ 1.15
GABARAPL1-218ENST00000546017 ACIN1Q9UKV3 1341 aaKnown RBP22.24■■□□□ 1.15
GABARAPL1-218ENST00000546017 GPATCH8Q9UKJ3 1502 aaKnown RBP22.23■■□□□ 1.15
GABARAPL1-218ENST00000546017 ROCK1Q13464 1354 aa22.23■■□□□ 1.15
GABARAPL1-218ENST00000546017 CAMSAP2Q08AD1 1489 aa22.22■■□□□ 1.15
GABARAPL1-218ENST00000546017 NEUROD1Q13562 356 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms