RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 AEBP2Q6ZN18 517 aaPredicted RBP29.75■■■□□ 2.35
CPSF7-225ENST00000545934 CUL7Q14999 1698 aa29.69■■■□□ 2.34
CPSF7-225ENST00000545934 ADCY10Q96PN6 1610 aa29.67■■■□□ 2.34
CPSF7-225ENST00000545934 MAPKBP1O60336 1514 aa29.67■■■□□ 2.34
CPSF7-225ENST00000545934 ABCC10Q5T3U5 1492 aa29.62■■■□□ 2.33
CPSF7-225ENST00000545934 KIAA0586Q9BVV6 1533 aa29.62■■■□□ 2.33
CPSF7-225ENST00000545934 DIP2BQ9P265 1576 aa29.61■■■□□ 2.33
CPSF7-225ENST00000545934 IGF1RP08069 1367 aa29.59■■■□□ 2.33
CPSF7-225ENST00000545934 KIF27Q86VH2 1401 aa29.56■■■□□ 2.32
CPSF7-225ENST00000545934 NPM1P06748 294 aaKnown RBP eCLIP29.48■■■□□ 2.31
CPSF7-225ENST00000545934 FAM69CQ0P6D2 419 aa29.48■■■□□ 2.31
CPSF7-225ENST00000545934 TSPOAP1O95153 1857 aa29.44■■■□□ 2.3
CPSF7-225ENST00000545934 KDM6BO15054 1643 aa29.38■■■□□ 2.29
CPSF7-225ENST00000545934 CARMIL1Q5VZK9 1371 aa29.36■■■□□ 2.29
CPSF7-225ENST00000545934 IQGAP2Q13576 1575 aa29.34■■■□□ 2.29
CPSF7-225ENST00000545934 PTPRGP23470 1445 aa29.32■■■□□ 2.28
CPSF7-225ENST00000545934 ABCC2Q92887 1545 aa29.28■■■□□ 2.28
CPSF7-225ENST00000545934 PPRC1Q5VV67 1664 aaKnown RBP29.28■■■□□ 2.28
CPSF7-225ENST00000545934 TNIKQ9UKE5 1360 aa29.27■■■□□ 2.28
CPSF7-225ENST00000545934 CARMIL2Q6F5E8 1435 aa29.27■■■□□ 2.28
CPSF7-225ENST00000545934 GLI2P10070 1586 aa29.24■■■□□ 2.27
CPSF7-225ENST00000545934 UHRF1BP1LA0JNW5 1464 aa29.23■■■□□ 2.27
CPSF7-225ENST00000545934 DISP1Q96F81 1524 aa29.22■■■□□ 2.27
CPSF7-225ENST00000545934 ASXL2Q76L83 1435 aa29.18■■■□□ 2.26
CPSF7-225ENST00000545934 PLB1Q6P1J6 1458 aa29.17■■■□□ 2.26
CPSF7-225ENST00000545934 UGGT2Q9NYU1 1516 aa29.15■■■□□ 2.26
CPSF7-225ENST00000545934 UACAQ9BZF9 1416 aa29.13■■■□□ 2.25
CPSF7-225ENST00000545934 KDM4FA0A1W2PPD8 638 aa29.12■■■□□ 2.25
CPSF7-225ENST00000545934 RAPGEF2Q9Y4G8 1499 aa29.11■■■□□ 2.25
CPSF7-225ENST00000545934 TTBK1Q5TCY1 1321 aaPredicted RBP29.11■■■□□ 2.25
CPSF7-225ENST00000545934 KDM5BQ9UGL1 1544 aa29.1■■■□□ 2.25
CPSF7-225ENST00000545934 KIAA0556O60303 1618 aa29.1■■■□□ 2.25
CPSF7-225ENST00000545934 MAP3K4Q9Y6R4 1608 aa29.1■■■□□ 2.25
CPSF7-225ENST00000545934 ZCCHC11Q5TAX3 1644 aaKnown RBP29.09■■■□□ 2.25
CPSF7-225ENST00000545934 CTTNBP2Q8WZ74 1663 aa29.06■■■□□ 2.24
CPSF7-225ENST00000545934 EPRSP07814 1512 aaKnown RBP29.03■■■□□ 2.24
CPSF7-225ENST00000545934 COL17A1Q9UMD9 1497 aaPredicted RBP28.95■■■□□ 2.22
CPSF7-225ENST00000545934 TEX14Q8IWB6 1497 aa28.91■■■□□ 2.22
CPSF7-225ENST00000545934 ADGRL1O94910 1474 aa28.87■■■□□ 2.21
CPSF7-225ENST00000545934 WDR7Q9Y4E6 1490 aa28.86■■■□□ 2.21
CPSF7-225ENST00000545934 ABCA8O94911 1581 aa28.86■■■□□ 2.21
CPSF7-225ENST00000545934 CFAP43Q8NDM7 1665 aa28.84■■■□□ 2.21
CPSF7-225ENST00000545934 GOLGA3Q08378 1498 aa28.83■■■□□ 2.21
CPSF7-225ENST00000545934 PRXQ9BXM0 1461 aa28.78■■■□□ 2.2
CPSF7-225ENST00000545934 MAGI3Q5TCQ9 1506 aa28.75■■■□□ 2.19
CPSF7-225ENST00000545934 CD109Q6YHK3 1445 aa28.67■■■□□ 2.18
CPSF7-225ENST00000545934 HECW2Q9P2P5 1572 aa28.6■■■□□ 2.17
CPSF7-225ENST00000545934 SAMD9Q5K651 1589 aa28.59■■■□□ 2.17
CPSF7-225ENST00000545934 KCNH8Q96L42 1107 aa28.57■■■□□ 2.16
CPSF7-225ENST00000545934 KIF21BO75037 1637 aa28.56■■■□□ 2.16
CPSF7-225ENST00000545934 ABCA9Q8IUA7 1624 aa28.55■■■□□ 2.16
CPSF7-225ENST00000545934 ARAP3Q8WWN8 1544 aa28.54■■■□□ 2.16
CPSF7-225ENST00000545934 ATP10BO94823 1461 aa28.54■■■□□ 2.16
CPSF7-225ENST00000545934 RAPGEF6Q8TEU7 1601 aa28.49■■■□□ 2.15
CPSF7-225ENST00000545934 ILDR1Q86SU0 546 aaPredicted RBP28.45■■■□□ 2.14
CPSF7-225ENST00000545934 P3H3Q8IVL6 736 aa28.42■■■□□ 2.14
CPSF7-225ENST00000545934 PHLDB1Q86UU1 1377 aa28.39■■■□□ 2.14
CPSF7-225ENST00000545934 FAM9AQ8IZU1 332 aaPredicted RBP28.38■■■□□ 2.13
CPSF7-225ENST00000545934 CSRNP3Q8WYN3 585 aa28.38■■■□□ 2.13
CPSF7-225ENST00000545934 ADAMTSL3P82987 1691 aa28.38■■■□□ 2.13
CPSF7-225ENST00000545934 ARID3CA6NKF2 412 aa28.37■■■□□ 2.13
CPSF7-225ENST00000545934 NEO1Q92859 1461 aa28.35■■■□□ 2.13
CPSF7-225ENST00000545934 FRMPD1Q5SYB0 1578 aa28.35■■■□□ 2.13
CPSF7-225ENST00000545934 NUP153P49790 1475 aaKnown RBP28.34■■■□□ 2.13
CPSF7-225ENST00000545934 EEA1Q15075 1411 aa28.28■■■□□ 2.12
CPSF7-225ENST00000545934 BCORL1Q5H9F3 1711 aa28.28■■■□□ 2.12
CPSF7-225ENST00000545934 RICTORQ6R327 1708 aa28.26■■■□□ 2.11
CPSF7-225ENST00000545934 RAPGEF3O95398 923 aa28.23■■■□□ 2.11
CPSF7-225ENST00000545934 FHOD3Q2V2M9 1422 aa28.23■■■□□ 2.11
CPSF7-225ENST00000545934 PTPRMP28827 1452 aa28.22■■■□□ 2.11
CPSF7-225ENST00000545934 CFAP74Q9C0B2 1584 aa28.19■■■□□ 2.1
CPSF7-225ENST00000545934 EFCAB5A4FU69 1503 aa28.18■■■□□ 2.1
CPSF7-225ENST00000545934 MADDQ8WXG6 1647 aa28.18■■■□□ 2.1
CPSF7-225ENST00000545934 ARHGEF40Q8TER5 1519 aa28.18■■■□□ 2.1
CPSF7-225ENST00000545934 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.16■■■□□ 2.1
CPSF7-225ENST00000545934 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.15■■■□□ 2.1
CPSF7-225ENST00000545934 HNRNPUL2Q1KMD3 747 aaKnown RBP28.15■■■□□ 2.1
CPSF7-225ENST00000545934 TTC37Q6PGP7 1564 aa28.14■■■□□ 2.1
CPSF7-225ENST00000545934 DENND4BO75064 1496 aaPredicted RBP28.1■■■□□ 2.09
CPSF7-225ENST00000545934 AKNAQ7Z591 1439 aa28.09■■■□□ 2.09
CPSF7-225ENST00000545934 ZMYM4Q5VZL5 1548 aa28.09■■■□□ 2.09
CPSF7-225ENST00000545934 RIMS1Q86UR5 1692 aaKnown RBP28.09■■■□□ 2.09
CPSF7-225ENST00000545934 FANCAO15360 1455 aa28.08■■■□□ 2.09
CPSF7-225ENST00000545934 PLEKHD1A6NEE1 506 aa28.08■■■□□ 2.09
CPSF7-225ENST00000545934 SIGLEC1Q9BZZ2 1709 aa28.08■■■□□ 2.09
CPSF7-225ENST00000545934 RANGAP1P46060 587 aaPredicted RBP28.07■■■□□ 2.08
CPSF7-225ENST00000545934 PCF11O94913 1555 aaKnown RBP28.05■■■□□ 2.08
CPSF7-225ENST00000545934 CDK13Q14004 1512 aaKnown RBP28.02■■■□□ 2.08
CPSF7-225ENST00000545934 LMTK3Q96Q04 1460 aa28.02■■■□□ 2.08
CPSF7-225ENST00000545934 ZFYVE16Q7Z3T8 1539 aa27.98■■■□□ 2.07
CPSF7-225ENST00000545934 ARID4BQ4LE39 1312 aaPredicted RBP27.98■■■□□ 2.07
CPSF7-225ENST00000545934 HECW1Q76N89 1606 aa27.97■■■□□ 2.07
CPSF7-225ENST00000545934 MAGI2Q86UL8 1455 aa27.96■■■□□ 2.07
CPSF7-225ENST00000545934 MYO5CQ9NQX4 1742 aa27.96■■■□□ 2.07
CPSF7-225ENST00000545934 FER1L4A9Z1Z3 1794 aa27.94■■■□□ 2.06
CPSF7-225ENST00000545934 YEATS2Q9ULM3 1422 aa27.93■■■□□ 2.06
CPSF7-225ENST00000545934 PLCH2O75038 1416 aa27.92■■■□□ 2.06
CPSF7-225ENST00000545934 FBXO41Q8TF61 875 aa27.9■■■□□ 2.06
CPSF7-225ENST00000545934 POGZQ7Z3K3 1410 aa27.9■■■□□ 2.06
CPSF7-225ENST00000545934 LRRIQ1Q96JM4 1722 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms