RNA–Protein interactions for RNA: ENST00000545908.5

MTHFD1-202, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2 BASIC

Gene MTHFD1, Length 6,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-202ENST00000545908 RRP7BPQ9NSQ0 103 aa12.41□□□□□ -0.42
MTHFD1-202ENST00000545908 C14orf37Q86TY3 774 aa12.4□□□□□ -0.42
MTHFD1-202ENST00000545908 TOP2AP11388 1531 aaKnown RBP12.4□□□□□ -0.42
MTHFD1-202ENST00000545908 CEP162Q5TB80 1403 aa12.39□□□□□ -0.43
MTHFD1-202ENST00000545908 CFDP1Q9UEE9 299 aaPredicted RBP12.38□□□□□ -0.43
MTHFD1-202ENST00000545908 SMARCA4P51532 1647 aa12.37□□□□□ -0.43
MTHFD1-202ENST00000545908 ZBTB7CA1YPR0 619 aa12.37□□□□□ -0.43
MTHFD1-202ENST00000545908 MYO15BQ96JP2 1530 aa12.37□□□□□ -0.43
MTHFD1-202ENST00000545908 SOGA1O94964 1423 aa12.36□□□□□ -0.43
MTHFD1-202ENST00000545908 ABCC8Q09428 1581 aa12.35□□□□□ -0.43
MTHFD1-202ENST00000545908 CARMIL1Q5VZK9 1371 aa12.35□□□□□ -0.43
MTHFD1-202ENST00000545908 PLEKHG5O94827 1062 aa12.34□□□□□ -0.43
MTHFD1-202ENST00000545908 A0A0G2JS52 829 aa12.32□□□□□ -0.44
MTHFD1-202ENST00000545908 CARMIL2Q6F5E8 1435 aa12.31□□□□□ -0.44
MTHFD1-202ENST00000545908 CCNB3Q8WWL7 1395 aa12.29□□□□□ -0.44
MTHFD1-202ENST00000545908 HAP1P54257 671 aaPredicted RBP12.28□□□□□ -0.44
MTHFD1-202ENST00000545908 TNIKQ9UKE5 1360 aa12.28□□□□□ -0.44
MTHFD1-202ENST00000545908 FHAD1B1AJZ9 1412 aa12.27□□□□□ -0.44
MTHFD1-202ENST00000545908 MLECQ14165 292 aa12.25□□□□□ -0.45
MTHFD1-202ENST00000545908 ATAD2BQ9ULI0 1458 aa12.25□□□□□ -0.45
MTHFD1-202ENST00000545908 RGL3Q3MIN7 710 aa12.25□□□□□ -0.45
MTHFD1-202ENST00000545908 ACIN1Q9UKV3 1341 aaKnown RBP12.25□□□□□ -0.45
MTHFD1-202ENST00000545908 CADPSQ9ULU8 1353 aa12.25□□□□□ -0.45
MTHFD1-202ENST00000545908 KANK1Q14678 1352 aa12.25□□□□□ -0.45
MTHFD1-202ENST00000545908 TDRD9Q8NDG6 1382 aaKnown RBP12.24□□□□□ -0.45
MTHFD1-202ENST00000545908 WDR43Q15061 677 aaKnown RBP eCLIP12.23□□□□□ -0.45
MTHFD1-202ENST00000545908 FANCD2Q9BXW9 1451 aa12.21□□□□□ -0.45
MTHFD1-202ENST00000545908 TMC1Q8TDI8 760 aa12.21□□□□□ -0.45
MTHFD1-202ENST00000545908 EIF5BO60841 1220 aaKnown RBP12.21□□□□□ -0.45
MTHFD1-202ENST00000545908 DDX10Q13206 875 aaKnown RBP12.19□□□□□ -0.46
MTHFD1-202ENST00000545908 FAM9BQ8IZU0 186 aa12.19□□□□□ -0.46
MTHFD1-202ENST00000545908 SALL2Q9Y467 1007 aaPredicted RBP12.18□□□□□ -0.46
MTHFD1-202ENST00000545908 RTL5Q5HYW3 569 aaPredicted RBP12.16□□□□□ -0.46
MTHFD1-202ENST00000545908 POGKQ9P215 609 aa12.15□□□□□ -0.46
MTHFD1-202ENST00000545908 ARHGAP35Q9NRY4 1499 aa12.15□□□□□ -0.46
MTHFD1-202ENST00000545908 EIF4G2P78344 907 aaKnown RBP eCLIP12.14□□□□□ -0.47
MTHFD1-202ENST00000545908 HDGFP51858 240 aaKnown RBP12.14□□□□□ -0.47
MTHFD1-202ENST00000545908 NPM2Q86SE8 214 aaKnown RBP12.13□□□□□ -0.47
MTHFD1-202ENST00000545908 LMOD2Q6P5Q4 547 aa12.13□□□□□ -0.47
MTHFD1-202ENST00000545908 HIRIP3Q9BW71 556 aaPredicted RBP12.11□□□□□ -0.47
MTHFD1-202ENST00000545908 RAPGEF2Q9Y4G8 1499 aa12.11□□□□□ -0.47
MTHFD1-202ENST00000545908 HNRNPUQ00839 825 aaKnown RBP eCLIP12.1□□□□□ -0.47
MTHFD1-202ENST00000545908 CDCA8Q53HL2 280 aa12.1□□□□□ -0.47
MTHFD1-202ENST00000545908 FMN1Q68DA7 1419 aa12.09□□□□□ -0.47
MTHFD1-202ENST00000545908 GGT6Q6P531 493 aa12.09□□□□□ -0.47
MTHFD1-202ENST00000545908 CC2D2AQ9P2K1 1620 aa12.09□□□□□ -0.47
MTHFD1-202ENST00000545908 CARD11Q9BXL7 1154 aa12.09□□□□□ -0.47
MTHFD1-202ENST00000545908 PRDM2Q13029 1718 aa12.08□□□□□ -0.48
MTHFD1-202ENST00000545908 PPM1GO15355 546 aaPredicted RBP12.08□□□□□ -0.48
MTHFD1-202ENST00000545908 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.06□□□□□ -0.48
MTHFD1-202ENST00000545908 CFAP53Q96M91 514 aa12.06□□□□□ -0.48
MTHFD1-202ENST00000545908 MRS2Q9HD23 443 aa12.06□□□□□ -0.48
MTHFD1-202ENST00000545908 OSCARQ8IYS5 282 aa12.05□□□□□ -0.48
MTHFD1-202ENST00000545908 EFCAB2Q5VUJ9 269 aa12.05□□□□□ -0.48
MTHFD1-202ENST00000545908 KNSTRNQ9Y448 316 aa12.04□□□□□ -0.48
MTHFD1-202ENST00000545908 GTF3C3Q9Y5Q9 886 aa12.04□□□□□ -0.48
MTHFD1-202ENST00000545908 JPH4Q96JJ6 628 aa12.03□□□□□ -0.48
MTHFD1-202ENST00000545908 ARXQ96QS3 562 aa12.03□□□□□ -0.48
MTHFD1-202ENST00000545908 FHOD3Q2V2M9 1422 aa12.02□□□□□ -0.49
MTHFD1-202ENST00000545908 CYB5RLQ6IPT4 315 aa12.02□□□□□ -0.49
MTHFD1-202ENST00000545908 CCDC18Q5T9S5 1454 aa12.01□□□□□ -0.49
MTHFD1-202ENST00000545908 FGD5Q6ZNL6 1462 aa12.01□□□□□ -0.49
MTHFD1-202ENST00000545908 GAPVD1Q14C86 1478 aa12□□□□□ -0.49
MTHFD1-202ENST00000545908 MYH16Q9H6N6 1097 aa12□□□□□ -0.49
MTHFD1-202ENST00000545908 VPS8Q8N3P4 1428 aa12□□□□□ -0.49
MTHFD1-202ENST00000545908 DCAF11Q8TEB1 546 aa11.99□□□□□ -0.49
MTHFD1-202ENST00000545908 HNRNPMP52272 730 aaKnown RBP eCLIP11.98□□□□□ -0.49
MTHFD1-202ENST00000545908 SRPK2P78362 688 aaKnown RBP11.97□□□□□ -0.49
MTHFD1-202ENST00000545908 STK26Q9P289 416 aa11.97□□□□□ -0.49
MTHFD1-202ENST00000545908 ANKRD30AQ9BXX3 1397 aa11.97□□□□□ -0.49
MTHFD1-202ENST00000545908 RAD54L2Q9Y4B4 1467 aa11.97□□□□□ -0.49
MTHFD1-202ENST00000545908 SAFB2Q14151 953 aaKnown RBP eCLIP11.96□□□□□ -0.49
MTHFD1-202ENST00000545908 SIN3AQ96ST3 1273 aa11.95□□□□□ -0.5
MTHFD1-202ENST00000545908 TNNT2P45379 298 aaPredicted RBP11.95□□□□□ -0.5
MTHFD1-202ENST00000545908 UPF2Q9HAU5 1272 aaKnown RBP11.95□□□□□ -0.5
MTHFD1-202ENST00000545908 PTPRGP23470 1445 aa11.95□□□□□ -0.5
MTHFD1-202ENST00000545908 FKBP8Q14318 412 aa11.95□□□□□ -0.5
MTHFD1-202ENST00000545908 SETD5Q9C0A6 1442 aa11.95□□□□□ -0.5
MTHFD1-202ENST00000545908 SPAG9O60271 1321 aaKnown RBP11.95□□□□□ -0.5
MTHFD1-202ENST00000545908 NPHP1O15259 732 aa11.95□□□□□ -0.5
MTHFD1-202ENST00000545908 LAS1LQ9Y4W2 734 aaKnown RBP11.95□□□□□ -0.5
MTHFD1-202ENST00000545908 ANP32AP39687 249 aaKnown RBP11.95□□□□□ -0.5
MTHFD1-202ENST00000545908 MRC2Q9UBG0 1479 aa11.95□□□□□ -0.5
MTHFD1-202ENST00000545908 MAPK8IP3Q9UPT6 1336 aa11.95□□□□□ -0.5
MTHFD1-202ENST00000545908 NCAPD3P42695 1498 aa11.94□□□□□ -0.5
MTHFD1-202ENST00000545908 HSP90AA1P07900 732 aaKnown RBP11.94□□□□□ -0.5
MTHFD1-202ENST00000545908 TMF1P82094 1093 aa11.94□□□□□ -0.5
MTHFD1-202ENST00000545908 KIF3BO15066 747 aa11.94□□□□□ -0.5
MTHFD1-202ENST00000545908 NUDCQ9Y266 331 aa11.94□□□□□ -0.5
MTHFD1-202ENST00000545908 EID1Q9Y6B2 187 aa11.93□□□□□ -0.5
MTHFD1-202ENST00000545908 CC2D1BQ5T0F9 858 aaKnown RBP11.93□□□□□ -0.5
MTHFD1-202ENST00000545908 AEBP2Q6ZN18 517 aaPredicted RBP11.93□□□□□ -0.5
MTHFD1-202ENST00000545908 PKD2Q13563 968 aa11.93□□□□□ -0.5
MTHFD1-202ENST00000545908 SOX12O15370 315 aa11.92□□□□□ -0.5
MTHFD1-202ENST00000545908 KANK4Q5T7N3 995 aaPredicted RBP11.92□□□□□ -0.5
MTHFD1-202ENST00000545908 GLIPR1L2Q4G1C9 344 aa11.91□□□□□ -0.5
MTHFD1-202ENST00000545908 WASHC2CQ9Y4E1 1318 aa11.91□□□□□ -0.5
MTHFD1-202ENST00000545908 PAK3O75914 559 aaPredicted RBP11.91□□□□□ -0.5
MTHFD1-202ENST00000545908 NUP155O75694 1391 aa11.9□□□□□ -0.5
MTHFD1-202ENST00000545908 AQRO60306 1485 aaKnown RBP eCLIP11.9□□□□□ -0.53e-9■■■■■ 30.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms