RNA–Protein interactions for RNA: ENST00000545848.5

LDHC-209, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-209ENST00000545848 NPM1P06748 294 aaKnown RBP eCLIP12.39□□□□□ -0.43
LDHC-209ENST00000545848 SMARCA4P51532 1647 aa12.39□□□□□ -0.43
LDHC-209ENST00000545848 ZRANB1Q9UGI0 708 aa12.37□□□□□ -0.43
LDHC-209ENST00000545848 MIER1Q8N108 512 aa12.35□□□□□ -0.43
LDHC-209ENST00000545848 PAK3O75914 559 aaPredicted RBP12.32□□□□□ -0.44
LDHC-209ENST00000545848 PLEKHG5O94827 1062 aa12.32□□□□□ -0.44
LDHC-209ENST00000545848 ZNF579Q8NAF0 562 aaKnown RBP12.32□□□□□ -0.44
LDHC-209ENST00000545848 MROH2BQ7Z745 1585 aa12.3□□□□□ -0.44
LDHC-209ENST00000545848 CLCN6P51797 869 aa12.28□□□□□ -0.44
LDHC-209ENST00000545848 PLCD3Q8N3E9 789 aa12.28□□□□□ -0.44
LDHC-209ENST00000545848 ATAD2BQ9ULI0 1458 aa12.25□□□□□ -0.45
LDHC-209ENST00000545848 FBXO3Q9UK99 471 aa12.23□□□□□ -0.45
LDHC-209ENST00000545848 WIZO95785 1651 aa12.22□□□□□ -0.45
LDHC-209ENST00000545848 BAZ1AQ9NRL2 1556 aaPredicted RBP12.22□□□□□ -0.45
LDHC-209ENST00000545848 PHF12Q96QT6 1004 aa12.21□□□□□ -0.45
LDHC-209ENST00000545848 PEG3Q9GZU2 1588 aa12.21□□□□□ -0.46
LDHC-209ENST00000545848 TSPYL2Q9H2G4 693 aaPredicted RBP12.19□□□□□ -0.46
LDHC-209ENST00000545848 HMGXB3Q12766 1538 aa12.18□□□□□ -0.46
LDHC-209ENST00000545848 NCAPD3P42695 1498 aa12.18□□□□□ -0.46
LDHC-209ENST00000545848 ZBTB47Q9UFB7 747 aaPredicted RBP12.17□□□□□ -0.46
LDHC-209ENST00000545848 GALR2O43603 387 aaPredicted RBP12.16□□□□□ -0.46
LDHC-209ENST00000545848 SMARCA2P51531 1590 aa12.15□□□□□ -0.46
LDHC-209ENST00000545848 POTEIP0CG38 1075 aa12.14□□□□□ -0.47
LDHC-209ENST00000545848 RASEFQ8IZ41 740 aa12.13□□□□□ -0.47
LDHC-209ENST00000545848 NESP48681 1621 aa12.12□□□□□ -0.47
LDHC-209ENST00000545848 DCBLD2Q96PD2 775 aa12.12□□□□□ -0.47
LDHC-209ENST00000545848 CCDC61Q9Y6R9 512 aa12.12□□□□□ -0.47
LDHC-209ENST00000545848 BAZ1BQ9UIG0 1483 aaKnown RBP12.09□□□□□ -0.47
LDHC-209ENST00000545848 VASPP50552 380 aaPredicted RBP12.08□□□□□ -0.48
LDHC-209ENST00000545848 NUBP1P53384 320 aa12.07□□□□□ -0.48
LDHC-209ENST00000545848 MS4A3Q96HJ5 214 aa12.05□□□□□ -0.48
LDHC-209ENST00000545848 KIF21AQ7Z4S6 1674 aa12.04□□□□□ -0.48
LDHC-209ENST00000545848 RSF1Q96T23 1441 aaPredicted RBP12.03□□□□□ -0.48
LDHC-209ENST00000545848 KIF12Q96FN5 646 aa12.02□□□□□ -0.49
LDHC-209ENST00000545848 FAM212AQ96EL1 285 aa12□□□□□ -0.49
LDHC-209ENST00000545848 THOC2Q8NI27 1593 aaKnown RBP11.98□□□□□ -0.49
LDHC-209ENST00000545848 KLHL34Q8N239 644 aa11.98□□□□□ -0.49
LDHC-209ENST00000545848 MAP3K13O43283 966 aa11.97□□□□□ -0.49
LDHC-209ENST00000545848 LHX8Q68G74 356 aa11.96□□□□□ -0.49
LDHC-209ENST00000545848 PLSCR2Q9NRY7 297 aa11.96□□□□□ -0.49
LDHC-209ENST00000545848 TOP2AP11388 1531 aaKnown RBP11.96□□□□□ -0.5
LDHC-209ENST00000545848 ASTLQ6HA08 431 aaPredicted RBP11.92□□□□□ -0.5
LDHC-209ENST00000545848 DCAF8Q5TAQ9 597 aa11.91□□□□□ -0.5
LDHC-209ENST00000545848 LAMC3Q9Y6N6 1575 aa11.91□□□□□ -0.5
LDHC-209ENST00000545848 ATMINO43313 823 aaPredicted RBP11.89□□□□□ -0.51
LDHC-209ENST00000545848 PELP1Q8IZL8 1130 aaKnown RBP11.89□□□□□ -0.51
LDHC-209ENST00000545848 IFNLR1Q8IU57 520 aaPredicted RBP11.88□□□□□ -0.51
LDHC-209ENST00000545848 SGIP1Q9BQI5 828 aa11.88□□□□□ -0.51
LDHC-209ENST00000545848 TRPC6Q9Y210 931 aa11.88□□□□□ -0.51
LDHC-209ENST00000545848 PCDHB13Q9Y5F0 798 aa11.88□□□□□ -0.51
LDHC-209ENST00000545848 PRDM2Q13029 1718 aa11.88□□□□□ -0.51
LDHC-209ENST00000545848 ERCC6Q03468 1493 aa11.85□□□□□ -0.51
LDHC-209ENST00000545848 BMP2KQ9NSY1 1161 aaPredicted RBP11.84□□□□□ -0.51
LDHC-209ENST00000545848 PYGBP11216 843 aa11.83□□□□□ -0.52
LDHC-209ENST00000545848 TIE1P35590 1138 aa11.83□□□□□ -0.52
LDHC-209ENST00000545848 ATN1P54259 1190 aaPredicted RBP11.83□□□□□ -0.52
LDHC-209ENST00000545848 GSE1Q14687 1217 aa11.82□□□□□ -0.52
LDHC-209ENST00000545848 IFNL1Q8IU54 200 aa11.82□□□□□ -0.52
LDHC-209ENST00000545848 CCDC88BA6NC98 1476 aa11.82□□□□□ -0.52
LDHC-209ENST00000545848 SLC39A7Q92504 469 aa11.8□□□□□ -0.52
LDHC-209ENST00000545848 SPOCK2Q92563 424 aa11.8□□□□□ -0.52
LDHC-209ENST00000545848 METRNQ9UJH8 293 aa11.8□□□□□ -0.52
LDHC-209ENST00000545848 CADPSQ9ULU8 1353 aa11.79□□□□□ -0.52
LDHC-209ENST00000545848 TTLL13PA6NNM8 815 aa11.78□□□□□ -0.52
LDHC-209ENST00000545848 C7P10643 843 aa11.78□□□□□ -0.52
LDHC-209ENST00000545848 CUX2O14529 1486 aa11.77□□□□□ -0.52
LDHC-209ENST00000545848 CFTRP13569 1480 aa11.76□□□□□ -0.53
LDHC-209ENST00000545848 WDR62O43379 1518 aa11.76□□□□□ -0.53
LDHC-209ENST00000545848 POTEB2H3BUK9 544 aa11.75□□□□□ -0.53
LDHC-209ENST00000545848 URB2Q14146 1524 aaKnown RBP11.73□□□□□ -0.53
LDHC-209ENST00000545848 FANCD2Q9BXW9 1451 aa11.73□□□□□ -0.53
LDHC-209ENST00000545848 TRIM35Q9UPQ4 493 aa11.72□□□□□ -0.53
LDHC-209ENST00000545848 MRC2Q9UBG0 1479 aa11.71□□□□□ -0.53
LDHC-209ENST00000545848 TMEM106CQ9BVX2 250 aa11.71□□□□□ -0.53
LDHC-209ENST00000545848 CIZ1Q9ULV3 898 aaPredicted RBP11.71□□□□□ -0.53
LDHC-209ENST00000545848 PCDHB8Q9UN66 801 aa11.71□□□□□ -0.53
LDHC-209ENST00000545848 CEP164Q9UPV0 1460 aa11.69□□□□□ -0.54
LDHC-209ENST00000545848 PDS5BQ9NTI5 1447 aa11.69□□□□□ -0.54
LDHC-209ENST00000545848 CHRM1P11229 460 aaPredicted RBP11.68□□□□□ -0.54
LDHC-209ENST00000545848 ZNF467Q7Z7K2 595 aaPredicted RBP11.66□□□□□ -0.54
LDHC-209ENST00000545848 OTUD5Q96G74 571 aa11.66□□□□□ -0.54
LDHC-209ENST00000545848 POTEFA5A3E0 1075 aa11.65□□□□□ -0.54
LDHC-209ENST00000545848 SEC24BO95487 1268 aa11.63□□□□□ -0.55
LDHC-209ENST00000545848 IER5LQ5T953 404 aa11.63□□□□□ -0.55
LDHC-209ENST00000545848 POTEJP0CG39 1038 aa11.62□□□□□ -0.55
LDHC-209ENST00000545848 COLQQ9Y215 455 aaPredicted RBP11.62□□□□□ -0.55
LDHC-209ENST00000545848 TOPBP1Q92547 1522 aa11.59□□□□□ -0.55
LDHC-209ENST00000545848 ZNF608Q9ULD9 1512 aaPredicted RBP11.56□□□□□ -0.56
LDHC-209ENST00000545848 SUPT5HO00267 1087 aaKnown RBP11.56□□□□□ -0.56
LDHC-209ENST00000545848 DNMBPQ6XZF7 1577 aa11.56□□□□□ -0.56
LDHC-209ENST00000545848 TARBP1Q13395 1621 aaKnown RBP11.56□□□□□ -0.56
LDHC-209ENST00000545848 MAMSTRQ6ZN01 415 aa11.55□□□□□ -0.56
LDHC-209ENST00000545848 TRIM41Q8WV44 630 aa11.55□□□□□ -0.56
LDHC-209ENST00000545848 CUX1P39880 1505 aa11.55□□□□□ -0.56
LDHC-209ENST00000545848 PSEN1P49768 467 aa11.54□□□□□ -0.56
LDHC-209ENST00000545848 WDR97A6NE52 1622 aa11.53□□□□□ -0.56
LDHC-209ENST00000545848 PLCG2P16885 1265 aa11.53□□□□□ -0.56
LDHC-209ENST00000545848 IRX5P78411 483 aaPredicted RBP11.53□□□□□ -0.56
LDHC-209ENST00000545848 SCUBE2Q9NQ36 999 aa11.53□□□□□ -0.56
LDHC-209ENST00000545848 EIF4G3O43432 1585 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms