RNA–Protein interactions for RNA: ENST00000545620.5

SMAD5-212, Transcript of SMAD family member 5, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD5, Length 6,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-212ENST00000545620 SNAPC4Q5SXM2 1469 aa7.36□□□□□ -1.23
SMAD5-212ENST00000545620 CARMIL1Q5VZK9 1371 aa7.36□□□□□ -1.23
SMAD5-212ENST00000545620 SAMD9Q5K651 1589 aa7.35□□□□□ -1.23
SMAD5-212ENST00000545620 FHOD3Q2V2M9 1422 aa7.35□□□□□ -1.23
SMAD5-212ENST00000545620 P3H3Q8IVL6 736 aa7.34□□□□□ -1.24
SMAD5-212ENST00000545620 PHLDB1Q86UU1 1377 aa7.33□□□□□ -1.24
SMAD5-212ENST00000545620 WDR62O43379 1518 aa7.33□□□□□ -1.24
SMAD5-212ENST00000545620 PTPRKQ15262 1439 aa7.32□□□□□ -1.24
SMAD5-212ENST00000545620 TIAM1Q13009 1591 aa7.32□□□□□ -1.24
SMAD5-212ENST00000545620 CFAP43Q8NDM7 1665 aa7.32□□□□□ -1.24
SMAD5-212ENST00000545620 EIF4G3O43432 1585 aaKnown RBP7.32□□□□□ -1.24
SMAD5-212ENST00000545620 ADAMTS12P58397 1594 aa7.31□□□□□ -1.24
SMAD5-212ENST00000545620 GAPVD1Q14C86 1478 aa7.31□□□□□ -1.24
SMAD5-212ENST00000545620 KDM6BO15054 1643 aa7.3□□□□□ -1.24
SMAD5-212ENST00000545620 DENND4BO75064 1496 aaPredicted RBP7.3□□□□□ -1.24
SMAD5-212ENST00000545620 CUL7Q14999 1698 aa7.3□□□□□ -1.24
SMAD5-212ENST00000545620 CEP170Q5SW79 1584 aa7.29□□□□□ -1.24
SMAD5-212ENST00000545620 MAPKBP1O60336 1514 aa7.28□□□□□ -1.24
SMAD5-212ENST00000545620 RRBP1Q9P2E9 1410 aaKnown RBP7.28□□□□□ -1.24
SMAD5-212ENST00000545620 DISP1Q96F81 1524 aa7.28□□□□□ -1.24
SMAD5-212ENST00000545620 PDS5BQ9NTI5 1447 aa7.27□□□□□ -1.25
SMAD5-212ENST00000545620 HNRNPUL2Q1KMD3 747 aaKnown RBP7.27□□□□□ -1.25
SMAD5-212ENST00000545620 LRRC9Q6ZRR7 1453 aa7.27□□□□□ -1.25
SMAD5-212ENST00000545620 GRIN2BQ13224 1484 aa7.26□□□□□ -1.25
SMAD5-212ENST00000545620 MRC2Q9UBG0 1479 aa7.26□□□□□ -1.25
SMAD5-212ENST00000545620 ERCC6L2Q5T890 1561 aa7.25□□□□□ -1.25
SMAD5-212ENST00000545620 ARHGEF11O15085 1522 aa7.24□□□□□ -1.25
SMAD5-212ENST00000545620 CDK13Q14004 1512 aaKnown RBP7.24□□□□□ -1.25
SMAD5-212ENST00000545620 DHX57Q6P158 1386 aaKnown RBP7.24□□□□□ -1.25
SMAD5-212ENST00000545620 KDM5BQ9UGL1 1544 aa7.23□□□□□ -1.25
SMAD5-212ENST00000545620 MAP3K1Q13233 1512 aa7.19□□□□□ -1.26
SMAD5-212ENST00000545620 CASKIN1Q8WXD9 1431 aa7.19□□□□□ -1.26
SMAD5-212ENST00000545620 IQGAP2Q13576 1575 aa7.19□□□□□ -1.26
SMAD5-212ENST00000545620 SLC24A1O60721 1099 aa7.18□□□□□ -1.26
SMAD5-212ENST00000545620 SUPT6HQ7KZ85 1726 aaKnown RBP7.18□□□□□ -1.26
SMAD5-212ENST00000545620 KIAA0556O60303 1618 aa7.18□□□□□ -1.26
SMAD5-212ENST00000545620 NUP153P49790 1475 aaKnown RBP7.18□□□□□ -1.26
SMAD5-212ENST00000545620 KIF14Q15058 1648 aa7.18□□□□□ -1.26
SMAD5-212ENST00000545620 CHD1O14646 1710 aa7.18□□□□□ -1.26
SMAD5-212ENST00000545620 GRIN2AQ12879 1464 aa7.17□□□□□ -1.26
SMAD5-212ENST00000545620 ARID3CA6NKF2 412 aa7.17□□□□□ -1.26
SMAD5-212ENST00000545620 FYCO1Q9BQS8 1478 aa7.17□□□□□ -1.26
SMAD5-212ENST00000545620 PLB1Q6P1J6 1458 aa7.17□□□□□ -1.26
SMAD5-212ENST00000545620 EFCAB5A4FU69 1503 aa7.16□□□□□ -1.26
SMAD5-212ENST00000545620 UGGT2Q9NYU1 1516 aa7.16□□□□□ -1.26
SMAD5-212ENST00000545620 FHAD1B1AJZ9 1412 aa7.16□□□□□ -1.26
SMAD5-212ENST00000545620 CCNB3Q8WWL7 1395 aa7.16□□□□□ -1.26
SMAD5-212ENST00000545620 ZNF644Q9H582 1327 aaPredicted RBP7.15□□□□□ -1.27
SMAD5-212ENST00000545620 RAB3GAP2Q9H2M9 1393 aa7.15□□□□□ -1.27
SMAD5-212ENST00000545620 IFT140Q96RY7 1462 aa7.15□□□□□ -1.27
SMAD5-212ENST00000545620 CCER1Q8TC90 406 aaPredicted RBP7.14□□□□□ -1.27
SMAD5-212ENST00000545620 EPRSP07814 1512 aaKnown RBP7.14□□□□□ -1.27
SMAD5-212ENST00000545620 NCOA2Q15596 1464 aa7.13□□□□□ -1.27
SMAD5-212ENST00000545620 ITGAEP38570 1179 aa7.13□□□□□ -1.27
SMAD5-212ENST00000545620 NUP160Q12769 1436 aa7.12□□□□□ -1.27
SMAD5-212ENST00000545620 SIN3AQ96ST3 1273 aa7.12□□□□□ -1.27
SMAD5-212ENST00000545620 FGD6Q6ZV73 1430 aa7.11□□□□□ -1.27
SMAD5-212ENST00000545620 PTPN23Q9H3S7 1636 aa7.1□□□□□ -1.27
SMAD5-212ENST00000545620 PRG4Q92954 1404 aaPredicted RBP7.1□□□□□ -1.27
SMAD5-212ENST00000545620 CDC42BPAQ5VT25 1732 aa7.1□□□□□ -1.27
SMAD5-212ENST00000545620 KIAA0586Q9BVV6 1533 aa7.09□□□□□ -1.27
SMAD5-212ENST00000545620 NAIPQ13075 1403 aa7.09□□□□□ -1.27
SMAD5-212ENST00000545620 ABCA8O94911 1581 aa7.09□□□□□ -1.27
SMAD5-212ENST00000545620 RAPGEF6Q8TEU7 1601 aa7.09□□□□□ -1.27
SMAD5-212ENST00000545620 SHROOM2Q13796 1616 aa7.09□□□□□ -1.27
SMAD5-212ENST00000545620 ERCC6Q03468 1493 aa7.09□□□□□ -1.27
SMAD5-212ENST00000545620 KCNH8Q96L42 1107 aa7.09□□□□□ -1.27
SMAD5-212ENST00000545620 SYNJ2O15056 1496 aa7.09□□□□□ -1.28
SMAD5-212ENST00000545620 CDC42BPBQ9Y5S2 1711 aa7.08□□□□□ -1.28
SMAD5-212ENST00000545620 TCOF1Q13428 1488 aaKnown RBP7.06□□□□□ -1.28
SMAD5-212ENST00000545620 MAGI1Q96QZ7 1491 aaPredicted RBP7.06□□□□□ -1.28
SMAD5-212ENST00000545620 SCAF1Q9H7N4 1312 aaKnown RBP7.05□□□□□ -1.28
SMAD5-212ENST00000545620 GCC2Q8IWJ2 1684 aa7.05□□□□□ -1.28
SMAD5-212ENST00000545620 MYOM3Q5VTT5 1437 aa7.05□□□□□ -1.28
SMAD5-212ENST00000545620 FOXD1Q16676 465 aa7.05□□□□□ -1.28
SMAD5-212ENST00000545620 FMN1Q68DA7 1419 aa7.05□□□□□ -1.28
SMAD5-212ENST00000545620 ATP10BO94823 1461 aa7.05□□□□□ -1.28
SMAD5-212ENST00000545620 HIRIP3Q9BW71 556 aaPredicted RBP7.04□□□□□ -1.28
SMAD5-212ENST00000545620 ABCC10Q5T3U5 1492 aa7.04□□□□□ -1.28
SMAD5-212ENST00000545620 HECW1Q76N89 1606 aa7.04□□□□□ -1.28
SMAD5-212ENST00000545620 ATP1B4Q9UN42 357 aaPredicted RBP7.04□□□□□ -1.28
SMAD5-212ENST00000545620 MIER1Q8N108 512 aa7.04□□□□□ -1.28
SMAD5-212ENST00000545620 CROCC2H7BZ55 1655 aa7.04□□□□□ -1.28
SMAD5-212ENST00000545620 ADCY10Q96PN6 1610 aa7.04□□□□□ -1.28
SMAD5-212ENST00000545620 TTC37Q6PGP7 1564 aa7.04□□□□□ -1.28
SMAD5-212ENST00000545620 EHBP1L1Q8N3D4 1523 aa7.03□□□□□ -1.28
SMAD5-212ENST00000545620 CLASP1Q7Z460 1538 aa7.03□□□□□ -1.28
SMAD5-212ENST00000545620 ABCC5O15440 1437 aa7.03□□□□□ -1.28
SMAD5-212ENST00000545620 HFM1A2PYH4 1435 aa7.02□□□□□ -1.28
SMAD5-212ENST00000545620 SETD5Q9C0A6 1442 aa7.02□□□□□ -1.29
SMAD5-212ENST00000545620 ARHGEF12Q9NZN5 1544 aa7.02□□□□□ -1.29
SMAD5-212ENST00000545620 GPATCH8Q9UKJ3 1502 aaKnown RBP7.02□□□□□ -1.29
SMAD5-212ENST00000545620 NEUROD1Q13562 356 aa7.02□□□□□ -1.29
SMAD5-212ENST00000545620 DNMT1P26358 1616 aaKnown RBP7.01□□□□□ -1.29
SMAD5-212ENST00000545620 POLR3GLQ9BT43 218 aa7.01□□□□□ -1.29
SMAD5-212ENST00000545620 ABCC2Q92887 1545 aa7.01□□□□□ -1.29
SMAD5-212ENST00000545620 FAM50AQ14320 339 aaKnown RBP7.01□□□□□ -1.29
SMAD5-212ENST00000545620 JPH4Q96JJ6 628 aa7.01□□□□□ -1.29
SMAD5-212ENST00000545620 EIF5BO60841 1220 aaKnown RBP7□□□□□ -1.29
SMAD5-212ENST00000545620 CHIC2Q9UKJ5 165 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms