RNA–Protein interactions for RNA: ENST00000545367.5

NPIPB4-221, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 2

Gene NPIPB4, Length 846 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-221ENST00000545367 GRIN2AQ12879 1464 aa16.03■□□□□ 0.16
NPIPB4-221ENST00000545367 ABCA10Q8WWZ4 1543 aa16.01■□□□□ 0.15
NPIPB4-221ENST00000545367 MAPK8IP2Q13387 824 aaPredicted RBP16.01■□□□□ 0.15
NPIPB4-221ENST00000545367 DMRT2Q9Y5R5 561 aa15.97■□□□□ 0.15
NPIPB4-221ENST00000545367 NUP160Q12769 1436 aa15.96■□□□□ 0.15
NPIPB4-221ENST00000545367 DIP2BQ9P265 1576 aa15.92■□□□□ 0.14
NPIPB4-221ENST00000545367 CNKSR2Q8WXI2 1034 aa15.91■□□□□ 0.14
NPIPB4-221ENST00000545367 NCBP3Q53F19 620 aaKnown RBP15.9■□□□□ 0.14
NPIPB4-221ENST00000545367 KDM6BO15054 1643 aa15.9■□□□□ 0.14
NPIPB4-221ENST00000545367 RUSC2Q8N2Y8 1516 aa15.89■□□□□ 0.13
NPIPB4-221ENST00000545367 TSPOAP1O95153 1857 aa15.89■□□□□ 0.13
NPIPB4-221ENST00000545367 BIVM-ERCC5R4GMW8 1640 aa15.89■□□□□ 0.13
NPIPB4-221ENST00000545367 MAPKBP1O60336 1514 aa15.85■□□□□ 0.13
NPIPB4-221ENST00000545367 ADCY10Q96PN6 1610 aa15.85■□□□□ 0.13
NPIPB4-221ENST00000545367 FHAD1B1AJZ9 1412 aa15.84■□□□□ 0.13
NPIPB4-221ENST00000545367 ABCC10Q5T3U5 1492 aa15.83■□□□□ 0.12
NPIPB4-221ENST00000545367 ERICH3Q5RHP9 1530 aa15.83■□□□□ 0.12
NPIPB4-221ENST00000545367 TOP2BQ02880 1626 aa15.83■□□□□ 0.12
NPIPB4-221ENST00000545367 PRG4Q92954 1404 aaPredicted RBP15.82■□□□□ 0.12
NPIPB4-221ENST00000545367 WRNQ14191 1432 aaPredicted RBP eCLIP15.81■□□□□ 0.12
NPIPB4-221ENST00000545367 POTEDQ86YR6 584 aa15.78■□□□□ 0.12
NPIPB4-221ENST00000545367 KCNA4P22459 653 aa15.73■□□□□ 0.11
NPIPB4-221ENST00000545367 FAM69CQ0P6D2 419 aa15.73■□□□□ 0.11
NPIPB4-221ENST00000545367 ILDR1Q86SU0 546 aaPredicted RBP15.72■□□□□ 0.11
NPIPB4-221ENST00000545367 KDM4FA0A1W2PPD8 638 aa15.71■□□□□ 0.11
NPIPB4-221ENST00000545367 PPRC1Q5VV67 1664 aaKnown RBP15.7■□□□□ 0.1
NPIPB4-221ENST00000545367 ADGRL1O94910 1474 aa15.65■□□□□ 0.1
NPIPB4-221ENST00000545367 HECW2Q9P2P5 1572 aa15.65■□□□□ 0.1
NPIPB4-221ENST00000545367 RNF216Q9NWF9 866 aaPredicted RBP15.64■□□□□ 0.09
NPIPB4-221ENST00000545367 CUL7Q14999 1698 aa15.63■□□□□ 0.09
NPIPB4-221ENST00000545367 NPM1P06748 294 aaKnown RBP eCLIP15.63■□□□□ 0.09
NPIPB4-221ENST00000545367 JPH4Q96JJ6 628 aa15.63■□□□□ 0.09
NPIPB4-221ENST00000545367 HOXD11P31277 338 aaPredicted RBP15.61■□□□□ 0.09
NPIPB4-221ENST00000545367 NPM3O75607 178 aaKnown RBP15.59■□□□□ 0.09
NPIPB4-221ENST00000545367 GLI2P10070 1586 aa15.55■□□□□ 0.08
NPIPB4-221ENST00000545367 KIAA0586Q9BVV6 1533 aa15.55■□□□□ 0.08
NPIPB4-221ENST00000545367 MAP3K4Q9Y6R4 1608 aa15.54■□□□□ 0.08
NPIPB4-221ENST00000545367 ABCC2Q92887 1545 aa15.53■□□□□ 0.08
NPIPB4-221ENST00000545367 ASXL2Q76L83 1435 aa15.5■□□□□ 0.07
NPIPB4-221ENST00000545367 ZCCHC11Q5TAX3 1644 aaKnown RBP15.48■□□□□ 0.07
NPIPB4-221ENST00000545367 PLB1Q6P1J6 1458 aa15.47■□□□□ 0.07
NPIPB4-221ENST00000545367 IQGAP2Q13576 1575 aa15.47■□□□□ 0.07
NPIPB4-221ENST00000545367 TTBK1Q5TCY1 1321 aaPredicted RBP15.46■□□□□ 0.07
NPIPB4-221ENST00000545367 PTPRGP23470 1445 aa15.45■□□□□ 0.06
NPIPB4-221ENST00000545367 SUPT5HO00267 1087 aaKnown RBP15.45■□□□□ 0.06
NPIPB4-221ENST00000545367 COL17A1Q9UMD9 1497 aaPredicted RBP15.44■□□□□ 0.06
NPIPB4-221ENST00000545367 TEX14Q8IWB6 1497 aa15.43■□□□□ 0.06
NPIPB4-221ENST00000545367 KIF21BO75037 1637 aa15.43■□□□□ 0.06
NPIPB4-221ENST00000545367 EPRSP07814 1512 aaKnown RBP15.43■□□□□ 0.06
NPIPB4-221ENST00000545367 UHRF1BP1LA0JNW5 1464 aa15.41■□□□□ 0.06
NPIPB4-221ENST00000545367 TNIKQ9UKE5 1360 aa15.41■□□□□ 0.06
NPIPB4-221ENST00000545367 CARMIL2Q6F5E8 1435 aa15.41■□□□□ 0.06
NPIPB4-221ENST00000545367 KIF27Q86VH2 1401 aa15.39■□□□□ 0.05
NPIPB4-221ENST00000545367 KDM5BQ9UGL1 1544 aa15.37■□□□□ 0.05
NPIPB4-221ENST00000545367 IGF1RP08069 1367 aa15.36■□□□□ 0.05
NPIPB4-221ENST00000545367 KIAA0556O60303 1618 aa15.36■□□□□ 0.05
NPIPB4-221ENST00000545367 UACAQ9BZF9 1416 aa15.36■□□□□ 0.05
NPIPB4-221ENST00000545367 DISP1Q96F81 1524 aa15.36■□□□□ 0.05
NPIPB4-221ENST00000545367 CFAP43Q8NDM7 1665 aa15.35■□□□□ 0.05
NPIPB4-221ENST00000545367 WDR7Q9Y4E6 1490 aa15.32■□□□□ 0.04
NPIPB4-221ENST00000545367 CTTNBP2Q8WZ74 1663 aa15.31■□□□□ 0.04
NPIPB4-221ENST00000545367 UGGT2Q9NYU1 1516 aa15.29■□□□□ 0.04
NPIPB4-221ENST00000545367 CARMIL1Q5VZK9 1371 aa15.27■□□□□ 0.04
NPIPB4-221ENST00000545367 MAGI3Q5TCQ9 1506 aa15.23■□□□□ 0.03
NPIPB4-221ENST00000545367 ADAMTSL3P82987 1691 aa15.22■□□□□ 0.03
NPIPB4-221ENST00000545367 FBXO41Q8TF61 875 aa15.22■□□□□ 0.03
NPIPB4-221ENST00000545367 ABCA8O94911 1581 aa15.19■□□□□ 0.02
NPIPB4-221ENST00000545367 CD109Q6YHK3 1445 aa15.19■□□□□ 0.02
NPIPB4-221ENST00000545367 MADDQ8WXG6 1647 aa15.19■□□□□ 0.02
NPIPB4-221ENST00000545367 PCF11O94913 1555 aaKnown RBP15.18■□□□□ 0.02
NPIPB4-221ENST00000545367 BCORL1Q5H9F3 1711 aa15.17■□□□□ 0.02
NPIPB4-221ENST00000545367 PTPRMP28827 1452 aa15.16■□□□□ 0.02
NPIPB4-221ENST00000545367 RAPGEF2Q9Y4G8 1499 aa15.16■□□□□ 0.02
NPIPB4-221ENST00000545367 RIMS1Q86UR5 1692 aaKnown RBP15.16■□□□□ 0.02
NPIPB4-221ENST00000545367 FRMPD1Q5SYB0 1578 aa15.14■□□□□ 0.01
NPIPB4-221ENST00000545367 DCAF8L1A6NGE4 600 aa15.13■□□□□ 0.01
NPIPB4-221ENST00000545367 ABCA9Q8IUA7 1624 aa15.12■□□□□ 0.01
NPIPB4-221ENST00000545367 LMTK3Q96Q04 1460 aa15.12■□□□□ 0.01
NPIPB4-221ENST00000545367 ARAP3Q8WWN8 1544 aa15.12■□□□□ 0.01
NPIPB4-221ENST00000545367 ARHGEF40Q8TER5 1519 aa15.11■□□□□ 0.01
NPIPB4-221ENST00000545367 GOLGA3Q08378 1498 aa15.09■□□□□ 0.01
NPIPB4-221ENST00000545367 KCNH8Q96L42 1107 aa15.07■□□□□ 0
NPIPB4-221ENST00000545367 RICTORQ6R327 1708 aa15.04■□□□□ -0
NPIPB4-221ENST00000545367 FER1L4A9Z1Z3 1794 aa15.03■□□□□ -0
NPIPB4-221ENST00000545367 SIGLEC1Q9BZZ2 1709 aa15.02□□□□□ -0.01
NPIPB4-221ENST00000545367 ARID3CA6NKF2 412 aa15□□□□□ -0.01
NPIPB4-221ENST00000545367 SLC4A1APQ9BWU0 796 aaKnown RBP15□□□□□ -0.01
NPIPB4-221ENST00000545367 RAPGEF6Q8TEU7 1601 aa14.99□□□□□ -0.01
NPIPB4-221ENST00000545367 EHMT2Q96KQ7 1210 aa14.99□□□□□ -0.01
NPIPB4-221ENST00000545367 NEO1Q92859 1461 aa14.99□□□□□ -0.01
NPIPB4-221ENST00000545367 CFAP74Q9C0B2 1584 aa14.98□□□□□ -0.01
NPIPB4-221ENST00000545367 ATP10BO94823 1461 aa14.96□□□□□ -0.01
NPIPB4-221ENST00000545367 SAMD9Q5K651 1589 aa14.95□□□□□ -0.02
NPIPB4-221ENST00000545367 SPATA31D1Q6ZQQ2 1576 aa14.95□□□□□ -0.02
NPIPB4-221ENST00000545367 ARID4BQ4LE39 1312 aaPredicted RBP14.94□□□□□ -0.02
NPIPB4-221ENST00000545367 PREX1Q8TCU6 1659 aa14.94□□□□□ -0.02
NPIPB4-221ENST00000545367 RAPGEF3O95398 923 aa14.94□□□□□ -0.02
NPIPB4-221ENST00000545367 TTC37Q6PGP7 1564 aa14.94□□□□□ -0.02
NPIPB4-221ENST00000545367 PHLDB1Q86UU1 1377 aa14.93□□□□□ -0.02
NPIPB4-221ENST00000545367 ZMYM4Q5VZL5 1548 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms