RNA–Protein interactions for RNA: ENST00000545309.2

CTNNA3-205, Transcript of catenin alpha 3, humanhuman

TSL 5 BASIC

Gene CTNNA3, Length 555 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3-205ENST00000545309 NPM1P06748 294 aaKnown RBP eCLIP11.77□□□□□ -0.53
CTNNA3-205ENST00000545309 PLCD3Q8N3E9 789 aa11.76□□□□□ -0.53
CTNNA3-205ENST00000545309 RTN4Q9NQC3 1192 aaKnown RBP11.76□□□□□ -0.53
CTNNA3-205ENST00000545309 CD44P16070 742 aaKnown RBP11.74□□□□□ -0.53
CTNNA3-205ENST00000545309 EVX2Q03828 476 aa11.73□□□□□ -0.53
CTNNA3-205ENST00000545309 PAK3O75914 559 aaPredicted RBP11.68□□□□□ -0.54
CTNNA3-205ENST00000545309 MROH2BQ7Z745 1585 aa11.67□□□□□ -0.54
CTNNA3-205ENST00000545309 MNX1P50219 401 aaPredicted RBP11.67□□□□□ -0.54
CTNNA3-205ENST00000545309 ZBTB47Q9UFB7 747 aaPredicted RBP11.66□□□□□ -0.54
CTNNA3-205ENST00000545309 SUPT5HO00267 1087 aaKnown RBP11.64□□□□□ -0.55
CTNNA3-205ENST00000545309 ZRANB1Q9UGI0 708 aa11.64□□□□□ -0.55
CTNNA3-205ENST00000545309 RSF1Q96T23 1441 aaPredicted RBP11.62□□□□□ -0.55
CTNNA3-205ENST00000545309 AMER1Q5JTC6 1135 aaPredicted RBP11.62□□□□□ -0.55
CTNNA3-205ENST00000545309 EIF4G1Q04637 1599 aaKnown RBP11.61□□□□□ -0.55
CTNNA3-205ENST00000545309 SMARCA4P51532 1647 aa11.59□□□□□ -0.55
CTNNA3-205ENST00000545309 VASPP50552 380 aaPredicted RBP11.57□□□□□ -0.56
CTNNA3-205ENST00000545309 BAZ1AQ9NRL2 1556 aaPredicted RBP11.57□□□□□ -0.56
CTNNA3-205ENST00000545309 WIZO95785 1651 aa11.56□□□□□ -0.56
CTNNA3-205ENST00000545309 CUX2O14529 1486 aa11.56□□□□□ -0.56
CTNNA3-205ENST00000545309 GABBR2O75899 941 aa11.55□□□□□ -0.56
CTNNA3-205ENST00000545309 CLCN6P51797 869 aa11.55□□□□□ -0.56
CTNNA3-205ENST00000545309 ZNF579Q8NAF0 562 aaKnown RBP11.54□□□□□ -0.56
CTNNA3-205ENST00000545309 TSPYL2Q9H2G4 693 aaPredicted RBP11.54□□□□□ -0.56
CTNNA3-205ENST00000545309 KLHL34Q8N239 644 aa11.53□□□□□ -0.56
CTNNA3-205ENST00000545309 ATAD2BQ9ULI0 1458 aa11.47□□□□□ -0.57
CTNNA3-205ENST00000545309 RASEFQ8IZ41 740 aa11.46□□□□□ -0.57
CTNNA3-205ENST00000545309 PHF12Q96QT6 1004 aa11.46□□□□□ -0.57
CTNNA3-205ENST00000545309 NUBP1P53384 320 aa11.43□□□□□ -0.58
CTNNA3-205ENST00000545309 FAM212AQ96EL1 285 aa11.43□□□□□ -0.58
CTNNA3-205ENST00000545309 TRIM41Q8WV44 630 aa11.41□□□□□ -0.58
CTNNA3-205ENST00000545309 PEG3Q9GZU2 1588 aa11.41□□□□□ -0.58
CTNNA3-205ENST00000545309 CCDC61Q9Y6R9 512 aa11.4□□□□□ -0.58
CTNNA3-205ENST00000545309 DCAF8Q5TAQ9 597 aa11.38□□□□□ -0.59
CTNNA3-205ENST00000545309 DCBLD2Q96PD2 775 aa11.38□□□□□ -0.59
CTNNA3-205ENST00000545309 SMARCA2P51531 1590 aa11.37□□□□□ -0.59
CTNNA3-205ENST00000545309 TOP2AP11388 1531 aaKnown RBP11.36□□□□□ -0.59
CTNNA3-205ENST00000545309 GALR2O43603 387 aaPredicted RBP11.36□□□□□ -0.59
CTNNA3-205ENST00000545309 IFNLR1Q8IU57 520 aaPredicted RBP11.36□□□□□ -0.59
CTNNA3-205ENST00000545309 NCAPD3P42695 1498 aa11.36□□□□□ -0.59
CTNNA3-205ENST00000545309 BAZ1BQ9UIG0 1483 aaKnown RBP11.36□□□□□ -0.59
CTNNA3-205ENST00000545309 SPOCK2Q92563 424 aa11.34□□□□□ -0.59
CTNNA3-205ENST00000545309 KIF12Q96FN5 646 aa11.32□□□□□ -0.6
CTNNA3-205ENST00000545309 MS4A3Q96HJ5 214 aa11.32□□□□□ -0.6
CTNNA3-205ENST00000545309 GSE1Q14687 1217 aa11.31□□□□□ -0.6
CTNNA3-205ENST00000545309 CCDC88BA6NC98 1476 aa11.3□□□□□ -0.6
CTNNA3-205ENST00000545309 ERCC6Q03468 1493 aa11.3□□□□□ -0.6
CTNNA3-205ENST00000545309 HMGXB3Q12766 1538 aa11.3□□□□□ -0.6
CTNNA3-205ENST00000545309 MAP3K13O43283 966 aa11.28□□□□□ -0.6
CTNNA3-205ENST00000545309 CIZ1Q9ULV3 898 aaPredicted RBP11.25□□□□□ -0.61
CTNNA3-205ENST00000545309 PCDHB13Q9Y5F0 798 aa11.25□□□□□ -0.61
CTNNA3-205ENST00000545309 POTEIP0CG38 1075 aa11.24□□□□□ -0.61
CTNNA3-205ENST00000545309 SGIP1Q9BQI5 828 aa11.24□□□□□ -0.61
CTNNA3-205ENST00000545309 PYGBP11216 843 aa11.23□□□□□ -0.61
CTNNA3-205ENST00000545309 THOC2Q8NI27 1593 aaKnown RBP11.21□□□□□ -0.61
CTNNA3-205ENST00000545309 IFNL1Q8IU54 200 aa11.16□□□□□ -0.62
CTNNA3-205ENST00000545309 ATMINO43313 823 aaPredicted RBP11.15□□□□□ -0.62
CTNNA3-205ENST00000545309 TIE1P35590 1138 aa11.15□□□□□ -0.62
CTNNA3-205ENST00000545309 ASTLQ6HA08 431 aaPredicted RBP11.15□□□□□ -0.62
CTNNA3-205ENST00000545309 NESP48681 1621 aa11.14□□□□□ -0.63
CTNNA3-205ENST00000545309 TRPC6Q9Y210 931 aa11.13□□□□□ -0.63
CTNNA3-205ENST00000545309 CHRM1P11229 460 aaPredicted RBP11.12□□□□□ -0.63
CTNNA3-205ENST00000545309 BMP2KQ9NSY1 1161 aaPredicted RBP11.12□□□□□ -0.63
CTNNA3-205ENST00000545309 ZNF467Q7Z7K2 595 aaPredicted RBP11.11□□□□□ -0.63
CTNNA3-205ENST00000545309 PCDHB8Q9UN66 801 aa11.1□□□□□ -0.63
CTNNA3-205ENST00000545309 ATN1P54259 1190 aaPredicted RBP11.09□□□□□ -0.63
CTNNA3-205ENST00000545309 SLC39A7Q92504 469 aa11.09□□□□□ -0.63
CTNNA3-205ENST00000545309 LHX8Q68G74 356 aa11.08□□□□□ -0.64
CTNNA3-205ENST00000545309 PELP1Q8IZL8 1130 aaKnown RBP11.08□□□□□ -0.64
CTNNA3-205ENST00000545309 TTLL13PA6NNM8 815 aa11.07□□□□□ -0.64
CTNNA3-205ENST00000545309 TMEM106CQ9BVX2 250 aa11.07□□□□□ -0.64
CTNNA3-205ENST00000545309 CFTRP13569 1480 aa11.06□□□□□ -0.64
CTNNA3-205ENST00000545309 CADPSQ9ULU8 1353 aa11.06□□□□□ -0.64
CTNNA3-205ENST00000545309 C7P10643 843 aa11.06□□□□□ -0.64
CTNNA3-205ENST00000545309 METRNQ9UJH8 293 aa11.05□□□□□ -0.64
CTNNA3-205ENST00000545309 KIF21AQ7Z4S6 1674 aa11.04□□□□□ -0.64
CTNNA3-205ENST00000545309 ABCC8Q09428 1581 aa11.04□□□□□ -0.64
CTNNA3-205ENST00000545309 TRIM35Q9UPQ4 493 aa11.03□□□□□ -0.64
CTNNA3-205ENST00000545309 SEC24BO95487 1268 aa10.98□□□□□ -0.65
CTNNA3-205ENST00000545309 PSEN1P49768 467 aa10.98□□□□□ -0.65
CTNNA3-205ENST00000545309 PDAP1Q13442 181 aaKnown RBP10.98□□□□□ -0.65
CTNNA3-205ENST00000545309 GOLGA2Q08379 1002 aa10.97□□□□□ -0.65
CTNNA3-205ENST00000545309 LAMC3Q9Y6N6 1575 aa10.97□□□□□ -0.65
CTNNA3-205ENST00000545309 RIMBP3CA6NJZ7 1639 aa10.97□□□□□ -0.65
CTNNA3-205ENST00000545309 RIMBP3BA6NNM3 1639 aa10.97□□□□□ -0.65
CTNNA3-205ENST00000545309 RIMBP3Q9UFD9 1639 aa10.97□□□□□ -0.65
CTNNA3-205ENST00000545309 FANCD2Q9BXW9 1451 aa10.96□□□□□ -0.65
CTNNA3-205ENST00000545309 IER5LQ5T953 404 aa10.96□□□□□ -0.65
CTNNA3-205ENST00000545309 SYNJ1O43426 1573 aa10.93□□□□□ -0.66
CTNNA3-205ENST00000545309 PRDM2Q13029 1718 aa10.92□□□□□ -0.66
CTNNA3-205ENST00000545309 ECM2O94769 699 aaPredicted RBP10.92□□□□□ -0.66
CTNNA3-205ENST00000545309 CUX1P39880 1505 aa10.91□□□□□ -0.66
CTNNA3-205ENST00000545309 RIOK3O14730 519 aaKnown RBP10.91□□□□□ -0.66
CTNNA3-205ENST00000545309 WRNQ14191 1432 aaPredicted RBP eCLIP10.91□□□□□ -0.66
CTNNA3-205ENST00000545309 PLCG2P16885 1265 aa10.9□□□□□ -0.66
CTNNA3-205ENST00000545309 MKRN3Q13064 507 aaKnown RBP10.9□□□□□ -0.66
CTNNA3-205ENST00000545309 TAOK2Q9UL54 1235 aa10.89□□□□□ -0.67
CTNNA3-205ENST00000545309 URB2Q14146 1524 aaKnown RBP10.89□□□□□ -0.67
CTNNA3-205ENST00000545309 CEP164Q9UPV0 1460 aa10.88□□□□□ -0.67
CTNNA3-205ENST00000545309 POTEB2H3BUK9 544 aa10.88□□□□□ -0.67
CTNNA3-205ENST00000545309 PDS5BQ9NTI5 1447 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms