RNA–Protein interactions for RNA: ENST00000545137.5

STRA6-208, Transcript of stimulated by retinoic acid 6, humanhuman

TSL 2

Gene STRA6, Length 2,324 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRA6-208ENST00000545137 PPP4R2Q9NY27 417 aa20.18■□□□□ 0.82
STRA6-208ENST00000545137 IPO9Q96P70 1041 aaKnown RBP20.16■□□□□ 0.82
STRA6-208ENST00000545137 RSPH6AQ9H0K4 717 aa20.16■□□□□ 0.82
STRA6-208ENST00000545137 WASHC2CQ9Y4E1 1318 aa20.16■□□□□ 0.82
STRA6-208ENST00000545137 ANP32AP39687 249 aaKnown RBP20.14■□□□□ 0.81
STRA6-208ENST00000545137 IRX6P78412 446 aaPredicted RBP20.14■□□□□ 0.81
STRA6-208ENST00000545137 ZBTB47Q9UFB7 747 aaPredicted RBP20.14■□□□□ 0.81
STRA6-208ENST00000545137 USP35Q9P2H5 1018 aa20.11■□□□□ 0.81
STRA6-208ENST00000545137 DDX10Q13206 875 aaKnown RBP20.08■□□□□ 0.81
STRA6-208ENST00000545137 ZMYND15Q9H091 742 aa20.08■□□□□ 0.8
STRA6-208ENST00000545137 TIMELESSQ9UNS1 1208 aa20.06■□□□□ 0.8
STRA6-208ENST00000545137 NCAPD3P42695 1498 aa20.04■□□□□ 0.8
STRA6-208ENST00000545137 BRPF3Q9ULD4 1205 aa20.04■□□□□ 0.8
STRA6-208ENST00000545137 SOGA1O94964 1423 aa20.03■□□□□ 0.8
STRA6-208ENST00000545137 ANP32CO43423 234 aa20.02■□□□□ 0.8
STRA6-208ENST00000545137 EEA1Q15075 1411 aa20■□□□□ 0.79
STRA6-208ENST00000545137 VSIG10Q8N0Z9 540 aa20■□□□□ 0.79
STRA6-208ENST00000545137 PPP1R15AO75807 674 aaPredicted RBP19.99■□□□□ 0.79
STRA6-208ENST00000545137 RUSC2Q8N2Y8 1516 aa19.99■□□□□ 0.79
STRA6-208ENST00000545137 NEFMP07197 916 aa19.98■□□□□ 0.79
STRA6-208ENST00000545137 B4GALNT3Q6L9W6 998 aa19.96■□□□□ 0.79
STRA6-208ENST00000545137 ATAD2BQ9ULI0 1458 aa19.94■□□□□ 0.78
STRA6-208ENST00000545137 UBTFP17480 764 aaKnown RBP19.94■□□□□ 0.78
STRA6-208ENST00000545137 HNRNPUQ00839 825 aaKnown RBP eCLIP19.9■□□□□ 0.78
STRA6-208ENST00000545137 FAM43AQ8N2R8 423 aa19.89■□□□□ 0.77
STRA6-208ENST00000545137 GOLGA3Q08378 1498 aa19.88■□□□□ 0.77
STRA6-208ENST00000545137 GSE1Q14687 1217 aa19.87■□□□□ 0.77
STRA6-208ENST00000545137 PPM1GO15355 546 aaPredicted RBP19.87■□□□□ 0.77
STRA6-208ENST00000545137 HMGXB3Q12766 1538 aa19.87■□□□□ 0.77
STRA6-208ENST00000545137 PEG3Q9GZU2 1588 aa19.84■□□□□ 0.77
STRA6-208ENST00000545137 LAS1LQ9Y4W2 734 aaKnown RBP19.84■□□□□ 0.77
STRA6-208ENST00000545137 VPS8Q8N3P4 1428 aa19.83■□□□□ 0.77
STRA6-208ENST00000545137 DNAJC5Q9H3Z4 198 aa19.83■□□□□ 0.76
STRA6-208ENST00000545137 CUX2O14529 1486 aa19.81■□□□□ 0.76
STRA6-208ENST00000545137 CLIP1P30622 1438 aa19.79■□□□□ 0.76
STRA6-208ENST00000545137 ERCC6Q03468 1493 aa19.79■□□□□ 0.76
STRA6-208ENST00000545137 SYNJ1O43426 1573 aa19.78■□□□□ 0.76
STRA6-208ENST00000545137 WDR97A6NE52 1622 aa19.78■□□□□ 0.76
STRA6-208ENST00000545137 BAZ1BQ9UIG0 1483 aaKnown RBP19.73■□□□□ 0.75
STRA6-208ENST00000545137 MAPKBP1O60336 1514 aa19.7■□□□□ 0.74
STRA6-208ENST00000545137 RRP9O43818 475 aaKnown RBP19.7■□□□□ 0.74
STRA6-208ENST00000545137 HSP90AA2PQ14568 343 aaPredicted RBP19.7■□□□□ 0.74
STRA6-208ENST00000545137 FRAT1Q92837 279 aaPredicted RBP19.69■□□□□ 0.74
STRA6-208ENST00000545137 CEP164Q9UPV0 1460 aa19.68■□□□□ 0.74
STRA6-208ENST00000545137 NESP48681 1621 aa19.65■□□□□ 0.74
STRA6-208ENST00000545137 NPM2Q86SE8 214 aaKnown RBP19.64■□□□□ 0.74
STRA6-208ENST00000545137 A0A0U1RQG5 324 aaPredicted RBP19.61■□□□□ 0.73
STRA6-208ENST00000545137 RBM10P98175 930 aaKnown RBP19.6■□□□□ 0.73
STRA6-208ENST00000545137 FGD1P98174 961 aa19.6■□□□□ 0.73
STRA6-208ENST00000545137 RRBP1Q9P2E9 1410 aaKnown RBP19.6■□□□□ 0.73
STRA6-208ENST00000545137 AAMPQ13685 434 aa19.59■□□□□ 0.73
STRA6-208ENST00000545137 NFKBIBQ15653 356 aa19.59■□□□□ 0.73
STRA6-208ENST00000545137 HIRIP3Q9BW71 556 aaPredicted RBP19.59■□□□□ 0.73
STRA6-208ENST00000545137 HSP90AA1P07900 732 aaKnown RBP19.57■□□□□ 0.72
STRA6-208ENST00000545137 KIF21BO75037 1637 aa19.56■□□□□ 0.72
STRA6-208ENST00000545137 LAMC3Q9Y6N6 1575 aa19.56■□□□□ 0.72
STRA6-208ENST00000545137 SIN3AQ96ST3 1273 aa19.56■□□□□ 0.72
STRA6-208ENST00000545137 ZBED9Q6R2W3 1325 aa19.55■□□□□ 0.72
STRA6-208ENST00000545137 RANGAP1P46060 587 aaPredicted RBP19.54■□□□□ 0.72
STRA6-208ENST00000545137 DCAF11Q8TEB1 546 aa19.54■□□□□ 0.72
STRA6-208ENST00000545137 PDE4CQ08493 712 aa19.53■□□□□ 0.72
STRA6-208ENST00000545137 RAPGEF2Q9Y4G8 1499 aa19.53■□□□□ 0.72
STRA6-208ENST00000545137 DDRGK1Q96HY6 314 aa19.52■□□□□ 0.71
STRA6-208ENST00000545137 RAB3GAP2Q9H2M9 1393 aa19.51■□□□□ 0.71
STRA6-208ENST00000545137 RRAGDQ9NQL2 400 aaPredicted RBP19.51■□□□□ 0.71
STRA6-208ENST00000545137 NAP1L5Q96NT1 182 aaPredicted RBP19.5■□□□□ 0.71
STRA6-208ENST00000545137 TCERG1O14776 1098 aaKnown RBP19.48■□□□□ 0.71
STRA6-208ENST00000545137 PDS5BQ9NTI5 1447 aa19.47■□□□□ 0.71
STRA6-208ENST00000545137 THOC2Q8NI27 1593 aaKnown RBP19.47■□□□□ 0.71
STRA6-208ENST00000545137 PDE4AP27815 886 aa19.46■□□□□ 0.71
STRA6-208ENST00000545137 CCNB3Q8WWL7 1395 aa19.44■□□□□ 0.7
STRA6-208ENST00000545137 TOP2BQ02880 1626 aa19.44■□□□□ 0.7
STRA6-208ENST00000545137 BACH2Q9BYV9 841 aa19.43■□□□□ 0.7
STRA6-208ENST00000545137 RNF123Q5XPI4 1314 aa19.43■□□□□ 0.7
STRA6-208ENST00000545137 CADPSQ9ULU8 1353 aa19.42■□□□□ 0.7
STRA6-208ENST00000545137 PNNQ9H307 717 aaKnown RBP19.42■□□□□ 0.7
STRA6-208ENST00000545137 AKNAQ7Z591 1439 aa19.41■□□□□ 0.7
STRA6-208ENST00000545137 SMG6Q86US8 1419 aaKnown RBP19.41■□□□□ 0.7
STRA6-208ENST00000545137 MS4A1P11836 297 aa19.4■□□□□ 0.7
STRA6-208ENST00000545137 KIF21AQ7Z4S6 1674 aa19.36■□□□□ 0.69
STRA6-208ENST00000545137 CALD1Q05682 793 aaKnown RBP19.36■□□□□ 0.69
STRA6-208ENST00000545137 BIVM-ERCC5R4GMW8 1640 aa19.36■□□□□ 0.69
STRA6-208ENST00000545137 KANK4Q5T7N3 995 aaPredicted RBP19.35■□□□□ 0.69
STRA6-208ENST00000545137 FAM9BQ8IZU0 186 aa19.35■□□□□ 0.69
STRA6-208ENST00000545137 CENPJQ9HC77 1338 aaPredicted RBP19.35■□□□□ 0.69
STRA6-208ENST00000545137 CUX1P39880 1505 aa19.34■□□□□ 0.69
STRA6-208ENST00000545137 SETD5Q9C0A6 1442 aa19.34■□□□□ 0.69
STRA6-208ENST00000545137 PDIA4P13667 645 aaKnown RBP19.34■□□□□ 0.69
STRA6-208ENST00000545137 CLCN1P35523 988 aa19.34■□□□□ 0.69
STRA6-208ENST00000545137 CCDC184Q52MB2 194 aa19.33■□□□□ 0.68
STRA6-208ENST00000545137 PRDM4Q9UKN5 801 aa19.33■□□□□ 0.68
STRA6-208ENST00000545137 L1TD1Q5T7N2 865 aaKnown RBP19.31■□□□□ 0.68
STRA6-208ENST00000545137 NUDCQ9Y266 331 aa19.31■□□□□ 0.68
STRA6-208ENST00000545137 FRAT2O75474 233 aaPredicted RBP19.3■□□□□ 0.68
STRA6-208ENST00000545137 PDCL3Q9H2J4 239 aa19.28■□□□□ 0.68
STRA6-208ENST00000545137 MRC2Q9UBG0 1479 aa19.28■□□□□ 0.68
STRA6-208ENST00000545137 MRS2Q9HD23 443 aa19.28■□□□□ 0.68
STRA6-208ENST00000545137 PRXQ9BXM0 1461 aa19.26■□□□□ 0.67
STRA6-208ENST00000545137 BCL11BQ9C0K0 894 aaPredicted RBP19.25■□□□□ 0.67
STRA6-208ENST00000545137 FHAD1B1AJZ9 1412 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms