RNA–Protein interactions for RNA: ENST00000544665.7

ITGAM-202, Transcript of integrin subunit alpha M, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ITGAM, Length 4,718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAM-202ENST00000544665 CHMP7Q8WUX9 453 aaPredicted RBP19.48■□□□□ 0.71
ITGAM-202ENST00000544665 SIN3AQ96ST3 1273 aa19.47■□□□□ 0.71
ITGAM-202ENST00000544665 CHGAP10645 457 aaKnown RBP19.45■□□□□ 0.7
ITGAM-202ENST00000544665 BCL11AQ9H165 835 aa19.44■□□□□ 0.7
ITGAM-202ENST00000544665 CCNB3Q8WWL7 1395 aa19.39■□□□□ 0.69
ITGAM-202ENST00000544665 CCDC136Q96JN2 1154 aa19.39■□□□□ 0.69
ITGAM-202ENST00000544665 ZBTB47Q9UFB7 747 aaPredicted RBP19.37■□□□□ 0.69
ITGAM-202ENST00000544665 VPS8Q8N3P4 1428 aa19.37■□□□□ 0.69
ITGAM-202ENST00000544665 NEFMP07197 916 aa19.37■□□□□ 0.69
ITGAM-202ENST00000544665 KANK4Q5T7N3 995 aaPredicted RBP19.35■□□□□ 0.69
ITGAM-202ENST00000544665 WIZO95785 1651 aa19.34■□□□□ 0.69
ITGAM-202ENST00000544665 CARMIL1Q5VZK9 1371 aa19.33■□□□□ 0.69
ITGAM-202ENST00000544665 CUX2O14529 1486 aa19.33■□□□□ 0.68
ITGAM-202ENST00000544665 SENP3-EIF4A1A0A087X0R7 540 aa19.3■□□□□ 0.68
ITGAM-202ENST00000544665 PLEKHD1A6NEE1 506 aa19.3■□□□□ 0.68
ITGAM-202ENST00000544665 SLC24A1O60721 1099 aa19.29■□□□□ 0.68
ITGAM-202ENST00000544665 CFDP1Q9UEE9 299 aaPredicted RBP19.29■□□□□ 0.68
ITGAM-202ENST00000544665 RGL3Q3MIN7 710 aa19.26■□□□□ 0.67
ITGAM-202ENST00000544665 FHAD1B1AJZ9 1412 aa19.25■□□□□ 0.67
ITGAM-202ENST00000544665 NPM1P06748 294 aaKnown RBP eCLIP19.25■□□□□ 0.67
ITGAM-202ENST00000544665 KCNH8Q96L42 1107 aa19.25■□□□□ 0.67
ITGAM-202ENST00000544665 WDR43Q15061 677 aaKnown RBP eCLIP19.24■□□□□ 0.67
ITGAM-202ENST00000544665 SUPT16HQ9Y5B9 1047 aaKnown RBP19.23■□□□□ 0.67
ITGAM-202ENST00000544665 TOP2AP11388 1531 aaKnown RBP19.22■□□□□ 0.67
ITGAM-202ENST00000544665 STAG3Q9UJ98 1225 aa19.22■□□□□ 0.67
ITGAM-202ENST00000544665 NBR1Q14596 966 aa19.17■□□□□ 0.66
ITGAM-202ENST00000544665 SETD5Q9C0A6 1442 aa19.15■□□□□ 0.66
ITGAM-202ENST00000544665 CARD11Q9BXL7 1154 aa19.15■□□□□ 0.66
ITGAM-202ENST00000544665 ESF1Q9H501 851 aaKnown RBP19.15■□□□□ 0.66
ITGAM-202ENST00000544665 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.14■□□□□ 0.65
ITGAM-202ENST00000544665 SMARCA2P51531 1590 aa19.13■□□□□ 0.65
ITGAM-202ENST00000544665 RUSC2Q8N2Y8 1516 aa19.13■□□□□ 0.65
ITGAM-202ENST00000544665 TIMELESSQ9UNS1 1208 aa19.11■□□□□ 0.65
ITGAM-202ENST00000544665 RAB3GAP2Q9H2M9 1393 aa19.1■□□□□ 0.65
ITGAM-202ENST00000544665 SENP3Q9H4L4 574 aaPredicted RBP19.09■□□□□ 0.65
ITGAM-202ENST00000544665 RAPGEF2Q9Y4G8 1499 aa19.09■□□□□ 0.65
ITGAM-202ENST00000544665 EIF4G1Q04637 1599 aaKnown RBP19.08■□□□□ 0.64
ITGAM-202ENST00000544665 UPF2Q9HAU5 1272 aaKnown RBP19.08■□□□□ 0.64
ITGAM-202ENST00000544665 ARHGAP35Q9NRY4 1499 aa19.06■□□□□ 0.64
ITGAM-202ENST00000544665 PLPPR3Q6T4P5 718 aa19.05■□□□□ 0.64
ITGAM-202ENST00000544665 TDRD9Q8NDG6 1382 aaKnown RBP19.02■□□□□ 0.64
ITGAM-202ENST00000544665 FOXD1Q16676 465 aa19.02■□□□□ 0.64
ITGAM-202ENST00000544665 HSP90AA1P07900 732 aaKnown RBP19■□□□□ 0.63
ITGAM-202ENST00000544665 HSPA5P11021 654 aaKnown RBP19■□□□□ 0.63
ITGAM-202ENST00000544665 SMARCA4P51532 1647 aa19■□□□□ 0.63
ITGAM-202ENST00000544665 ATAD2BQ9ULI0 1458 aa18.99■□□□□ 0.63
ITGAM-202ENST00000544665 KNSTRNQ9Y448 316 aa18.99■□□□□ 0.63
ITGAM-202ENST00000544665 CCER2I3L3R5 266 aa18.98■□□□□ 0.63
ITGAM-202ENST00000544665 PPP4R2Q9NY27 417 aa18.97■□□□□ 0.63
ITGAM-202ENST00000544665 DCAF11Q8TEB1 546 aa18.96■□□□□ 0.63
ITGAM-202ENST00000544665 B4GALNT3Q6L9W6 998 aa18.94■□□□□ 0.62
ITGAM-202ENST00000544665 PPP1R15AO75807 674 aaPredicted RBP18.94■□□□□ 0.62
ITGAM-202ENST00000544665 ERCC6Q03468 1493 aa18.94■□□□□ 0.62
ITGAM-202ENST00000544665 ANP32EQ9BTT0 268 aa18.93■□□□□ 0.62
ITGAM-202ENST00000544665 FHOD3Q2V2M9 1422 aa18.93■□□□□ 0.62
ITGAM-202ENST00000544665 FMN1Q68DA7 1419 aa18.92■□□□□ 0.62
ITGAM-202ENST00000544665 CDCA8Q53HL2 280 aa18.92■□□□□ 0.62
ITGAM-202ENST00000544665 CC2D1BQ5T0F9 858 aaKnown RBP18.91■□□□□ 0.62
ITGAM-202ENST00000544665 CADPSQ9ULU8 1353 aa18.91■□□□□ 0.62
ITGAM-202ENST00000544665 DHX57Q6P158 1386 aaKnown RBP18.9■□□□□ 0.62
ITGAM-202ENST00000544665 MPHOSPH9Q99550 1183 aa18.9■□□□□ 0.62
ITGAM-202ENST00000544665 PKD2Q13563 968 aa18.89■□□□□ 0.62
ITGAM-202ENST00000544665 NEUROD2Q15784 382 aa18.86■□□□□ 0.61
ITGAM-202ENST00000544665 ARXQ96QS3 562 aa18.86■□□□□ 0.61
ITGAM-202ENST00000544665 PDS5BQ9NTI5 1447 aa18.83■□□□□ 0.61
ITGAM-202ENST00000544665 EIF5BO60841 1220 aaKnown RBP18.82■□□□□ 0.6
ITGAM-202ENST00000544665 CFAP53Q96M91 514 aa18.82■□□□□ 0.6
ITGAM-202ENST00000544665 L3MBTL2Q969R5 705 aa18.81■□□□□ 0.6
ITGAM-202ENST00000544665 TNNT2P45379 298 aaPredicted RBP18.8■□□□□ 0.6
ITGAM-202ENST00000544665 TMF1P82094 1093 aa18.79■□□□□ 0.6
ITGAM-202ENST00000544665 ANP32BQ92688 251 aaKnown RBP18.78■□□□□ 0.6
ITGAM-202ENST00000544665 DDRGK1Q96HY6 314 aa18.78■□□□□ 0.6
ITGAM-202ENST00000544665 PPM1GO15355 546 aaPredicted RBP18.77■□□□□ 0.59
ITGAM-202ENST00000544665 RBM19Q9Y4C8 960 aaKnown RBP18.77■□□□□ 0.59
ITGAM-202ENST00000544665 RGS3P49796 1198 aa18.75■□□□□ 0.59
ITGAM-202ENST00000544665 NUP155O75694 1391 aa18.75■□□□□ 0.59
ITGAM-202ENST00000544665 MYH16Q9H6N6 1097 aa18.74■□□□□ 0.59
ITGAM-202ENST00000544665 FRAT1Q92837 279 aaPredicted RBP18.73■□□□□ 0.59
ITGAM-202ENST00000544665 CARMIL2Q6F5E8 1435 aa18.71■□□□□ 0.59
ITGAM-202ENST00000544665 BECN1Q14457 450 aa18.71■□□□□ 0.58
ITGAM-202ENST00000544665 LAS1LQ9Y4W2 734 aaKnown RBP18.7■□□□□ 0.58
ITGAM-202ENST00000544665 NOP58Q9Y2X3 529 aaKnown RBP18.7■□□□□ 0.58
ITGAM-202ENST00000544665 FTSJ3Q8IY81 847 aaKnown RBP18.69■□□□□ 0.58
ITGAM-202ENST00000544665 ANKRD30AQ9BXX3 1397 aa18.68■□□□□ 0.58
ITGAM-202ENST00000544665 TSHZ2Q9NRE2 1034 aa18.68■□□□□ 0.58
ITGAM-202ENST00000544665 IGF1RP08069 1367 aa18.68■□□□□ 0.58
ITGAM-202ENST00000544665 PLEKHG5O94827 1062 aa18.67■□□□□ 0.58
ITGAM-202ENST00000544665 POGKQ9P215 609 aa18.66■□□□□ 0.58
ITGAM-202ENST00000544665 MAPK8IP3Q9UPT6 1336 aa18.66■□□□□ 0.58
ITGAM-202ENST00000544665 ROCK2O75116 1388 aaKnown RBP18.65■□□□□ 0.58
ITGAM-202ENST00000544665 FANCD2Q9BXW9 1451 aa18.65■□□□□ 0.58
ITGAM-202ENST00000544665 KTN1Q86UP2 1357 aaKnown RBP18.65■□□□□ 0.58
ITGAM-202ENST00000544665 NUDCQ9Y266 331 aa18.65■□□□□ 0.58
ITGAM-202ENST00000544665 HNRNPMP52272 730 aaKnown RBP eCLIP18.64■□□□□ 0.58
ITGAM-202ENST00000544665 U2SURPO15042 1029 aaKnown RBP18.64■□□□□ 0.57
ITGAM-202ENST00000544665 C14orf37Q86TY3 774 aa18.64■□□□□ 0.57
ITGAM-202ENST00000544665 KANK1Q14678 1352 aa18.62■□□□□ 0.57
ITGAM-202ENST00000544665 ZBTB7CA1YPR0 619 aa18.62■□□□□ 0.57
ITGAM-202ENST00000544665 KIF21BO75037 1637 aa18.62■□□□□ 0.57
ITGAM-202ENST00000544665 CCDC18Q5T9S5 1454 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms