RNA–Protein interactions for RNA: ENST00000544316.1

COPS7A-219, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-219ENST00000544316 KIF27Q86VH2 1401 aa18.24■□□□□ 0.51
COPS7A-219ENST00000544316 RUSC2Q8N2Y8 1516 aa18.21■□□□□ 0.51
COPS7A-219ENST00000544316 IGF1RP08069 1367 aa18.2■□□□□ 0.5
COPS7A-219ENST00000544316 KIAA0586Q9BVV6 1533 aa18.2■□□□□ 0.5
COPS7A-219ENST00000544316 CUL7Q14999 1698 aa18.2■□□□□ 0.5
COPS7A-219ENST00000544316 KIF13AQ9H1H9 1805 aa18.14■□□□□ 0.5
COPS7A-219ENST00000544316 MAPKBP1O60336 1514 aa18.13■□□□□ 0.49
COPS7A-219ENST00000544316 ABCC10Q5T3U5 1492 aa18.12■□□□□ 0.49
COPS7A-219ENST00000544316 FAM69CQ0P6D2 419 aa18.11■□□□□ 0.49
COPS7A-219ENST00000544316 CARMIL1Q5VZK9 1371 aa18.1■□□□□ 0.49
COPS7A-219ENST00000544316 CARMIL2Q6F5E8 1435 aa18.08■□□□□ 0.49
COPS7A-219ENST00000544316 ADCY10Q96PN6 1610 aa18.05■□□□□ 0.48
COPS7A-219ENST00000544316 PTPRGP23470 1445 aa18.05■□□□□ 0.48
COPS7A-219ENST00000544316 TNIKQ9UKE5 1360 aa18.02■□□□□ 0.47
COPS7A-219ENST00000544316 DIP2BQ9P265 1576 aa18.01■□□□□ 0.47
COPS7A-219ENST00000544316 IQGAP2Q13576 1575 aa17.98■□□□□ 0.47
COPS7A-219ENST00000544316 ABCC2Q92887 1545 aa17.95■□□□□ 0.46
COPS7A-219ENST00000544316 PLB1Q6P1J6 1458 aa17.94■□□□□ 0.46
COPS7A-219ENST00000544316 UHRF1BP1LA0JNW5 1464 aa17.93■□□□□ 0.46
COPS7A-219ENST00000544316 RAPGEF2Q9Y4G8 1499 aa17.93■□□□□ 0.46
COPS7A-219ENST00000544316 KDM6BO15054 1643 aa17.91■□□□□ 0.46
COPS7A-219ENST00000544316 UACAQ9BZF9 1416 aa17.9■□□□□ 0.46
COPS7A-219ENST00000544316 TTBK1Q5TCY1 1321 aaPredicted RBP17.89■□□□□ 0.45
COPS7A-219ENST00000544316 TSPOAP1O95153 1857 aa17.88■□□□□ 0.45
COPS7A-219ENST00000544316 CHIC1Q5VXU3 224 aa17.88■□□□□ 0.45
COPS7A-219ENST00000544316 UGGT2Q9NYU1 1516 aa17.88■□□□□ 0.45
COPS7A-219ENST00000544316 GLI2P10070 1586 aa17.87■□□□□ 0.45
COPS7A-219ENST00000544316 ASXL2Q76L83 1435 aa17.87■□□□□ 0.45
COPS7A-219ENST00000544316 DISP1Q96F81 1524 aa17.86■□□□□ 0.45
COPS7A-219ENST00000544316 FAM9AQ8IZU1 332 aaPredicted RBP17.83■□□□□ 0.44
COPS7A-219ENST00000544316 KDM5BQ9UGL1 1544 aa17.82■□□□□ 0.44
COPS7A-219ENST00000544316 GOLGA3Q08378 1498 aa17.8■□□□□ 0.44
COPS7A-219ENST00000544316 TEX14Q8IWB6 1497 aa17.78■□□□□ 0.44
COPS7A-219ENST00000544316 KIAA0556O60303 1618 aa17.78■□□□□ 0.44
COPS7A-219ENST00000544316 EPRSP07814 1512 aaKnown RBP17.76■□□□□ 0.43
COPS7A-219ENST00000544316 CTTNBP2Q8WZ74 1663 aa17.75■□□□□ 0.43
COPS7A-219ENST00000544316 KDM4FA0A1W2PPD8 638 aa17.74■□□□□ 0.43
COPS7A-219ENST00000544316 ZCCHC11Q5TAX3 1644 aaKnown RBP17.73■□□□□ 0.43
COPS7A-219ENST00000544316 MAP3K4Q9Y6R4 1608 aa17.72■□□□□ 0.43
COPS7A-219ENST00000544316 PPRC1Q5VV67 1664 aaKnown RBP17.72■□□□□ 0.43
COPS7A-219ENST00000544316 WDR7Q9Y4E6 1490 aa17.7■□□□□ 0.42
COPS7A-219ENST00000544316 PRXQ9BXM0 1461 aa17.69■□□□□ 0.42
COPS7A-219ENST00000544316 ABCA8O94911 1581 aa17.63■□□□□ 0.41
COPS7A-219ENST00000544316 CD109Q6YHK3 1445 aa17.63■□□□□ 0.41
COPS7A-219ENST00000544316 MAGI3Q5TCQ9 1506 aa17.62■□□□□ 0.41
COPS7A-219ENST00000544316 CFAP43Q8NDM7 1665 aa17.62■□□□□ 0.41
COPS7A-219ENST00000544316 KCNH8Q96L42 1107 aa17.6■□□□□ 0.41
COPS7A-219ENST00000544316 COL17A1Q9UMD9 1497 aaPredicted RBP17.6■□□□□ 0.41
COPS7A-219ENST00000544316 ADGRL1O94910 1474 aa17.58■□□□□ 0.41
COPS7A-219ENST00000544316 CSRNP3Q8WYN3 585 aa17.58■□□□□ 0.4
COPS7A-219ENST00000544316 PHLDB1Q86UU1 1377 aa17.56■□□□□ 0.4
COPS7A-219ENST00000544316 EEA1Q15075 1411 aa17.55■□□□□ 0.4
COPS7A-219ENST00000544316 ARAP3Q8WWN8 1544 aa17.5■□□□□ 0.39
COPS7A-219ENST00000544316 ATP10BO94823 1461 aa17.5■□□□□ 0.39
COPS7A-219ENST00000544316 P3H3Q8IVL6 736 aa17.49■□□□□ 0.39
COPS7A-219ENST00000544316 SAMD9Q5K651 1589 aa17.47■□□□□ 0.39
COPS7A-219ENST00000544316 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.45■□□□□ 0.38
COPS7A-219ENST00000544316 HNRNPUL2Q1KMD3 747 aaKnown RBP17.45■□□□□ 0.38
COPS7A-219ENST00000544316 ABCA9Q8IUA7 1624 aa17.44■□□□□ 0.38
COPS7A-219ENST00000544316 RAPGEF6Q8TEU7 1601 aa17.44■□□□□ 0.38
COPS7A-219ENST00000544316 NEO1Q92859 1461 aa17.42■□□□□ 0.38
COPS7A-219ENST00000544316 ARID3CA6NKF2 412 aa17.41■□□□□ 0.38
COPS7A-219ENST00000544316 PLEKHD1A6NEE1 506 aa17.4■□□□□ 0.38
COPS7A-219ENST00000544316 EFCAB5A4FU69 1503 aa17.36■□□□□ 0.37
COPS7A-219ENST00000544316 HECW2Q9P2P5 1572 aa17.36■□□□□ 0.37
COPS7A-219ENST00000544316 NUP153P49790 1475 aaKnown RBP17.35■□□□□ 0.37
COPS7A-219ENST00000544316 KIF21BO75037 1637 aa17.33■□□□□ 0.37
COPS7A-219ENST00000544316 RAPGEF3O95398 923 aa17.32■□□□□ 0.36
COPS7A-219ENST00000544316 FHOD3Q2V2M9 1422 aa17.31■□□□□ 0.36
COPS7A-219ENST00000544316 RANGAP1P46060 587 aaPredicted RBP17.31■□□□□ 0.36
COPS7A-219ENST00000544316 CFAP74Q9C0B2 1584 aa17.3■□□□□ 0.36
COPS7A-219ENST00000544316 ILDR1Q86SU0 546 aaPredicted RBP17.29■□□□□ 0.36
COPS7A-219ENST00000544316 DENND4BO75064 1496 aaPredicted RBP17.27■□□□□ 0.36
COPS7A-219ENST00000544316 ARID4BQ4LE39 1312 aaPredicted RBP17.26■□□□□ 0.35
COPS7A-219ENST00000544316 CDK11AQ9UQ88 783 aaPredicted RBP17.26■□□□□ 0.35
COPS7A-219ENST00000544316 AKNAQ7Z591 1439 aa17.26■□□□□ 0.35
COPS7A-219ENST00000544316 ADAMTSL3P82987 1691 aa17.26■□□□□ 0.35
COPS7A-219ENST00000544316 FANCAO15360 1455 aa17.25■□□□□ 0.35
COPS7A-219ENST00000544316 FMN1Q68DA7 1419 aa17.24■□□□□ 0.35
COPS7A-219ENST00000544316 UBTFP17480 764 aaKnown RBP17.24■□□□□ 0.35
COPS7A-219ENST00000544316 PTPRMP28827 1452 aa17.24■□□□□ 0.35
COPS7A-219ENST00000544316 POGZQ7Z3K3 1410 aa17.22■□□□□ 0.35
COPS7A-219ENST00000544316 MAGI2Q86UL8 1455 aa17.22■□□□□ 0.35
COPS7A-219ENST00000544316 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.21■□□□□ 0.35
COPS7A-219ENST00000544316 BCORL1Q5H9F3 1711 aa17.21■□□□□ 0.35
COPS7A-219ENST00000544316 FRMPD1Q5SYB0 1578 aa17.21■□□□□ 0.35
COPS7A-219ENST00000544316 RICTORQ6R327 1708 aa17.2■□□□□ 0.34
COPS7A-219ENST00000544316 ARHGEF40Q8TER5 1519 aa17.19■□□□□ 0.34
COPS7A-219ENST00000544316 PLCH2O75038 1416 aa17.18■□□□□ 0.34
COPS7A-219ENST00000544316 ZMYM4Q5VZL5 1548 aa17.17■□□□□ 0.34
COPS7A-219ENST00000544316 EFCAB2Q5VUJ9 269 aa17.16■□□□□ 0.34
COPS7A-219ENST00000544316 HECW1Q76N89 1606 aa17.16■□□□□ 0.34
COPS7A-219ENST00000544316 ATP1B4Q9UN42 357 aaPredicted RBP17.15■□□□□ 0.34
COPS7A-219ENST00000544316 TTC37Q6PGP7 1564 aa17.15■□□□□ 0.34
COPS7A-219ENST00000544316 MADDQ8WXG6 1647 aa17.14■□□□□ 0.33
COPS7A-219ENST00000544316 ZFYVE16Q7Z3T8 1539 aa17.13■□□□□ 0.33
COPS7A-219ENST00000544316 SCAPERQ9BY12 1400 aa17.13■□□□□ 0.33
COPS7A-219ENST00000544316 CDK13Q14004 1512 aaKnown RBP17.12■□□□□ 0.33
COPS7A-219ENST00000544316 CLIP1P30622 1438 aa17.11■□□□□ 0.33
COPS7A-219ENST00000544316 PCF11O94913 1555 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms