RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 TOP2BQ02880 1626 aa17.17■□□□□ 0.34
C2CD3-220ENST00000544293 ABCC10Q5T3U5 1492 aa17.14■□□□□ 0.33
C2CD3-220ENST00000544293 KDM4FA0A1W2PPD8 638 aa17.14■□□□□ 0.33
C2CD3-220ENST00000544293 BIVM-ERCC5R4GMW8 1640 aa17.12■□□□□ 0.33
C2CD3-220ENST00000544293 KIF13AQ9H1H9 1805 aa17.08■□□□□ 0.33
C2CD3-220ENST00000544293 SENP3Q9H4L4 574 aaPredicted RBP17.08■□□□□ 0.32
C2CD3-220ENST00000544293 IGF1RP08069 1367 aa17.07■□□□□ 0.32
C2CD3-220ENST00000544293 NPM1P06748 294 aaKnown RBP eCLIP17.07■□□□□ 0.32
C2CD3-220ENST00000544293 MAPKBP1O60336 1514 aa17.04■□□□□ 0.32
C2CD3-220ENST00000544293 RUSC2Q8N2Y8 1516 aa17.01■□□□□ 0.31
C2CD3-220ENST00000544293 KIAA0586Q9BVV6 1533 aa17.01■□□□□ 0.31
C2CD3-220ENST00000544293 ADCY10Q96PN6 1610 aa16.99■□□□□ 0.31
C2CD3-220ENST00000544293 DIP2BQ9P265 1576 aa16.99■□□□□ 0.31
C2CD3-220ENST00000544293 PTPRGP23470 1445 aa16.94■□□□□ 0.3
C2CD3-220ENST00000544293 ILDR1Q86SU0 546 aaPredicted RBP16.9■□□□□ 0.3
C2CD3-220ENST00000544293 TTBK1Q5TCY1 1321 aaPredicted RBP16.89■□□□□ 0.29
C2CD3-220ENST00000544293 KIF27Q86VH2 1401 aa16.88■□□□□ 0.29
C2CD3-220ENST00000544293 CARMIL1Q5VZK9 1371 aa16.88■□□□□ 0.29
C2CD3-220ENST00000544293 COL17A1Q9UMD9 1497 aaPredicted RBP16.87■□□□□ 0.29
C2CD3-220ENST00000544293 KDM6BO15054 1643 aa16.87■□□□□ 0.29
C2CD3-220ENST00000544293 TNIKQ9UKE5 1360 aa16.86■□□□□ 0.29
C2CD3-220ENST00000544293 ASXL2Q76L83 1435 aa16.84■□□□□ 0.29
C2CD3-220ENST00000544293 ABCC2Q92887 1545 aa16.84■□□□□ 0.29
C2CD3-220ENST00000544293 PLB1Q6P1J6 1458 aa16.8■□□□□ 0.28
C2CD3-220ENST00000544293 UHRF1BP1LA0JNW5 1464 aa16.79■□□□□ 0.28
C2CD3-220ENST00000544293 CARMIL2Q6F5E8 1435 aa16.78■□□□□ 0.28
C2CD3-220ENST00000544293 UACAQ9BZF9 1416 aa16.78■□□□□ 0.28
C2CD3-220ENST00000544293 GLI2P10070 1586 aa16.77■□□□□ 0.28
C2CD3-220ENST00000544293 DISP1Q96F81 1524 aa16.77■□□□□ 0.28
C2CD3-220ENST00000544293 TSPOAP1O95153 1857 aa16.76■□□□□ 0.27
C2CD3-220ENST00000544293 PPRC1Q5VV67 1664 aaKnown RBP16.75■□□□□ 0.27
C2CD3-220ENST00000544293 ADGRL1O94910 1474 aa16.74■□□□□ 0.27
C2CD3-220ENST00000544293 CUL7Q14999 1698 aa16.74■□□□□ 0.27
C2CD3-220ENST00000544293 EPRSP07814 1512 aaKnown RBP16.74■□□□□ 0.27
C2CD3-220ENST00000544293 KDM5BQ9UGL1 1544 aa16.73■□□□□ 0.27
C2CD3-220ENST00000544293 IQGAP2Q13576 1575 aa16.68■□□□□ 0.26
C2CD3-220ENST00000544293 UGGT2Q9NYU1 1516 aa16.65■□□□□ 0.26
C2CD3-220ENST00000544293 RAPGEF2Q9Y4G8 1499 aa16.61■□□□□ 0.25
C2CD3-220ENST00000544293 MAP3K4Q9Y6R4 1608 aa16.61■□□□□ 0.25
C2CD3-220ENST00000544293 TEX14Q8IWB6 1497 aa16.59■□□□□ 0.25
C2CD3-220ENST00000544293 KCNH8Q96L42 1107 aa16.58■□□□□ 0.24
C2CD3-220ENST00000544293 WDR7Q9Y4E6 1490 aa16.58■□□□□ 0.24
C2CD3-220ENST00000544293 HECW2Q9P2P5 1572 aa16.57■□□□□ 0.24
C2CD3-220ENST00000544293 ZCCHC11Q5TAX3 1644 aaKnown RBP16.56■□□□□ 0.24
C2CD3-220ENST00000544293 CD109Q6YHK3 1445 aa16.55■□□□□ 0.24
C2CD3-220ENST00000544293 KIAA0556O60303 1618 aa16.55■□□□□ 0.24
C2CD3-220ENST00000544293 MAGI3Q5TCQ9 1506 aa16.55■□□□□ 0.24
C2CD3-220ENST00000544293 ABCA8O94911 1581 aa16.48■□□□□ 0.23
C2CD3-220ENST00000544293 ARID3CA6NKF2 412 aa16.46■□□□□ 0.23
C2CD3-220ENST00000544293 ATP10BO94823 1461 aa16.43■□□□□ 0.22
C2CD3-220ENST00000544293 PRXQ9BXM0 1461 aa16.43■□□□□ 0.22
C2CD3-220ENST00000544293 ARAP3Q8WWN8 1544 aa16.43■□□□□ 0.22
C2CD3-220ENST00000544293 RAPGEF3O95398 923 aa16.42■□□□□ 0.22
C2CD3-220ENST00000544293 P3H3Q8IVL6 736 aa16.42■□□□□ 0.22
C2CD3-220ENST00000544293 GOLGA3Q08378 1498 aa16.42■□□□□ 0.22
C2CD3-220ENST00000544293 FBXO41Q8TF61 875 aa16.41■□□□□ 0.22
C2CD3-220ENST00000544293 CFAP43Q8NDM7 1665 aa16.37■□□□□ 0.21
C2CD3-220ENST00000544293 PTPRMP28827 1452 aa16.36■□□□□ 0.21
C2CD3-220ENST00000544293 PHLDB1Q86UU1 1377 aa16.34■□□□□ 0.21
C2CD3-220ENST00000544293 KIF21BO75037 1637 aa16.33■□□□□ 0.2
C2CD3-220ENST00000544293 ADAMTSL3P82987 1691 aa16.29■□□□□ 0.2
C2CD3-220ENST00000544293 NEO1Q92859 1461 aa16.27■□□□□ 0.19
C2CD3-220ENST00000544293 CSRNP3Q8WYN3 585 aa16.26■□□□□ 0.19
C2CD3-220ENST00000544293 ABCA9Q8IUA7 1624 aa16.26■□□□□ 0.19
C2CD3-220ENST00000544293 CTTNBP2Q8WZ74 1663 aa16.25■□□□□ 0.19
C2CD3-220ENST00000544293 LMTK3Q96Q04 1460 aa16.25■□□□□ 0.19
C2CD3-220ENST00000544293 NUP153P49790 1475 aaKnown RBP16.23■□□□□ 0.19
C2CD3-220ENST00000544293 ARID4BQ4LE39 1312 aaPredicted RBP16.23■□□□□ 0.19
C2CD3-220ENST00000544293 FRMPD1Q5SYB0 1578 aa16.23■□□□□ 0.19
C2CD3-220ENST00000544293 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.23■□□□□ 0.19
C2CD3-220ENST00000544293 HSPA2P54652 639 aa16.23■□□□□ 0.19
C2CD3-220ENST00000544293 HNRNPUL2Q1KMD3 747 aaKnown RBP16.23■□□□□ 0.19
C2CD3-220ENST00000544293 FAM9AQ8IZU1 332 aaPredicted RBP16.21■□□□□ 0.19
C2CD3-220ENST00000544293 PCF11O94913 1555 aaKnown RBP16.19■□□□□ 0.18
C2CD3-220ENST00000544293 FHOD3Q2V2M9 1422 aa16.19■□□□□ 0.18
C2CD3-220ENST00000544293 AKNAQ7Z591 1439 aa16.19■□□□□ 0.18
C2CD3-220ENST00000544293 SAMD9Q5K651 1589 aa16.18■□□□□ 0.18
C2CD3-220ENST00000544293 PLEKHD1A6NEE1 506 aa16.18■□□□□ 0.18
C2CD3-220ENST00000544293 RANGAP1P46060 587 aaPredicted RBP16.17■□□□□ 0.18
C2CD3-220ENST00000544293 BCORL1Q5H9F3 1711 aa16.16■□□□□ 0.18
C2CD3-220ENST00000544293 DENND4BO75064 1496 aaPredicted RBP16.16■□□□□ 0.18
C2CD3-220ENST00000544293 MADDQ8WXG6 1647 aa16.16■□□□□ 0.18
C2CD3-220ENST00000544293 YEATS2Q9ULM3 1422 aa16.16■□□□□ 0.18
C2CD3-220ENST00000544293 PLPPR3Q6T4P5 718 aa16.15■□□□□ 0.18
C2CD3-220ENST00000544293 RAPGEF6Q8TEU7 1601 aa16.14■□□□□ 0.17
C2CD3-220ENST00000544293 CERKQ8TCT0 537 aa16.12■□□□□ 0.17
C2CD3-220ENST00000544293 FANCAO15360 1455 aa16.11■□□□□ 0.17
C2CD3-220ENST00000544293 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.1■□□□□ 0.17
C2CD3-220ENST00000544293 MLECQ14165 292 aa16.1■□□□□ 0.17
C2CD3-220ENST00000544293 ARHGEF40Q8TER5 1519 aa16.09■□□□□ 0.17
C2CD3-220ENST00000544293 SIGLEC1Q9BZZ2 1709 aa16.08■□□□□ 0.17
C2CD3-220ENST00000544293 CEBPAP49715 358 aaPredicted RBP16.07■□□□□ 0.16
C2CD3-220ENST00000544293 PLCH2O75038 1416 aa16.06■□□□□ 0.16
C2CD3-220ENST00000544293 SCAPERQ9BY12 1400 aa16.05■□□□□ 0.16
C2CD3-220ENST00000544293 RICTORQ6R327 1708 aa16.05■□□□□ 0.16
C2CD3-220ENST00000544293 ZMYM4Q5VZL5 1548 aa16.04■□□□□ 0.16
C2CD3-220ENST00000544293 MAGI2Q86UL8 1455 aa16.04■□□□□ 0.16
C2CD3-220ENST00000544293 POGZQ7Z3K3 1410 aa16.04■□□□□ 0.16
C2CD3-220ENST00000544293 RIMS1Q86UR5 1692 aaKnown RBP16.04■□□□□ 0.16
C2CD3-220ENST00000544293 TTC37Q6PGP7 1564 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms