RNA–Protein interactions for RNA: ENST00000543938.5

AP3B2-210, Transcript of adaptor related protein complex 3 subunit beta 2, humanhuman

TSL 2

Gene AP3B2, Length 2,650 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B2-210ENST00000543938 A0A0U1RQG5 324 aaPredicted RBP17.74■□□□□ 0.43
AP3B2-210ENST00000543938 NBR1Q14596 966 aa17.74■□□□□ 0.43
AP3B2-210ENST00000543938 CADPSQ9ULU8 1353 aa17.73■□□□□ 0.43
AP3B2-210ENST00000543938 RBM10P98175 930 aaKnown RBP17.73■□□□□ 0.43
AP3B2-210ENST00000543938 BCL11BQ9C0K0 894 aaPredicted RBP17.71■□□□□ 0.43
AP3B2-210ENST00000543938 AEBP2Q6ZN18 517 aaPredicted RBP17.69■□□□□ 0.42
AP3B2-210ENST00000543938 TIMELESSQ9UNS1 1208 aa17.69■□□□□ 0.42
AP3B2-210ENST00000543938 CCDC88BA6NC98 1476 aa17.69■□□□□ 0.42
AP3B2-210ENST00000543938 RTL5Q5HYW3 569 aaPredicted RBP17.68■□□□□ 0.42
AP3B2-210ENST00000543938 NOP58Q9Y2X3 529 aaKnown RBP17.68■□□□□ 0.42
AP3B2-210ENST00000543938 ITGAEP38570 1179 aa17.65■□□□□ 0.42
AP3B2-210ENST00000543938 CFTRP13569 1480 aa17.65■□□□□ 0.42
AP3B2-210ENST00000543938 ERCC6Q03468 1493 aa17.65■□□□□ 0.42
AP3B2-210ENST00000543938 PDS5BQ9NTI5 1447 aa17.64■□□□□ 0.41
AP3B2-210ENST00000543938 CDK11AQ9UQ88 783 aaPredicted RBP17.64■□□□□ 0.41
AP3B2-210ENST00000543938 TAF7LQ5H9L4 462 aa17.62■□□□□ 0.41
AP3B2-210ENST00000543938 WASHC2AQ641Q2 1341 aa17.57■□□□□ 0.4
AP3B2-210ENST00000543938 WASHC2CQ9Y4E1 1318 aa17.57■□□□□ 0.4
AP3B2-210ENST00000543938 KIF21AQ7Z4S6 1674 aa17.56■□□□□ 0.4
AP3B2-210ENST00000543938 PRDM2Q13029 1718 aa17.54■□□□□ 0.4
AP3B2-210ENST00000543938 PAK3O75914 559 aaPredicted RBP17.52■□□□□ 0.39
AP3B2-210ENST00000543938 FANCD2Q9BXW9 1451 aa17.51■□□□□ 0.39
AP3B2-210ENST00000543938 THOC2Q8NI27 1593 aaKnown RBP17.5■□□□□ 0.39
AP3B2-210ENST00000543938 CUX2O14529 1486 aa17.49■□□□□ 0.39
AP3B2-210ENST00000543938 CEP164Q9UPV0 1460 aa17.48■□□□□ 0.39
AP3B2-210ENST00000543938 MRC2Q9UBG0 1479 aa17.45■□□□□ 0.38
AP3B2-210ENST00000543938 BRPF3Q9ULD4 1205 aa17.43■□□□□ 0.38
AP3B2-210ENST00000543938 WDR62O43379 1518 aa17.4■□□□□ 0.38
AP3B2-210ENST00000543938 USP35Q9P2H5 1018 aa17.4■□□□□ 0.38
AP3B2-210ENST00000543938 RRP9O43818 475 aaKnown RBP17.39■□□□□ 0.37
AP3B2-210ENST00000543938 FAM43AQ8N2R8 423 aa17.38■□□□□ 0.37
AP3B2-210ENST00000543938 HSP90AA2PQ14568 343 aaPredicted RBP17.35■□□□□ 0.37
AP3B2-210ENST00000543938 URB2Q14146 1524 aaKnown RBP17.33■□□□□ 0.36
AP3B2-210ENST00000543938 IPO9Q96P70 1041 aaKnown RBP17.3■□□□□ 0.36
AP3B2-210ENST00000543938 ABCC8Q09428 1581 aa17.29■□□□□ 0.36
AP3B2-210ENST00000543938 NEFMP07197 916 aa17.29■□□□□ 0.36
AP3B2-210ENST00000543938 ZBTB47Q9UFB7 747 aaPredicted RBP17.26■□□□□ 0.35
AP3B2-210ENST00000543938 RSPH4AQ5TD94 716 aa17.26■□□□□ 0.35
AP3B2-210ENST00000543938 KCNH8Q96L42 1107 aa17.25■□□□□ 0.35
AP3B2-210ENST00000543938 DNMBPQ6XZF7 1577 aa17.24■□□□□ 0.35
AP3B2-210ENST00000543938 TOPBP1Q92547 1522 aa17.24■□□□□ 0.35
AP3B2-210ENST00000543938 HOMEZQ8IX15 550 aa17.23■□□□□ 0.35
AP3B2-210ENST00000543938 PLPPR3Q6T4P5 718 aa17.22■□□□□ 0.35
AP3B2-210ENST00000543938 PRDM4Q9UKN5 801 aa17.21■□□□□ 0.35
AP3B2-210ENST00000543938 ANP32AP39687 249 aaKnown RBP17.2■□□□□ 0.34
AP3B2-210ENST00000543938 ZNF326Q5BKZ1 582 aaKnown RBP17.2■□□□□ 0.34
AP3B2-210ENST00000543938 NAP1L2Q9ULW6 460 aaPredicted RBP17.19■□□□□ 0.34
AP3B2-210ENST00000543938 BRD2P25440 801 aaKnown RBP17.19■□□□□ 0.34
AP3B2-210ENST00000543938 PAXIP1Q6ZW49 1069 aaPredicted RBP17.19■□□□□ 0.34
AP3B2-210ENST00000543938 GSE1Q14687 1217 aa17.18■□□□□ 0.34
AP3B2-210ENST00000543938 HSP90AA1P07900 732 aaKnown RBP17.16■□□□□ 0.34
AP3B2-210ENST00000543938 CALD1Q05682 793 aaKnown RBP17.16■□□□□ 0.34
AP3B2-210ENST00000543938 CHMP4AQ9BY43 222 aa17.15■□□□□ 0.34
AP3B2-210ENST00000543938 CUX1P39880 1505 aa17.14■□□□□ 0.33
AP3B2-210ENST00000543938 IFT140Q96RY7 1462 aa17.13■□□□□ 0.33
AP3B2-210ENST00000543938 DHX37Q8IY37 1157 aaKnown RBP17.13■□□□□ 0.33
AP3B2-210ENST00000543938 PPP4R2Q9NY27 417 aa17.12■□□□□ 0.33
AP3B2-210ENST00000543938 BBXQ8WY36 941 aaPredicted RBP17.1■□□□□ 0.33
AP3B2-210ENST00000543938 POLA1P09884 1462 aaPredicted RBP17.1■□□□□ 0.33
AP3B2-210ENST00000543938 NAP1L5Q96NT1 182 aaPredicted RBP17.1■□□□□ 0.33
AP3B2-210ENST00000543938 CENPJQ9HC77 1338 aaPredicted RBP17.09■□□□□ 0.33
AP3B2-210ENST00000543938 TULP1O00294 542 aaPredicted RBP17.09■□□□□ 0.33
AP3B2-210ENST00000543938 PPM1GO15355 546 aaPredicted RBP17.08■□□□□ 0.33
AP3B2-210ENST00000543938 IPO4Q8TEX9 1081 aaKnown RBP17.07■□□□□ 0.32
AP3B2-210ENST00000543938 TARBP1Q13395 1621 aaKnown RBP17.06■□□□□ 0.32
AP3B2-210ENST00000543938 FGD5Q6ZNL6 1462 aa17.06■□□□□ 0.32
AP3B2-210ENST00000543938 WRNQ14191 1432 aaPredicted RBP eCLIP17.06■□□□□ 0.32
AP3B2-210ENST00000543938 GTF2E1P29083 439 aaPredicted RBP17.05■□□□□ 0.32
AP3B2-210ENST00000543938 CHMP4BQ9H444 224 aaKnown RBP17.04■□□□□ 0.32
AP3B2-210ENST00000543938 BIVM-ERCC5R4GMW8 1640 aa17.04■□□□□ 0.32
AP3B2-210ENST00000543938 TOP2BQ02880 1626 aa17.03■□□□□ 0.32
AP3B2-210ENST00000543938 RGS3P49796 1198 aa17.03■□□□□ 0.32
AP3B2-210ENST00000543938 SOGA1O94964 1423 aa17.03■□□□□ 0.32
AP3B2-210ENST00000543938 SYNJ1O43426 1573 aa17■□□□□ 0.31
AP3B2-210ENST00000543938 ZNF608Q9ULD9 1512 aaPredicted RBP17■□□□□ 0.31
AP3B2-210ENST00000543938 RAD54L2Q9Y4B4 1467 aa17■□□□□ 0.31
AP3B2-210ENST00000543938 SAMD1Q6SPF0 538 aaPredicted RBP16.99■□□□□ 0.31
AP3B2-210ENST00000543938 WDR97A6NE52 1622 aa16.99■□□□□ 0.31
AP3B2-210ENST00000543938 FRAT1Q92837 279 aaPredicted RBP16.99■□□□□ 0.31
AP3B2-210ENST00000543938 TRIM52Q96A61 297 aa16.98■□□□□ 0.31
AP3B2-210ENST00000543938 STAC3Q96MF2 364 aa16.97■□□□□ 0.31
AP3B2-210ENST00000543938 RRAGDQ9NQL2 400 aaPredicted RBP16.97■□□□□ 0.31
AP3B2-210ENST00000543938 LAS1LQ9Y4W2 734 aaKnown RBP16.97■□□□□ 0.31
AP3B2-210ENST00000543938 CANXP27824 592 aaKnown RBP16.96■□□□□ 0.31
AP3B2-210ENST00000543938 EIF4G3O43432 1585 aaKnown RBP16.95■□□□□ 0.3
AP3B2-210ENST00000543938 PDCL3Q9H2J4 239 aa16.95■□□□□ 0.3
AP3B2-210ENST00000543938 IRX6P78412 446 aaPredicted RBP16.94■□□□□ 0.3
AP3B2-210ENST00000543938 NPM2Q86SE8 214 aaKnown RBP16.93■□□□□ 0.3
AP3B2-210ENST00000543938 DCAF11Q8TEB1 546 aa16.93■□□□□ 0.3
AP3B2-210ENST00000543938 ABCA10Q8WWZ4 1543 aa16.93■□□□□ 0.3
AP3B2-210ENST00000543938 CCER2I3L3R5 266 aa16.93■□□□□ 0.3
AP3B2-210ENST00000543938 AQRO60306 1485 aaKnown RBP eCLIP16.92■□□□□ 0.3
AP3B2-210ENST00000543938 TDRD9Q8NDG6 1382 aaKnown RBP16.89■□□□□ 0.29
AP3B2-210ENST00000543938 CNGB1Q14028 1251 aaPredicted RBP16.89■□□□□ 0.29
AP3B2-210ENST00000543938 PNNQ9H307 717 aaKnown RBP16.89■□□□□ 0.29
AP3B2-210ENST00000543938 B4GALNT3Q6L9W6 998 aa16.87■□□□□ 0.29
AP3B2-210ENST00000543938 EEA1Q15075 1411 aa16.86■□□□□ 0.29
AP3B2-210ENST00000543938 HAP1P54257 671 aaPredicted RBP16.85■□□□□ 0.29
AP3B2-210ENST00000543938 ABCA5Q8WWZ7 1642 aa16.85■□□□□ 0.29
AP3B2-210ENST00000543938 EHMT2Q96KQ7 1210 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms