RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 FHAD1B1AJZ9 1412 aa25.87■■□□□ 1.73
PTPRO-209ENST00000543886 KANK4Q5T7N3 995 aaPredicted RBP25.86■■□□□ 1.73
PTPRO-209ENST00000543886 MAP3K1Q13233 1512 aa25.83■■□□□ 1.72
PTPRO-209ENST00000543886 HNRNPUL2Q1KMD3 747 aaKnown RBP25.81■■□□□ 1.72
PTPRO-209ENST00000543886 TIAM1Q13009 1591 aa25.81■■□□□ 1.72
PTPRO-209ENST00000543886 ERCC6Q03468 1493 aa25.8■■□□□ 1.72
PTPRO-209ENST00000543886 IFT140Q96RY7 1462 aa25.8■■□□□ 1.72
PTPRO-209ENST00000543886 P3H3Q8IVL6 736 aa25.78■■□□□ 1.72
PTPRO-209ENST00000543886 PCF11O94913 1555 aaKnown RBP25.78■■□□□ 1.72
PTPRO-209ENST00000543886 FHOD3Q2V2M9 1422 aa25.78■■□□□ 1.72
PTPRO-209ENST00000543886 AQRO60306 1485 aaKnown RBP eCLIP25.77■■□□□ 1.72
PTPRO-209ENST00000543886 ADAMTS12P58397 1594 aa25.74■■□□□ 1.71
PTPRO-209ENST00000543886 GRIN2BQ13224 1484 aa25.74■■□□□ 1.71
PTPRO-209ENST00000543886 CFAP43Q8NDM7 1665 aa25.73■■□□□ 1.71
PTPRO-209ENST00000543886 FYCO1Q9BQS8 1478 aa25.71■■□□□ 1.71
PTPRO-209ENST00000543886 RRBP1Q9P2E9 1410 aaKnown RBP25.71■■□□□ 1.71
PTPRO-209ENST00000543886 SAMD9Q5K651 1589 aa25.71■■□□□ 1.71
PTPRO-209ENST00000543886 THOC2Q8NI27 1593 aaKnown RBP25.69■■□□□ 1.7
PTPRO-209ENST00000543886 FMN1Q68DA7 1419 aa25.68■■□□□ 1.7
PTPRO-209ENST00000543886 ZNF608Q9ULD9 1512 aaPredicted RBP25.68■■□□□ 1.7
PTPRO-209ENST00000543886 LRRC9Q6ZRR7 1453 aa25.68■■□□□ 1.7
PTPRO-209ENST00000543886 CASKIN1Q8WXD9 1431 aa25.67■■□□□ 1.7
PTPRO-209ENST00000543886 ATP1B4Q9UN42 357 aaPredicted RBP25.63■■□□□ 1.69
PTPRO-209ENST00000543886 CCNB3Q8WWL7 1395 aa25.61■■□□□ 1.69
PTPRO-209ENST00000543886 EIF4G3O43432 1585 aaKnown RBP25.61■■□□□ 1.69
PTPRO-209ENST00000543886 IQGAP2Q13576 1575 aa25.59■■□□□ 1.69
PTPRO-209ENST00000543886 SNAPC4Q5SXM2 1469 aa25.57■■□□□ 1.68
PTPRO-209ENST00000543886 PHLDB1Q86UU1 1377 aa25.47■■□□□ 1.67
PTPRO-209ENST00000543886 MAGI1Q96QZ7 1491 aaPredicted RBP25.45■■□□□ 1.67
PTPRO-209ENST00000543886 GRIN2AQ12879 1464 aa25.44■■□□□ 1.66
PTPRO-209ENST00000543886 LRRIQ1Q96JM4 1722 aa25.44■■□□□ 1.66
PTPRO-209ENST00000543886 UGGT2Q9NYU1 1516 aa25.43■■□□□ 1.66
PTPRO-209ENST00000543886 KIAA0586Q9BVV6 1533 aa25.41■■□□□ 1.66
PTPRO-209ENST00000543886 ITGAEP38570 1179 aa25.38■■□□□ 1.65
PTPRO-209ENST00000543886 MTUS2Q5JR59 1369 aa25.38■■□□□ 1.65
PTPRO-209ENST00000543886 HECW1Q76N89 1606 aa25.37■■□□□ 1.65
PTPRO-209ENST00000543886 SYNJ2O15056 1496 aa25.36■■□□□ 1.65
PTPRO-209ENST00000543886 CCDC18Q5T9S5 1454 aa25.36■■□□□ 1.65
PTPRO-209ENST00000543886 FAM50AQ14320 339 aaKnown RBP25.33■■□□□ 1.65
PTPRO-209ENST00000543886 EHBP1L1Q8N3D4 1523 aa25.33■■□□□ 1.64
PTPRO-209ENST00000543886 DHX57Q6P158 1386 aaKnown RBP25.32■■□□□ 1.64
PTPRO-209ENST00000543886 KIAA0556O60303 1618 aa25.32■■□□□ 1.64
PTPRO-209ENST00000543886 CHMP7Q8WUX9 453 aaPredicted RBP25.32■■□□□ 1.64
PTPRO-209ENST00000543886 CLSPNQ9HAW4 1339 aa25.31■■□□□ 1.64
PTPRO-209ENST00000543886 SUPT6HQ7KZ85 1726 aaKnown RBP25.3■■□□□ 1.64
PTPRO-209ENST00000543886 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.28■■□□□ 1.64
PTPRO-209ENST00000543886 CEP170Q5SW79 1584 aa25.27■■□□□ 1.64
PTPRO-209ENST00000543886 DISP1Q96F81 1524 aa25.27■■□□□ 1.64
PTPRO-209ENST00000543886 FGD6Q6ZV73 1430 aa25.26■■□□□ 1.63
PTPRO-209ENST00000543886 NCOA2Q15596 1464 aa25.25■■□□□ 1.63
PTPRO-209ENST00000543886 EPRSP07814 1512 aaKnown RBP25.24■■□□□ 1.63
PTPRO-209ENST00000543886 FBLN2P98095 1184 aa25.23■■□□□ 1.63
PTPRO-209ENST00000543886 RAB3GAP2Q9H2M9 1393 aa25.22■■□□□ 1.63
PTPRO-209ENST00000543886 SETD5Q9C0A6 1442 aa25.21■■□□□ 1.63
PTPRO-209ENST00000543886 MAGI3Q5TCQ9 1506 aa25.2■■□□□ 1.63
PTPRO-209ENST00000543886 NUP160Q12769 1436 aa25.19■■□□□ 1.62
PTPRO-209ENST00000543886 MYOM3Q5VTT5 1437 aa25.19■■□□□ 1.62
PTPRO-209ENST00000543886 CDK13Q14004 1512 aaKnown RBP25.17■■□□□ 1.62
PTPRO-209ENST00000543886 ARHGEF11O15085 1522 aa25.16■■□□□ 1.62
PTPRO-209ENST00000543886 RAPGEF6Q8TEU7 1601 aa25.15■■□□□ 1.62
PTPRO-209ENST00000543886 CARMIL2Q6F5E8 1435 aa25.1■■□□□ 1.61
PTPRO-209ENST00000543886 PTPN23Q9H3S7 1636 aa25.09■■□□□ 1.61
PTPRO-209ENST00000543886 NUP153P49790 1475 aaKnown RBP25.08■■□□□ 1.61
PTPRO-209ENST00000543886 ZNF316A6NFI3 1004 aaPredicted RBP25.08■■□□□ 1.6
PTPRO-209ENST00000543886 ARID3CA6NKF2 412 aa25.07■■□□□ 1.6
PTPRO-209ENST00000543886 JPH4Q96JJ6 628 aa25.06■■□□□ 1.6
PTPRO-209ENST00000543886 DIEXFQ68CQ4 756 aaKnown RBP25.01■■□□□ 1.59
PTPRO-209ENST00000543886 TCOF1Q13428 1488 aaKnown RBP25.01■■□□□ 1.59
PTPRO-209ENST00000543886 MAPKBP1O60336 1514 aa25.01■■□□□ 1.59
PTPRO-209ENST00000543886 CDK11AQ9UQ88 783 aaPredicted RBP24.98■■□□□ 1.59
PTPRO-209ENST00000543886 MIA2Q96PC5 1412 aa24.98■■□□□ 1.59
PTPRO-209ENST00000543886 PLB1Q6P1J6 1458 aa24.98■■□□□ 1.59
PTPRO-209ENST00000543886 PTPRKQ15262 1439 aa24.98■■□□□ 1.59
PTPRO-209ENST00000543886 HFM1A2PYH4 1435 aa24.97■■□□□ 1.59
PTPRO-209ENST00000543886 CHD1O14646 1710 aa24.97■■□□□ 1.59
PTPRO-209ENST00000543886 TROQ12816 1431 aaPredicted RBP24.89■■□□□ 1.57
PTPRO-209ENST00000543886 ABCA8O94911 1581 aa24.89■■□□□ 1.57
PTPRO-209ENST00000543886 NAIPQ13075 1403 aa24.88■■□□□ 1.57
PTPRO-209ENST00000543886 PRG4Q92954 1404 aaPredicted RBP24.87■■□□□ 1.57
PTPRO-209ENST00000543886 GCC2Q8IWJ2 1684 aa24.85■■□□□ 1.57
PTPRO-209ENST00000543886 ADCY10Q96PN6 1610 aa24.84■■□□□ 1.57
PTPRO-209ENST00000543886 AKNAQ7Z591 1439 aa24.82■■□□□ 1.56
PTPRO-209ENST00000543886 UACAQ9BZF9 1416 aa24.82■■□□□ 1.56
PTPRO-209ENST00000543886 ITSN2Q9NZM3 1697 aa24.82■■□□□ 1.56
PTPRO-209ENST00000543886 SHROOM2Q13796 1616 aa24.79■■□□□ 1.56
PTPRO-209ENST00000543886 CHIC2Q9UKJ5 165 aa24.78■■□□□ 1.56
PTPRO-209ENST00000543886 KIF14Q15058 1648 aa24.78■■□□□ 1.56
PTPRO-209ENST00000543886 PTPRGP23470 1445 aa24.77■■□□□ 1.56
PTPRO-209ENST00000543886 DNMT1P26358 1616 aaKnown RBP24.77■■□□□ 1.56
PTPRO-209ENST00000543886 RRP7BPQ9NSQ0 103 aa24.76■■□□□ 1.55
PTPRO-209ENST00000543886 DAPK1P53355 1430 aa24.75■■□□□ 1.55
PTPRO-209ENST00000543886 ATP10BO94823 1461 aa24.75■■□□□ 1.55
PTPRO-209ENST00000543886 NEUROD1Q13562 356 aa24.74■■□□□ 1.55
PTPRO-209ENST00000543886 SIN3AQ96ST3 1273 aa24.74■■□□□ 1.55
PTPRO-209ENST00000543886 PLEKHD1A6NEE1 506 aa24.72■■□□□ 1.55
PTPRO-209ENST00000543886 TIMELESSQ9UNS1 1208 aa24.71■■□□□ 1.55
PTPRO-209ENST00000543886 GPATCH8Q9UKJ3 1502 aaKnown RBP24.71■■□□□ 1.55
PTPRO-209ENST00000543886 CAMSAP2Q08AD1 1489 aa24.7■■□□□ 1.54
PTPRO-209ENST00000543886 ABCC5O15440 1437 aa24.7■■□□□ 1.54
PTPRO-209ENST00000543886 CFDP1Q9UEE9 299 aaPredicted RBP24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 149.6 ms