RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 FAM69CQ0P6D2 419 aa21.04■□□□□ 0.96
GABPB1-206ENST00000543881 RUSC2Q8N2Y8 1516 aa21.02■□□□□ 0.96
GABPB1-206ENST00000543881 ABCC10Q5T3U5 1492 aa21.02■□□□□ 0.96
GABPB1-206ENST00000543881 NPM1P06748 294 aaKnown RBP eCLIP21.01■□□□□ 0.95
GABPB1-206ENST00000543881 MAPKBP1O60336 1514 aa20.98■□□□□ 0.95
GABPB1-206ENST00000543881 DIP2BQ9P265 1576 aa20.95■□□□□ 0.94
GABPB1-206ENST00000543881 ADCY10Q96PN6 1610 aa20.95■□□□□ 0.94
GABPB1-206ENST00000543881 KIAA0586Q9BVV6 1533 aa20.88■□□□□ 0.93
GABPB1-206ENST00000543881 KDM6BO15054 1643 aa20.88■□□□□ 0.93
GABPB1-206ENST00000543881 TSPOAP1O95153 1857 aa20.85■□□□□ 0.93
GABPB1-206ENST00000543881 KDM4FA0A1W2PPD8 638 aa20.84■□□□□ 0.93
GABPB1-206ENST00000543881 IGF1RP08069 1367 aa20.82■□□□□ 0.92
GABPB1-206ENST00000543881 CUL7Q14999 1698 aa20.81■□□□□ 0.92
GABPB1-206ENST00000543881 KIF27Q86VH2 1401 aa20.78■□□□□ 0.92
GABPB1-206ENST00000543881 PTPRGP23470 1445 aa20.77■□□□□ 0.91
GABPB1-206ENST00000543881 TTBK1Q5TCY1 1321 aaPredicted RBP20.74■□□□□ 0.91
GABPB1-206ENST00000543881 ABCC2Q92887 1545 aa20.7■□□□□ 0.9
GABPB1-206ENST00000543881 CARMIL2Q6F5E8 1435 aa20.69■□□□□ 0.9
GABPB1-206ENST00000543881 TNIKQ9UKE5 1360 aa20.69■□□□□ 0.9
GABPB1-206ENST00000543881 CARMIL1Q5VZK9 1371 aa20.68■□□□□ 0.9
GABPB1-206ENST00000543881 ASXL2Q76L83 1435 aa20.67■□□□□ 0.9
GABPB1-206ENST00000543881 PLB1Q6P1J6 1458 aa20.65■□□□□ 0.9
GABPB1-206ENST00000543881 PPRC1Q5VV67 1664 aaKnown RBP20.65■□□□□ 0.9
GABPB1-206ENST00000543881 GLI2P10070 1586 aa20.64■□□□□ 0.9
GABPB1-206ENST00000543881 IQGAP2Q13576 1575 aa20.62■□□□□ 0.89
GABPB1-206ENST00000543881 UHRF1BP1LA0JNW5 1464 aa20.62■□□□□ 0.89
GABPB1-206ENST00000543881 UACAQ9BZF9 1416 aa20.59■□□□□ 0.89
GABPB1-206ENST00000543881 ADGRL1O94910 1474 aa20.58■□□□□ 0.88
GABPB1-206ENST00000543881 ILDR1Q86SU0 546 aaPredicted RBP20.57■□□□□ 0.88
GABPB1-206ENST00000543881 DISP1Q96F81 1524 aa20.56■□□□□ 0.88
GABPB1-206ENST00000543881 COL17A1Q9UMD9 1497 aaPredicted RBP20.54■□□□□ 0.88
GABPB1-206ENST00000543881 EPRSP07814 1512 aaKnown RBP20.54■□□□□ 0.88
GABPB1-206ENST00000543881 MAP3K4Q9Y6R4 1608 aa20.53■□□□□ 0.88
GABPB1-206ENST00000543881 KDM5BQ9UGL1 1544 aa20.52■□□□□ 0.88
GABPB1-206ENST00000543881 TEX14Q8IWB6 1497 aa20.5■□□□□ 0.87
GABPB1-206ENST00000543881 ZCCHC11Q5TAX3 1644 aaKnown RBP20.49■□□□□ 0.87
GABPB1-206ENST00000543881 UGGT2Q9NYU1 1516 aa20.48■□□□□ 0.87
GABPB1-206ENST00000543881 RAPGEF2Q9Y4G8 1499 aa20.45■□□□□ 0.86
GABPB1-206ENST00000543881 KIAA0556O60303 1618 aa20.44■□□□□ 0.86
GABPB1-206ENST00000543881 HECW2Q9P2P5 1572 aa20.41■□□□□ 0.86
GABPB1-206ENST00000543881 WDR7Q9Y4E6 1490 aa20.4■□□□□ 0.86
GABPB1-206ENST00000543881 CD109Q6YHK3 1445 aa20.33■□□□□ 0.84
GABPB1-206ENST00000543881 MAGI3Q5TCQ9 1506 aa20.32■□□□□ 0.84
GABPB1-206ENST00000543881 CFAP43Q8NDM7 1665 aa20.31■□□□□ 0.84
GABPB1-206ENST00000543881 CTTNBP2Q8WZ74 1663 aa20.31■□□□□ 0.84
GABPB1-206ENST00000543881 KCNH8Q96L42 1107 aa20.3■□□□□ 0.84
GABPB1-206ENST00000543881 ABCA8O94911 1581 aa20.28■□□□□ 0.84
GABPB1-206ENST00000543881 GOLGA3Q08378 1498 aa20.28■□□□□ 0.84
GABPB1-206ENST00000543881 KIF21BO75037 1637 aa20.22■□□□□ 0.83
GABPB1-206ENST00000543881 ARAP3Q8WWN8 1544 aa20.17■□□□□ 0.82
GABPB1-206ENST00000543881 PRXQ9BXM0 1461 aa20.17■□□□□ 0.82
GABPB1-206ENST00000543881 ARID3CA6NKF2 412 aa20.15■□□□□ 0.82
GABPB1-206ENST00000543881 FAM9AQ8IZU1 332 aaPredicted RBP20.12■□□□□ 0.81
GABPB1-206ENST00000543881 ATP10BO94823 1461 aa20.12■□□□□ 0.81
GABPB1-206ENST00000543881 P3H3Q8IVL6 736 aa20.1■□□□□ 0.81
GABPB1-206ENST00000543881 ABCA9Q8IUA7 1624 aa20.09■□□□□ 0.81
GABPB1-206ENST00000543881 PHLDB1Q86UU1 1377 aa20.09■□□□□ 0.81
GABPB1-206ENST00000543881 FBXO41Q8TF61 875 aa20.08■□□□□ 0.81
GABPB1-206ENST00000543881 ADAMTSL3P82987 1691 aa20.08■□□□□ 0.8
GABPB1-206ENST00000543881 PTPRMP28827 1452 aa20.07■□□□□ 0.8
GABPB1-206ENST00000543881 RAPGEF3O95398 923 aa20.06■□□□□ 0.8
GABPB1-206ENST00000543881 CSRNP3Q8WYN3 585 aa20.04■□□□□ 0.8
GABPB1-206ENST00000543881 NEO1Q92859 1461 aa20.02■□□□□ 0.8
GABPB1-206ENST00000543881 RAPGEF6Q8TEU7 1601 aa19.99■□□□□ 0.79
GABPB1-206ENST00000543881 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.99■□□□□ 0.79
GABPB1-206ENST00000543881 HNRNPUL2Q1KMD3 747 aaKnown RBP19.99■□□□□ 0.79
GABPB1-206ENST00000543881 BCORL1Q5H9F3 1711 aa19.99■□□□□ 0.79
GABPB1-206ENST00000543881 ARID4BQ4LE39 1312 aaPredicted RBP19.99■□□□□ 0.79
GABPB1-206ENST00000543881 SAMD9Q5K651 1589 aa19.99■□□□□ 0.79
GABPB1-206ENST00000543881 FRMPD1Q5SYB0 1578 aa19.98■□□□□ 0.79
GABPB1-206ENST00000543881 MADDQ8WXG6 1647 aa19.97■□□□□ 0.79
GABPB1-206ENST00000543881 PCF11O94913 1555 aaKnown RBP19.94■□□□□ 0.78
GABPB1-206ENST00000543881 EEA1Q15075 1411 aa19.93■□□□□ 0.78
GABPB1-206ENST00000543881 NUP153P49790 1475 aaKnown RBP19.92■□□□□ 0.78
GABPB1-206ENST00000543881 LMTK3Q96Q04 1460 aa19.92■□□□□ 0.78
GABPB1-206ENST00000543881 RIMS1Q86UR5 1692 aaKnown RBP19.89■□□□□ 0.77
GABPB1-206ENST00000543881 DENND4BO75064 1496 aaPredicted RBP19.89■□□□□ 0.77
GABPB1-206ENST00000543881 ARHGEF40Q8TER5 1519 aa19.89■□□□□ 0.77
GABPB1-206ENST00000543881 RICTORQ6R327 1708 aa19.88■□□□□ 0.77
GABPB1-206ENST00000543881 PLEKHD1A6NEE1 506 aa19.86■□□□□ 0.77
GABPB1-206ENST00000543881 RANGAP1P46060 587 aaPredicted RBP19.86■□□□□ 0.77
GABPB1-206ENST00000543881 AKNAQ7Z591 1439 aa19.85■□□□□ 0.77
GABPB1-206ENST00000543881 FHOD3Q2V2M9 1422 aa19.85■□□□□ 0.77
GABPB1-206ENST00000543881 FANCAO15360 1455 aa19.84■□□□□ 0.77
GABPB1-206ENST00000543881 CFAP74Q9C0B2 1584 aa19.83■□□□□ 0.77
GABPB1-206ENST00000543881 HSPA2P54652 639 aa19.82■□□□□ 0.76
GABPB1-206ENST00000543881 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.82■□□□□ 0.762e-9■■■■■ 40.7
GABPB1-206ENST00000543881 PLPPR3Q6T4P5 718 aa19.81■□□□□ 0.76
GABPB1-206ENST00000543881 POGZQ7Z3K3 1410 aa19.81■□□□□ 0.76
GABPB1-206ENST00000543881 CHIC1Q5VXU3 224 aa19.8■□□□□ 0.76
GABPB1-206ENST00000543881 ZMYM4Q5VZL5 1548 aa19.79■□□□□ 0.76
GABPB1-206ENST00000543881 TTC37Q6PGP7 1564 aa19.78■□□□□ 0.76
GABPB1-206ENST00000543881 SIGLEC1Q9BZZ2 1709 aa19.78■□□□□ 0.76
GABPB1-206ENST00000543881 ZFYVE16Q7Z3T8 1539 aa19.78■□□□□ 0.76
GABPB1-206ENST00000543881 YEATS2Q9ULM3 1422 aa19.78■□□□□ 0.76
GABPB1-206ENST00000543881 EFCAB5A4FU69 1503 aa19.77■□□□□ 0.76
GABPB1-206ENST00000543881 MAGI2Q86UL8 1455 aa19.75■□□□□ 0.75
GABPB1-206ENST00000543881 MLECQ14165 292 aa19.73■□□□□ 0.75
GABPB1-206ENST00000543881 HECW1Q76N89 1606 aa19.73■□□□□ 0.75
GABPB1-206ENST00000543881 FER1L4A9Z1Z3 1794 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms