RNA–Protein interactions for RNA: ENST00000543153.1

RFC5-209, Transcript of replication factor C subunit 5, humanhuman

TSL 5

Gene RFC5, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-209ENST00000543153 ZBTB47Q9UFB7 747 aaPredicted RBP19.43■□□□□ 0.7
RFC5-209ENST00000543153 SPOCK2Q92563 424 aa19.42■□□□□ 0.7
RFC5-209ENST00000543153 DNAJC5Q9H3Z4 198 aa19.42■□□□□ 0.7
RFC5-209ENST00000543153 BAZ1BQ9UIG0 1483 aaKnown RBP19.41■□□□□ 0.7
RFC5-209ENST00000543153 PRR29P0C7W0 189 aa19.4■□□□□ 0.7
RFC5-209ENST00000543153 NESP48681 1621 aa19.33■□□□□ 0.68
RFC5-209ENST00000543153 PITPNM1O00562 1244 aa19.3■□□□□ 0.68
RFC5-209ENST00000543153 PEG3Q9GZU2 1588 aa19.27■□□□□ 0.68
RFC5-209ENST00000543153 MROH2BQ7Z745 1585 aa19.26■□□□□ 0.67
RFC5-209ENST00000543153 LAMC3Q9Y6N6 1575 aa19.18■□□□□ 0.66
RFC5-209ENST00000543153 CREBZFQ9NS37 354 aa19.16■□□□□ 0.66
RFC5-209ENST00000543153 PKD2Q13563 968 aa19.13■□□□□ 0.65
RFC5-209ENST00000543153 THOC2Q8NI27 1593 aaKnown RBP19.12■□□□□ 0.65
RFC5-209ENST00000543153 PDS5BQ9NTI5 1447 aa19.11■□□□□ 0.65
RFC5-209ENST00000543153 KIF21AQ7Z4S6 1674 aa19.06■□□□□ 0.64
RFC5-209ENST00000543153 CIZ1Q9ULV3 898 aaPredicted RBP19.06■□□□□ 0.64
RFC5-209ENST00000543153 ECM2O94769 699 aaPredicted RBP19.03■□□□□ 0.64
RFC5-209ENST00000543153 WIZO95785 1651 aa19.03■□□□□ 0.64
RFC5-209ENST00000543153 CADPSQ9ULU8 1353 aa19.02■□□□□ 0.64
RFC5-209ENST00000543153 NPM1P06748 294 aaKnown RBP eCLIP18.99■□□□□ 0.63
RFC5-209ENST00000543153 MNX1P50219 401 aaPredicted RBP18.97■□□□□ 0.63
RFC5-209ENST00000543153 GSE1Q14687 1217 aa18.97■□□□□ 0.63
RFC5-209ENST00000543153 NUBP1P53384 320 aa18.95■□□□□ 0.62
RFC5-209ENST00000543153 MRC2Q9UBG0 1479 aa18.95■□□□□ 0.62
RFC5-209ENST00000543153 TRIM41Q8WV44 630 aa18.93■□□□□ 0.62
RFC5-209ENST00000543153 DCAF8Q5TAQ9 597 aa18.9■□□□□ 0.62
RFC5-209ENST00000543153 CHADLQ6NUI6 762 aa18.9■□□□□ 0.62
RFC5-209ENST00000543153 CHRDL2Q6WN34 429 aa18.9■□□□□ 0.62
RFC5-209ENST00000543153 FAM212AQ96EL1 285 aa18.89■□□□□ 0.61
RFC5-209ENST00000543153 CEP164Q9UPV0 1460 aa18.89■□□□□ 0.61
RFC5-209ENST00000543153 WDR62O43379 1518 aa18.86■□□□□ 0.61
RFC5-209ENST00000543153 PRKAR2AP13861 404 aaKnown RBP18.86■□□□□ 0.61
RFC5-209ENST00000543153 FXR2P51116 673 aaKnown RBP eCLIP18.85■□□□□ 0.61
RFC5-209ENST00000543153 RSF1Q96T23 1441 aaPredicted RBP18.84■□□□□ 0.61
RFC5-209ENST00000543153 FANCD2Q9BXW9 1451 aa18.84■□□□□ 0.61
RFC5-209ENST00000543153 TOP2AP11388 1531 aaKnown RBP18.81■□□□□ 0.6
RFC5-209ENST00000543153 FARP1Q9Y4F1 1045 aaPredicted RBP18.81■□□□□ 0.6
RFC5-209ENST00000543153 CFTRP13569 1480 aa18.77■□□□□ 0.6
RFC5-209ENST00000543153 RASEFQ8IZ41 740 aa18.77■□□□□ 0.6
RFC5-209ENST00000543153 RGL2O15211 777 aa18.75■□□□□ 0.59
RFC5-209ENST00000543153 PIP4P2Q8N4L2 257 aa18.73■□□□□ 0.59
RFC5-209ENST00000543153 SLC24A1O60721 1099 aa18.7■□□□□ 0.58
RFC5-209ENST00000543153 URB2Q14146 1524 aaKnown RBP18.64■□□□□ 0.58
RFC5-209ENST00000543153 CHRM1P11229 460 aaPredicted RBP18.62■□□□□ 0.57
RFC5-209ENST00000543153 TSPYL2Q9H2G4 693 aaPredicted RBP18.62■□□□□ 0.57
RFC5-209ENST00000543153 TAOK2Q9UL54 1235 aa18.61■□□□□ 0.57
RFC5-209ENST00000543153 CCDC88BA6NC98 1476 aa18.58■□□□□ 0.57
RFC5-209ENST00000543153 PAK3O75914 559 aaPredicted RBP18.57■□□□□ 0.56
RFC5-209ENST00000543153 PRDM2Q13029 1718 aa18.55■□□□□ 0.56
RFC5-209ENST00000543153 RIOK3O14730 519 aaKnown RBP18.54■□□□□ 0.56
RFC5-209ENST00000543153 PYGBP11216 843 aa18.54■□□□□ 0.56
RFC5-209ENST00000543153 BBXQ8WY36 941 aaPredicted RBP18.52■□□□□ 0.56
RFC5-209ENST00000543153 CHGAP10645 457 aaKnown RBP18.51■□□□□ 0.55
RFC5-209ENST00000543153 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.51■□□□□ 0.55
RFC5-209ENST00000543153 RNF25Q96BH1 459 aaPredicted RBP18.5■□□□□ 0.55
RFC5-209ENST00000543153 PLCB2Q00722 1185 aa18.48■□□□□ 0.55
RFC5-209ENST00000543153 IFT140Q96RY7 1462 aa18.47■□□□□ 0.55
RFC5-209ENST00000543153 TOPBP1Q92547 1522 aa18.45■□□□□ 0.54
RFC5-209ENST00000543153 ZNF608Q9ULD9 1512 aaPredicted RBP18.44■□□□□ 0.54
RFC5-209ENST00000543153 VGFO15240 615 aaPredicted RBP18.43■□□□□ 0.54
RFC5-209ENST00000543153 CCDC61Q9Y6R9 512 aa18.41■□□□□ 0.54
RFC5-209ENST00000543153 ABCC8Q09428 1581 aa18.41■□□□□ 0.54
RFC5-209ENST00000543153 HS6ST3Q8IZP7 471 aa18.39■□□□□ 0.53
RFC5-209ENST00000543153 DNMBPQ6XZF7 1577 aa18.38■□□□□ 0.53
RFC5-209ENST00000543153 ZNF467Q7Z7K2 595 aaPredicted RBP18.37■□□□□ 0.53
RFC5-209ENST00000543153 CD44P16070 742 aaKnown RBP18.36■□□□□ 0.53
RFC5-209ENST00000543153 EIF4G3O43432 1585 aaKnown RBP18.35■□□□□ 0.53
RFC5-209ENST00000543153 STK25O00506 426 aa18.32■□□□□ 0.52
RFC5-209ENST00000543153 ZRANB1Q9UGI0 708 aa18.32■□□□□ 0.52
RFC5-209ENST00000543153 SGIP1Q9BQI5 828 aa18.31■□□□□ 0.52
RFC5-209ENST00000543153 RIMBP3CA6NJZ7 1639 aa18.28■□□□□ 0.52
RFC5-209ENST00000543153 RIMBP3BA6NNM3 1639 aa18.28■□□□□ 0.52
RFC5-209ENST00000543153 RIMBP3Q9UFD9 1639 aa18.28■□□□□ 0.52
RFC5-209ENST00000543153 PAXIP1Q6ZW49 1069 aaPredicted RBP18.28■□□□□ 0.52
RFC5-209ENST00000543153 AQRO60306 1485 aaKnown RBP eCLIP18.27■□□□□ 0.522e-6■■■□□ 15.4
RFC5-209ENST00000543153 POLA1P09884 1462 aaPredicted RBP18.26■□□□□ 0.51
RFC5-209ENST00000543153 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.26■□□□□ 0.51
RFC5-209ENST00000543153 SPRYD3Q8NCJ5 442 aa18.26■□□□□ 0.51
RFC5-209ENST00000543153 ZFP91Q96JP5 570 aaPredicted RBP18.26■□□□□ 0.51
RFC5-209ENST00000543153 CFAP44Q96MT7 982 aa18.26■□□□□ 0.51
RFC5-209ENST00000543153 ARHGEF11O15085 1522 aa18.25■□□□□ 0.51
RFC5-209ENST00000543153 TARBP1Q13395 1621 aaKnown RBP18.25■□□□□ 0.51
RFC5-209ENST00000543153 ZNF579Q8NAF0 562 aaKnown RBP18.25■□□□□ 0.51
RFC5-209ENST00000543153 HAP1P54257 671 aaPredicted RBP18.24■□□□□ 0.51
RFC5-209ENST00000543153 PCDHB13Q9Y5F0 798 aa18.24■□□□□ 0.51
RFC5-209ENST00000543153 KIF12Q96FN5 646 aa18.22■□□□□ 0.51
RFC5-209ENST00000543153 PCDHB8Q9UN66 801 aa18.22■□□□□ 0.51
RFC5-209ENST00000543153 STK24Q9Y6E0 443 aa18.22■□□□□ 0.51
RFC5-209ENST00000543153 PDAP1Q13442 181 aaKnown RBP18.21■□□□□ 0.51
RFC5-209ENST00000543153 BCL11BQ9C0K0 894 aaPredicted RBP18.21■□□□□ 0.51
RFC5-209ENST00000543153 RAD54L2Q9Y4B4 1467 aa18.2■□□□□ 0.5
RFC5-209ENST00000543153 C19orf67A6NJJ6 358 aa18.2■□□□□ 0.5
RFC5-209ENST00000543153 SOGA1O94964 1423 aa18.2■□□□□ 0.5
RFC5-209ENST00000543153 CHD1O14646 1710 aa18.19■□□□□ 0.5
RFC5-209ENST00000543153 MAP3K13O43283 966 aa18.19■□□□□ 0.5
RFC5-209ENST00000543153 TDRD9Q8NDG6 1382 aaKnown RBP18.18■□□□□ 0.5
RFC5-209ENST00000543153 FGD5Q6ZNL6 1462 aa18.16■□□□□ 0.5
RFC5-209ENST00000543153 CYB5RLQ6IPT4 315 aa18.15■□□□□ 0.5
RFC5-209ENST00000543153 IFNL1Q8IU54 200 aa18.13■□□□□ 0.49
RFC5-209ENST00000543153 PHF12Q96QT6 1004 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms