RNA–Protein interactions for RNA: ENST00000543120.5

PTPN6-221, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 564 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-221ENST00000543120 TRHP20396 242 aaPredicted RBP28.44■■■□□ 2.14
PTPN6-221ENST00000543120 RUSC2Q8N2Y8 1516 aa28.42■■■□□ 2.14
PTPN6-221ENST00000543120 CUL7Q14999 1698 aa28.38■■■□□ 2.13
PTPN6-221ENST00000543120 KIAA0586Q9BVV6 1533 aa28.36■■■□□ 2.13
PTPN6-221ENST00000543120 RAPGEF2Q9Y4G8 1499 aa28.21■■■□□ 2.11
PTPN6-221ENST00000543120 TTBK1Q5TCY1 1321 aaPredicted RBP28.09■■■□□ 2.09
PTPN6-221ENST00000543120 PTPRGP23470 1445 aa28.07■■■□□ 2.08
PTPN6-221ENST00000543120 PRXQ9BXM0 1461 aa28.06■■■□□ 2.08
PTPN6-221ENST00000543120 IQGAP2Q13576 1575 aa28.06■■■□□ 2.08
PTPN6-221ENST00000543120 CARMIL2Q6F5E8 1435 aa28.03■■■□□ 2.08
PTPN6-221ENST00000543120 TNIKQ9UKE5 1360 aa28.03■■■□□ 2.08
PTPN6-221ENST00000543120 NPM1P06748 294 aaKnown RBP eCLIP28.02■■■□□ 2.08
PTPN6-221ENST00000543120 CSRNP3Q8WYN3 585 aa28.01■■■□□ 2.07
PTPN6-221ENST00000543120 DISP1Q96F81 1524 aa28.01■■■□□ 2.07
PTPN6-221ENST00000543120 ADCY10Q96PN6 1610 aa27.98■■■□□ 2.07
PTPN6-221ENST00000543120 UGGT2Q9NYU1 1516 aa27.95■■■□□ 2.06
PTPN6-221ENST00000543120 CHIC1Q5VXU3 224 aa27.91■■■□□ 2.06
PTPN6-221ENST00000543120 FAM9AQ8IZU1 332 aaPredicted RBP27.9■■■□□ 2.06
PTPN6-221ENST00000543120 FAM69CQ0P6D2 419 aa27.89■■■□□ 2.06
PTPN6-221ENST00000543120 UACAQ9BZF9 1416 aa27.84■■■□□ 2.05
PTPN6-221ENST00000543120 MAPKBP1O60336 1514 aa27.84■■■□□ 2.05
PTPN6-221ENST00000543120 ABCC10Q5T3U5 1492 aa27.83■■■□□ 2.05
PTPN6-221ENST00000543120 KIAA0556O60303 1618 aa27.81■■■□□ 2.04
PTPN6-221ENST00000543120 EEA1Q15075 1411 aa27.81■■■□□ 2.04
PTPN6-221ENST00000543120 ABCC2Q92887 1545 aa27.79■■■□□ 2.04
PTPN6-221ENST00000543120 UHRF1BP1LA0JNW5 1464 aa27.79■■■□□ 2.04
PTPN6-221ENST00000543120 CTTNBP2Q8WZ74 1663 aa27.76■■■□□ 2.03
PTPN6-221ENST00000543120 KIF13AQ9H1H9 1805 aa27.75■■■□□ 2.03
PTPN6-221ENST00000543120 P3H3Q8IVL6 736 aa27.74■■■□□ 2.03
PTPN6-221ENST00000543120 GOLGA3Q08378 1498 aa27.74■■■□□ 2.03
PTPN6-221ENST00000543120 DIP2BQ9P265 1576 aa27.7■■■□□ 2.03
PTPN6-221ENST00000543120 ASXL2Q76L83 1435 aa27.7■■■□□ 2.03
PTPN6-221ENST00000543120 PLB1Q6P1J6 1458 aa27.7■■■□□ 2.02
PTPN6-221ENST00000543120 KDM5BQ9UGL1 1544 aa27.67■■■□□ 2.02
PTPN6-221ENST00000543120 RANGAP1P46060 587 aaPredicted RBP27.65■■■□□ 2.02
PTPN6-221ENST00000543120 EHMT2Q96KQ7 1210 aa27.62■■■□□ 2.01
PTPN6-221ENST00000543120 ABCA8O94911 1581 aa27.58■■■□□ 2.01
PTPN6-221ENST00000543120 ZCCHC11Q5TAX3 1644 aaKnown RBP27.54■■■□□ 2
PTPN6-221ENST00000543120 ARID3CA6NKF2 412 aa27.53■■■□□ 2
PTPN6-221ENST00000543120 KIF21BO75037 1637 aa27.52■■■□□ 2
PTPN6-221ENST00000543120 EPRSP07814 1512 aaKnown RBP27.52■■■□□ 2
PTPN6-221ENST00000543120 SAMD9Q5K651 1589 aa27.51■■□□□ 1.99
PTPN6-221ENST00000543120 GLI2P10070 1586 aa27.49■■□□□ 1.99
PTPN6-221ENST00000543120 UBTFP17480 764 aaKnown RBP27.48■■□□□ 1.99
PTPN6-221ENST00000543120 KCNH8Q96L42 1107 aa27.47■■□□□ 1.99
PTPN6-221ENST00000543120 WDR7Q9Y4E6 1490 aa27.45■■□□□ 1.99
PTPN6-221ENST00000543120 FHOD3Q2V2M9 1422 aa27.45■■□□□ 1.98
PTPN6-221ENST00000543120 TSPOAP1O95153 1857 aa27.44■■□□□ 1.98
PTPN6-221ENST00000543120 ATP10BO94823 1461 aa27.44■■□□□ 1.98
PTPN6-221ENST00000543120 PPRC1Q5VV67 1664 aaKnown RBP27.36■■□□□ 1.97
PTPN6-221ENST00000543120 KDM6BO15054 1643 aa27.33■■□□□ 1.97
PTPN6-221ENST00000543120 MAP3K4Q9Y6R4 1608 aa27.32■■□□□ 1.96
PTPN6-221ENST00000543120 COL17A1Q9UMD9 1497 aaPredicted RBP27.32■■□□□ 1.96
PTPN6-221ENST00000543120 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.31■■□□□ 1.96
PTPN6-221ENST00000543120 HNRNPUL2Q1KMD3 747 aaKnown RBP27.31■■□□□ 1.96
PTPN6-221ENST00000543120 NUP153P49790 1475 aaKnown RBP27.31■■□□□ 1.96
PTPN6-221ENST00000543120 RAPGEF6Q8TEU7 1601 aa27.3■■□□□ 1.96
PTPN6-221ENST00000543120 CD109Q6YHK3 1445 aa27.3■■□□□ 1.96
PTPN6-221ENST00000543120 EFCAB5A4FU69 1503 aa27.29■■□□□ 1.96
PTPN6-221ENST00000543120 TEX14Q8IWB6 1497 aa27.24■■□□□ 1.95
PTPN6-221ENST00000543120 ARHGAP35Q9NRY4 1499 aa27.23■■□□□ 1.95
PTPN6-221ENST00000543120 AEBP2Q6ZN18 517 aaPredicted RBP27.22■■□□□ 1.95
PTPN6-221ENST00000543120 MAGI3Q5TCQ9 1506 aa27.21■■□□□ 1.95
PTPN6-221ENST00000543120 PLEKHD1A6NEE1 506 aa27.17■■□□□ 1.94
PTPN6-221ENST00000543120 ATP1B4Q9UN42 357 aaPredicted RBP27.14■■□□□ 1.94
PTPN6-221ENST00000543120 CFAP43Q8NDM7 1665 aa27.13■■□□□ 1.93
PTPN6-221ENST00000543120 FMN1Q68DA7 1419 aa27.11■■□□□ 1.93
PTPN6-221ENST00000543120 KDM4FA0A1W2PPD8 638 aa27.11■■□□□ 1.93
PTPN6-221ENST00000543120 CDK13Q14004 1512 aaKnown RBP27.07■■□□□ 1.92
PTPN6-221ENST00000543120 ABCA9Q8IUA7 1624 aa27.07■■□□□ 1.92
PTPN6-221ENST00000543120 RAPGEF3O95398 923 aa26.98■■□□□ 1.91
PTPN6-221ENST00000543120 ARAP3Q8WWN8 1544 aa26.98■■□□□ 1.91
PTPN6-221ENST00000543120 PHLDB1Q86UU1 1377 aa26.97■■□□□ 1.91
PTPN6-221ENST00000543120 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.95■■□□□ 1.91
PTPN6-221ENST00000543120 CLIP1P30622 1438 aa26.94■■□□□ 1.9
PTPN6-221ENST00000543120 HECW1Q76N89 1606 aa26.94■■□□□ 1.9
PTPN6-221ENST00000543120 NEO1Q92859 1461 aa26.93■■□□□ 1.9
PTPN6-221ENST00000543120 CDK11AQ9UQ88 783 aaPredicted RBP26.92■■□□□ 1.9
PTPN6-221ENST00000543120 CASKIN1Q8WXD9 1431 aa26.9■■□□□ 1.9
PTPN6-221ENST00000543120 TTC37Q6PGP7 1564 aa26.88■■□□□ 1.89
PTPN6-221ENST00000543120 LOC105371045A0A1W2PR82 267 aa26.86■■□□□ 1.89
PTPN6-221ENST00000543120 AKNAQ7Z591 1439 aa26.86■■□□□ 1.89
PTPN6-221ENST00000543120 ADGRL1O94910 1474 aa26.85■■□□□ 1.89
PTPN6-221ENST00000543120 FANCAO15360 1455 aa26.84■■□□□ 1.89
PTPN6-221ENST00000543120 PLCH2O75038 1416 aa26.83■■□□□ 1.89
PTPN6-221ENST00000543120 TROQ12816 1431 aaPredicted RBP26.83■■□□□ 1.89
PTPN6-221ENST00000543120 PCF11O94913 1555 aaKnown RBP26.82■■□□□ 1.88
PTPN6-221ENST00000543120 LRRIQ1Q96JM4 1722 aa26.8■■□□□ 1.88
PTPN6-221ENST00000543120 DENND4BO75064 1496 aaPredicted RBP26.77■■□□□ 1.88
PTPN6-221ENST00000543120 KIF14Q15058 1648 aa26.76■■□□□ 1.87
PTPN6-221ENST00000543120 FRMPD1Q5SYB0 1578 aa26.76■■□□□ 1.87
PTPN6-221ENST00000543120 EFCAB2Q5VUJ9 269 aa26.75■■□□□ 1.87
PTPN6-221ENST00000543120 CCDC18Q5T9S5 1454 aa26.74■■□□□ 1.87
PTPN6-221ENST00000543120 FYCO1Q9BQS8 1478 aa26.74■■□□□ 1.87
PTPN6-221ENST00000543120 CEP162Q5TB80 1403 aa26.73■■□□□ 1.87
PTPN6-221ENST00000543120 SCAPERQ9BY12 1400 aa26.72■■□□□ 1.87
PTPN6-221ENST00000543120 CFAP74Q9C0B2 1584 aa26.66■■□□□ 1.86
PTPN6-221ENST00000543120 RICTORQ6R327 1708 aa26.63■■□□□ 1.85
PTPN6-221ENST00000543120 AFAP1Q8N556 730 aa26.62■■□□□ 1.85
PTPN6-221ENST00000543120 POGZQ7Z3K3 1410 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms