RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 ANP32EQ9BTT0 268 aa17.34■□□□□ 0.37
TNC-212ENST00000542877 MYH16Q9H6N6 1097 aa17.34■□□□□ 0.37
TNC-212ENST00000542877 GOLGA3Q08378 1498 aa17.33■□□□□ 0.37
TNC-212ENST00000542877 NPM1P06748 294 aaKnown RBP eCLIP17.33■□□□□ 0.36
TNC-212ENST00000542877 CEP162Q5TB80 1403 aa17.32■□□□□ 0.36
TNC-212ENST00000542877 CCDC180Q9P1Z9 1646 aa17.31■□□□□ 0.36
TNC-212ENST00000542877 MYO15BQ96JP2 1530 aa17.31■□□□□ 0.36
TNC-212ENST00000542877 RSF1Q96T23 1441 aaPredicted RBP17.29■□□□□ 0.36
TNC-212ENST00000542877 RRP7BPQ9NSQ0 103 aa17.27■□□□□ 0.36
TNC-212ENST00000542877 TRIM44Q96DX7 344 aaPredicted RBP17.24■□□□□ 0.35
TNC-212ENST00000542877 GOLGA6L22H0YM25 854 aa17.23■□□□□ 0.35
TNC-212ENST00000542877 PPM1GO15355 546 aaPredicted RBP17.23■□□□□ 0.35
TNC-212ENST00000542877 SUPT16HQ9Y5B9 1047 aaKnown RBP17.22■□□□□ 0.35
TNC-212ENST00000542877 NCLP19338 710 aaKnown RBP17.21■□□□□ 0.35
TNC-212ENST00000542877 TNIKQ9UKE5 1360 aa17.2■□□□□ 0.34
TNC-212ENST00000542877 PPP4R2Q9NY27 417 aa17.19■□□□□ 0.34
TNC-212ENST00000542877 CDCA8Q53HL2 280 aa17.18■□□□□ 0.34
TNC-212ENST00000542877 CFAP53Q96M91 514 aa17.16■□□□□ 0.34
TNC-212ENST00000542877 CHMP7Q8WUX9 453 aaPredicted RBP17.15■□□□□ 0.34
TNC-212ENST00000542877 KNSTRNQ9Y448 316 aa17.14■□□□□ 0.33
TNC-212ENST00000542877 CEP164Q9UPV0 1460 aa17.13■□□□□ 0.33
TNC-212ENST00000542877 WRNQ14191 1432 aaPredicted RBP eCLIP17.12■□□□□ 0.33
TNC-212ENST00000542877 ERICH6BQ5W0A0 696 aa17.12■□□□□ 0.33
TNC-212ENST00000542877 PLEKHD1A6NEE1 506 aa17.11■□□□□ 0.33
TNC-212ENST00000542877 CARD11Q9BXL7 1154 aa17.1■□□□□ 0.33
TNC-212ENST00000542877 RGL3Q3MIN7 710 aa17.09■□□□□ 0.33
TNC-212ENST00000542877 PLPPR3Q6T4P5 718 aa17.09■□□□□ 0.33
TNC-212ENST00000542877 NOP58Q9Y2X3 529 aaKnown RBP17.09■□□□□ 0.33
TNC-212ENST00000542877 CASC1Q6TDU7 716 aa17.07■□□□□ 0.32
TNC-212ENST00000542877 FTSJ3Q8IY81 847 aaKnown RBP17.07■□□□□ 0.32
TNC-212ENST00000542877 KIF27Q86VH2 1401 aa17.06■□□□□ 0.32
TNC-212ENST00000542877 PTMAP06454 111 aaKnown RBP17.04■□□□□ 0.32
TNC-212ENST00000542877 CFDP1Q9UEE9 299 aaPredicted RBP17.04■□□□□ 0.32
TNC-212ENST00000542877 CDK11BP21127 795 aaKnown RBP17.03■□□□□ 0.32
TNC-212ENST00000542877 SIN3AQ96ST3 1273 aa17.03■□□□□ 0.32
TNC-212ENST00000542877 TIMELESSQ9UNS1 1208 aa17.03■□□□□ 0.32
TNC-212ENST00000542877 TNNT2P45379 298 aaPredicted RBP17.02■□□□□ 0.32
TNC-212ENST00000542877 LAS1LQ9Y4W2 734 aaKnown RBP17.01■□□□□ 0.31
TNC-212ENST00000542877 PPP1R15AO75807 674 aaPredicted RBP17.01■□□□□ 0.31
TNC-212ENST00000542877 SENP3-EIF4A1A0A087X0R7 540 aa17.01■□□□□ 0.31
TNC-212ENST00000542877 CHMP4BQ9H444 224 aaKnown RBP16.99■□□□□ 0.31
TNC-212ENST00000542877 CCER2I3L3R5 266 aa16.99■□□□□ 0.31
TNC-212ENST00000542877 RGS3P49796 1198 aa16.98■□□□□ 0.31
TNC-212ENST00000542877 ZRSR1Q15695 479 aaKnown RBP16.98■□□□□ 0.31
TNC-212ENST00000542877 MS4A1P11836 297 aa16.98■□□□□ 0.31
TNC-212ENST00000542877 NUDCQ9Y266 331 aa16.98■□□□□ 0.31
TNC-212ENST00000542877 MAPK8IP3Q9UPT6 1336 aa16.98■□□□□ 0.31
TNC-212ENST00000542877 KCNH8Q96L42 1107 aa16.98■□□□□ 0.31
TNC-212ENST00000542877 RB1CC1Q8TDY2 1594 aa16.98■□□□□ 0.31
TNC-212ENST00000542877 DNTTIP2Q5QJE6 756 aaKnown RBP16.97■□□□□ 0.31
TNC-212ENST00000542877 CCNB3Q8WWL7 1395 aa16.96■□□□□ 0.31
TNC-212ENST00000542877 B4GALNT3Q6L9W6 998 aa16.95■□□□□ 0.3
TNC-212ENST00000542877 NEUROD2Q15784 382 aa16.95■□□□□ 0.3
TNC-212ENST00000542877 NAP1L5Q96NT1 182 aaPredicted RBP16.94■□□□□ 0.3
TNC-212ENST00000542877 C14orf37Q86TY3 774 aa16.93■□□□□ 0.3
TNC-212ENST00000542877 FRAT1Q92837 279 aaPredicted RBP16.93■□□□□ 0.3
TNC-212ENST00000542877 BAZ1BQ9UIG0 1483 aaKnown RBP16.92■□□□□ 0.3
TNC-212ENST00000542877 ZBTB7CA1YPR0 619 aa16.92■□□□□ 0.3
TNC-212ENST00000542877 FHAD1B1AJZ9 1412 aa16.91■□□□□ 0.3
TNC-212ENST00000542877 HSP90AB1P08238 724 aaKnown RBP16.9■□□□□ 0.3
TNC-212ENST00000542877 CC2D1BQ5T0F9 858 aaKnown RBP16.88■□□□□ 0.29
TNC-212ENST00000542877 RTN4Q9NQC3 1192 aaKnown RBP16.88■□□□□ 0.29
TNC-212ENST00000542877 SENP3Q9H4L4 574 aaPredicted RBP16.87■□□□□ 0.29
TNC-212ENST00000542877 TMF1P82094 1093 aa16.87■□□□□ 0.29
TNC-212ENST00000542877 PNNQ9H307 717 aaKnown RBP16.87■□□□□ 0.29
TNC-212ENST00000542877 RBM19Q9Y4C8 960 aaKnown RBP16.87■□□□□ 0.29
TNC-212ENST00000542877 L1TD1Q5T7N2 865 aaKnown RBP16.85■□□□□ 0.29
TNC-212ENST00000542877 HSCBQ8IWL3 235 aa16.84■□□□□ 0.29
TNC-212ENST00000542877 SETD5Q9C0A6 1442 aa16.83■□□□□ 0.29
TNC-212ENST00000542877 DEKP35659 375 aaKnown RBP16.83■□□□□ 0.28
TNC-212ENST00000542877 NACADO15069 1562 aa16.83■□□□□ 0.28
TNC-212ENST00000542877 A0A0G2JS52 829 aa16.83■□□□□ 0.28
TNC-212ENST00000542877 POGKQ9P215 609 aa16.82■□□□□ 0.28
TNC-212ENST00000542877 TPRNQ4KMQ1 711 aa16.81■□□□□ 0.28
TNC-212ENST00000542877 GOLGA6L6A8MZA4 724 aa16.81■□□□□ 0.28
TNC-212ENST00000542877 DCAF11Q8TEB1 546 aa16.8■□□□□ 0.28
TNC-212ENST00000542877 PLCB2Q00722 1185 aa16.8■□□□□ 0.28
TNC-212ENST00000542877 U2SURPO15042 1029 aaKnown RBP16.79■□□□□ 0.28
TNC-212ENST00000542877 HSPA5P11021 654 aaKnown RBP16.79■□□□□ 0.28
TNC-212ENST00000542877 CFAP44Q96MT7 982 aa16.79■□□□□ 0.28
TNC-212ENST00000542877 PLEKHG5O94827 1062 aa16.79■□□□□ 0.28
TNC-212ENST00000542877 BAZ1AQ9NRL2 1556 aaPredicted RBP16.79■□□□□ 0.28
TNC-212ENST00000542877 VPS8Q8N3P4 1428 aa16.78■□□□□ 0.28
TNC-212ENST00000542877 NRDCO43847 1150 aa16.77■□□□□ 0.28
TNC-212ENST00000542877 OS9Q13438 667 aaPredicted RBP16.75■□□□□ 0.27
TNC-212ENST00000542877 CARMIL1Q5VZK9 1371 aa16.74■□□□□ 0.27
TNC-212ENST00000542877 SOGA1O94964 1423 aa16.74■□□□□ 0.27
TNC-212ENST00000542877 KTN1Q86UP2 1357 aaKnown RBP16.74■□□□□ 0.27
TNC-212ENST00000542877 MSNP26038 577 aaKnown RBP16.74■□□□□ 0.27
TNC-212ENST00000542877 FGD1P98174 961 aa16.74■□□□□ 0.27
TNC-212ENST00000542877 KCNJ4P48050 445 aa16.73■□□□□ 0.27
TNC-212ENST00000542877 CHAF1AQ13111 956 aaPredicted RBP16.73■□□□□ 0.27
TNC-212ENST00000542877 ARHGAP35Q9NRY4 1499 aa16.73■□□□□ 0.27
TNC-212ENST00000542877 MCCP23508 829 aa16.73■□□□□ 0.27
TNC-212ENST00000542877 TCERG1O14776 1098 aaKnown RBP16.72■□□□□ 0.27
TNC-212ENST00000542877 GOLGA6L4A6NEF3 574 aa16.72■□□□□ 0.27
TNC-212ENST00000542877 HAP1P54257 671 aaPredicted RBP16.72■□□□□ 0.27
TNC-212ENST00000542877 MORC1Q86VD1 984 aa16.71■□□□□ 0.27
TNC-212ENST00000542877 KANK1Q14678 1352 aa16.71■□□□□ 0.27
TNC-212ENST00000542877 PTMSP20962 102 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms