RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 NPM1P06748 294 aaKnown RBP eCLIP20.13■□□□□ 0.81
SRGAP1-205ENST00000542841 FAM69CQ0P6D2 419 aa20.13■□□□□ 0.81
SRGAP1-205ENST00000542841 ABCC10Q5T3U5 1492 aa20.1■□□□□ 0.81
SRGAP1-205ENST00000542841 MAPKBP1O60336 1514 aa20.05■□□□□ 0.8
SRGAP1-205ENST00000542841 RUSC2Q8N2Y8 1516 aa20.04■□□□□ 0.8
SRGAP1-205ENST00000542841 DIP2BQ9P265 1576 aa20.01■□□□□ 0.79
SRGAP1-205ENST00000542841 ADCY10Q96PN6 1610 aa19.98■□□□□ 0.79
SRGAP1-205ENST00000542841 KDM6BO15054 1643 aa19.95■□□□□ 0.78
SRGAP1-205ENST00000542841 KDM4FA0A1W2PPD8 638 aa19.94■□□□□ 0.78
SRGAP1-205ENST00000542841 KIAA0586Q9BVV6 1533 aa19.93■□□□□ 0.78
SRGAP1-205ENST00000542841 IGF1RP08069 1367 aa19.87■□□□□ 0.77
SRGAP1-205ENST00000542841 TSPOAP1O95153 1857 aa19.87■□□□□ 0.77
SRGAP1-205ENST00000542841 PTPRGP23470 1445 aa19.85■□□□□ 0.77
SRGAP1-205ENST00000542841 KIF27Q86VH2 1401 aa19.84■□□□□ 0.77
SRGAP1-205ENST00000542841 CUL7Q14999 1698 aa19.83■□□□□ 0.76
SRGAP1-205ENST00000542841 TTBK1Q5TCY1 1321 aaPredicted RBP19.8■□□□□ 0.76
SRGAP1-205ENST00000542841 CARMIL2Q6F5E8 1435 aa19.77■□□□□ 0.76
SRGAP1-205ENST00000542841 ABCC2Q92887 1545 aa19.77■□□□□ 0.76
SRGAP1-205ENST00000542841 TNIKQ9UKE5 1360 aa19.77■□□□□ 0.76
SRGAP1-205ENST00000542841 PLB1Q6P1J6 1458 aa19.75■□□□□ 0.75
SRGAP1-205ENST00000542841 ASXL2Q76L83 1435 aa19.75■□□□□ 0.75
SRGAP1-205ENST00000542841 ILDR1Q86SU0 546 aaPredicted RBP19.74■□□□□ 0.75
SRGAP1-205ENST00000542841 CARMIL1Q5VZK9 1371 aa19.73■□□□□ 0.75
SRGAP1-205ENST00000542841 GLI2P10070 1586 aa19.72■□□□□ 0.75
SRGAP1-205ENST00000542841 UHRF1BP1LA0JNW5 1464 aa19.68■□□□□ 0.74
SRGAP1-205ENST00000542841 ADGRL1O94910 1474 aa19.68■□□□□ 0.74
SRGAP1-205ENST00000542841 PPRC1Q5VV67 1664 aaKnown RBP19.68■□□□□ 0.74
SRGAP1-205ENST00000542841 IQGAP2Q13576 1575 aa19.67■□□□□ 0.74
SRGAP1-205ENST00000542841 UACAQ9BZF9 1416 aa19.67■□□□□ 0.74
SRGAP1-205ENST00000542841 EPRSP07814 1512 aaKnown RBP19.61■□□□□ 0.73
SRGAP1-205ENST00000542841 COL17A1Q9UMD9 1497 aaPredicted RBP19.61■□□□□ 0.73
SRGAP1-205ENST00000542841 DISP1Q96F81 1524 aa19.61■□□□□ 0.73
SRGAP1-205ENST00000542841 TEX14Q8IWB6 1497 aa19.6■□□□□ 0.73
SRGAP1-205ENST00000542841 KDM5BQ9UGL1 1544 aa19.6■□□□□ 0.73
SRGAP1-205ENST00000542841 MAP3K4Q9Y6R4 1608 aa19.58■□□□□ 0.73
SRGAP1-205ENST00000542841 ZCCHC11Q5TAX3 1644 aaKnown RBP19.54■□□□□ 0.72
SRGAP1-205ENST00000542841 UGGT2Q9NYU1 1516 aa19.53■□□□□ 0.72
SRGAP1-205ENST00000542841 HECW2Q9P2P5 1572 aa19.53■□□□□ 0.72
SRGAP1-205ENST00000542841 RAPGEF2Q9Y4G8 1499 aa19.5■□□□□ 0.71
SRGAP1-205ENST00000542841 WDR7Q9Y4E6 1490 aa19.49■□□□□ 0.71
SRGAP1-205ENST00000542841 KIAA0556O60303 1618 aa19.49■□□□□ 0.71
SRGAP1-205ENST00000542841 CD109Q6YHK3 1445 aa19.42■□□□□ 0.7
SRGAP1-205ENST00000542841 MAGI3Q5TCQ9 1506 aa19.41■□□□□ 0.7
SRGAP1-205ENST00000542841 KCNH8Q96L42 1107 aa19.4■□□□□ 0.7
SRGAP1-205ENST00000542841 CFAP43Q8NDM7 1665 aa19.38■□□□□ 0.69
SRGAP1-205ENST00000542841 GOLGA3Q08378 1498 aa19.37■□□□□ 0.69
SRGAP1-205ENST00000542841 CHIC1Q5VXU3 224 aa19.35■□□□□ 0.69
SRGAP1-205ENST00000542841 ABCA8O94911 1581 aa19.33■□□□□ 0.69
SRGAP1-205ENST00000542841 CTTNBP2Q8WZ74 1663 aa19.31■□□□□ 0.68
SRGAP1-205ENST00000542841 FAM9AQ8IZU1 332 aaPredicted RBP19.29■□□□□ 0.68
SRGAP1-205ENST00000542841 KIF21BO75037 1637 aa19.29■□□□□ 0.68
SRGAP1-205ENST00000542841 ARAP3Q8WWN8 1544 aa19.27■□□□□ 0.68
SRGAP1-205ENST00000542841 FBXO41Q8TF61 875 aa19.26■□□□□ 0.67
SRGAP1-205ENST00000542841 PHLDB1Q86UU1 1377 aa19.22■□□□□ 0.67
SRGAP1-205ENST00000542841 ARID3CA6NKF2 412 aa19.21■□□□□ 0.67
SRGAP1-205ENST00000542841 PTPRMP28827 1452 aa19.2■□□□□ 0.66
SRGAP1-205ENST00000542841 ATP10BO94823 1461 aa19.19■□□□□ 0.66
SRGAP1-205ENST00000542841 PRXQ9BXM0 1461 aa19.19■□□□□ 0.66
SRGAP1-205ENST00000542841 RAPGEF3O95398 923 aa19.17■□□□□ 0.66
SRGAP1-205ENST00000542841 ABCA9Q8IUA7 1624 aa19.16■□□□□ 0.66
SRGAP1-205ENST00000542841 P3H3Q8IVL6 736 aa19.16■□□□□ 0.66
SRGAP1-205ENST00000542841 ADAMTSL3P82987 1691 aa19.16■□□□□ 0.66
SRGAP1-205ENST00000542841 NEO1Q92859 1461 aa19.14■□□□□ 0.65
SRGAP1-205ENST00000542841 ARID4BQ4LE39 1312 aaPredicted RBP19.13■□□□□ 0.65
SRGAP1-205ENST00000542841 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.11■□□□□ 0.65
SRGAP1-205ENST00000542841 HNRNPUL2Q1KMD3 747 aaKnown RBP19.11■□□□□ 0.65
SRGAP1-205ENST00000542841 BCORL1Q5H9F3 1711 aa19.08■□□□□ 0.65
SRGAP1-205ENST00000542841 PCF11O94913 1555 aaKnown RBP19.08■□□□□ 0.65
SRGAP1-205ENST00000542841 RAPGEF6Q8TEU7 1601 aa19.06■□□□□ 0.64
SRGAP1-205ENST00000542841 MADDQ8WXG6 1647 aa19.06■□□□□ 0.64
SRGAP1-205ENST00000542841 LMTK3Q96Q04 1460 aa19.05■□□□□ 0.64
SRGAP1-205ENST00000542841 FRMPD1Q5SYB0 1578 aa19.05■□□□□ 0.64
SRGAP1-205ENST00000542841 SAMD9Q5K651 1589 aa19.03■□□□□ 0.64
SRGAP1-205ENST00000542841 DENND4BO75064 1496 aaPredicted RBP19■□□□□ 0.63
SRGAP1-205ENST00000542841 ARHGEF40Q8TER5 1519 aa19■□□□□ 0.63
SRGAP1-205ENST00000542841 NUP153P49790 1475 aaKnown RBP18.99■□□□□ 0.63
SRGAP1-205ENST00000542841 PLEKHD1A6NEE1 506 aa18.99■□□□□ 0.63
SRGAP1-205ENST00000542841 RIMS1Q86UR5 1692 aaKnown RBP18.98■□□□□ 0.63
SRGAP1-205ENST00000542841 CSRNP3Q8WYN3 585 aa18.97■□□□□ 0.63
SRGAP1-205ENST00000542841 AKNAQ7Z591 1439 aa18.97■□□□□ 0.63
SRGAP1-205ENST00000542841 FHOD3Q2V2M9 1422 aa18.96■□□□□ 0.63
SRGAP1-205ENST00000542841 POGZQ7Z3K3 1410 aa18.96■□□□□ 0.63
SRGAP1-205ENST00000542841 HSPA2P54652 639 aa18.95■□□□□ 0.62
SRGAP1-205ENST00000542841 FANCAO15360 1455 aa18.95■□□□□ 0.62
SRGAP1-205ENST00000542841 RICTORQ6R327 1708 aa18.94■□□□□ 0.62
SRGAP1-205ENST00000542841 RANGAP1P46060 587 aaPredicted RBP18.94■□□□□ 0.62
SRGAP1-205ENST00000542841 PLPPR3Q6T4P5 718 aa18.94■□□□□ 0.62
SRGAP1-205ENST00000542841 CFAP74Q9C0B2 1584 aa18.93■□□□□ 0.62
SRGAP1-205ENST00000542841 EFCAB5A4FU69 1503 aa18.9■□□□□ 0.62
SRGAP1-205ENST00000542841 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.9■□□□□ 0.62
SRGAP1-205ENST00000542841 ZMYM4Q5VZL5 1548 aa18.89■□□□□ 0.61
SRGAP1-205ENST00000542841 ZFYVE16Q7Z3T8 1539 aa18.89■□□□□ 0.61
SRGAP1-205ENST00000542841 CERKQ8TCT0 537 aa18.88■□□□□ 0.61
SRGAP1-205ENST00000542841 EEA1Q15075 1411 aa18.88■□□□□ 0.61
SRGAP1-205ENST00000542841 MAGI2Q86UL8 1455 aa18.88■□□□□ 0.61
SRGAP1-205ENST00000542841 YEATS2Q9ULM3 1422 aa18.87■□□□□ 0.61
SRGAP1-205ENST00000542841 MLECQ14165 292 aa18.86■□□□□ 0.61
SRGAP1-205ENST00000542841 TTC37Q6PGP7 1564 aa18.85■□□□□ 0.61
SRGAP1-205ENST00000542841 SIGLEC1Q9BZZ2 1709 aa18.83■□□□□ 0.6
SRGAP1-205ENST00000542841 SCAPERQ9BY12 1400 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms