RNA–Protein interactions for RNA: ENST00000542335.5

PDE1B-204, Transcript of phosphodiesterase 1B, humanhuman

TSL 2

Gene PDE1B, Length 2,782 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-204ENST00000542335 GTF3C3Q9Y5Q9 886 aa17.93■□□□□ 0.46
PDE1B-204ENST00000542335 AQRO60306 1485 aaKnown RBP eCLIP17.93■□□□□ 0.46
PDE1B-204ENST00000542335 TARBP1Q13395 1621 aaKnown RBP17.93■□□□□ 0.46
PDE1B-204ENST00000542335 P3H3Q8IVL6 736 aa17.91■□□□□ 0.46
PDE1B-204ENST00000542335 ABCA5Q8WWZ7 1642 aa17.91■□□□□ 0.46
PDE1B-204ENST00000542335 HNRNPUL2Q1KMD3 747 aaKnown RBP17.91■□□□□ 0.46
PDE1B-204ENST00000542335 BCL11AQ9H165 835 aa17.9■□□□□ 0.46
PDE1B-204ENST00000542335 RRBP1Q9P2E9 1410 aaKnown RBP17.89■□□□□ 0.45
PDE1B-204ENST00000542335 MAP3K1Q13233 1512 aa17.89■□□□□ 0.45
PDE1B-204ENST00000542335 WDR62O43379 1518 aa17.88■□□□□ 0.45
PDE1B-204ENST00000542335 CUL7Q14999 1698 aa17.88■□□□□ 0.45
PDE1B-204ENST00000542335 ZNF608Q9ULD9 1512 aaPredicted RBP17.86■□□□□ 0.45
PDE1B-204ENST00000542335 ERICH6Q7L0X2 663 aa17.84■□□□□ 0.45
PDE1B-204ENST00000542335 KANK4Q5T7N3 995 aaPredicted RBP17.83■□□□□ 0.45
PDE1B-204ENST00000542335 TIAM1Q13009 1591 aa17.83■□□□□ 0.44
PDE1B-204ENST00000542335 IFT140Q96RY7 1462 aa17.82■□□□□ 0.44
PDE1B-204ENST00000542335 DIEXFQ68CQ4 756 aaKnown RBP17.81■□□□□ 0.44
PDE1B-204ENST00000542335 THOC2Q8NI27 1593 aaKnown RBP17.81■□□□□ 0.44
PDE1B-204ENST00000542335 ATP1B4Q9UN42 357 aaPredicted RBP17.8■□□□□ 0.44
PDE1B-204ENST00000542335 CFAP43Q8NDM7 1665 aa17.8■□□□□ 0.44
PDE1B-204ENST00000542335 CTTNBP2Q8WZ74 1663 aa17.8■□□□□ 0.44
PDE1B-204ENST00000542335 PBRM1Q86U86 1689 aa17.79■□□□□ 0.44
PDE1B-204ENST00000542335 CLSPNQ9HAW4 1339 aa17.79■□□□□ 0.44
PDE1B-204ENST00000542335 ZNF316A6NFI3 1004 aaPredicted RBP17.77■□□□□ 0.44
PDE1B-204ENST00000542335 EFCAB5A4FU69 1503 aa17.76■□□□□ 0.43
PDE1B-204ENST00000542335 GRIN2BQ13224 1484 aa17.76■□□□□ 0.43
PDE1B-204ENST00000542335 FHAD1B1AJZ9 1412 aa17.75■□□□□ 0.43
PDE1B-204ENST00000542335 CCNB3Q8WWL7 1395 aa17.74■□□□□ 0.43
PDE1B-204ENST00000542335 FHOD3Q2V2M9 1422 aa17.73■□□□□ 0.43
PDE1B-204ENST00000542335 CENPBP07199 599 aaPredicted RBP17.73■□□□□ 0.43
PDE1B-204ENST00000542335 FBLN2P98095 1184 aa17.73■□□□□ 0.43
PDE1B-204ENST00000542335 DHX57Q6P158 1386 aaKnown RBP17.72■□□□□ 0.43
PDE1B-204ENST00000542335 PCF11O94913 1555 aaKnown RBP17.72■□□□□ 0.43
PDE1B-204ENST00000542335 EIF4G3O43432 1585 aaKnown RBP17.71■□□□□ 0.43
PDE1B-204ENST00000542335 LRRC9Q6ZRR7 1453 aa17.71■□□□□ 0.42
PDE1B-204ENST00000542335 SNAPC4Q5SXM2 1469 aa17.69■□□□□ 0.42
PDE1B-204ENST00000542335 ADAMTS12P58397 1594 aa17.69■□□□□ 0.42
PDE1B-204ENST00000542335 FYCO1Q9BQS8 1478 aa17.67■□□□□ 0.42
PDE1B-204ENST00000542335 CHMP7Q8WUX9 453 aaPredicted RBP17.65■□□□□ 0.42
PDE1B-204ENST00000542335 CASKIN1Q8WXD9 1431 aa17.62■□□□□ 0.41
PDE1B-204ENST00000542335 SAMD9Q5K651 1589 aa17.61■□□□□ 0.41
PDE1B-204ENST00000542335 YTHDC1Q96MU7 727 aaKnown RBP17.61■□□□□ 0.41
PDE1B-204ENST00000542335 SLC24A1O60721 1099 aa17.59■□□□□ 0.41
PDE1B-204ENST00000542335 IQGAP2Q13576 1575 aa17.57■□□□□ 0.4
PDE1B-204ENST00000542335 PHLDB1Q86UU1 1377 aa17.57■□□□□ 0.4
PDE1B-204ENST00000542335 GRIN2AQ12879 1464 aa17.56■□□□□ 0.4
PDE1B-204ENST00000542335 FMN1Q68DA7 1419 aa17.56■□□□□ 0.4
PDE1B-204ENST00000542335 MAGI1Q96QZ7 1491 aaPredicted RBP17.55■□□□□ 0.4
PDE1B-204ENST00000542335 ARID3CA6NKF2 412 aa17.53■□□□□ 0.4
PDE1B-204ENST00000542335 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.52■□□□□ 0.4
PDE1B-204ENST00000542335 SYNJ2O15056 1496 aa17.52■□□□□ 0.4
PDE1B-204ENST00000542335 RAB3GAP2Q9H2M9 1393 aa17.52■□□□□ 0.4
PDE1B-204ENST00000542335 LRRIQ1Q96JM4 1722 aa17.52■□□□□ 0.39
PDE1B-204ENST00000542335 ITGAEP38570 1179 aa17.51■□□□□ 0.39
PDE1B-204ENST00000542335 SETD5Q9C0A6 1442 aa17.5■□□□□ 0.39
PDE1B-204ENST00000542335 MAPKBP1O60336 1514 aa17.5■□□□□ 0.39
PDE1B-204ENST00000542335 KIAA0586Q9BVV6 1533 aa17.49■□□□□ 0.39
PDE1B-204ENST00000542335 CEP170Q5SW79 1584 aa17.45■□□□□ 0.38
PDE1B-204ENST00000542335 MTUS2Q5JR59 1369 aa17.42■□□□□ 0.38
PDE1B-204ENST00000542335 UGGT2Q9NYU1 1516 aa17.42■□□□□ 0.38
PDE1B-204ENST00000542335 FAM50AQ14320 339 aaKnown RBP17.41■□□□□ 0.38
PDE1B-204ENST00000542335 JPH4Q96JJ6 628 aa17.41■□□□□ 0.38
PDE1B-204ENST00000542335 MIER1Q8N108 512 aa17.41■□□□□ 0.38
PDE1B-204ENST00000542335 SUPT6HQ7KZ85 1726 aaKnown RBP17.41■□□□□ 0.38
PDE1B-204ENST00000542335 FGD6Q6ZV73 1430 aa17.4■□□□□ 0.38
PDE1B-204ENST00000542335 EHBP1L1Q8N3D4 1523 aa17.4■□□□□ 0.38
PDE1B-204ENST00000542335 DISP1Q96F81 1524 aa17.39■□□□□ 0.38
PDE1B-204ENST00000542335 KIAA0556O60303 1618 aa17.37■□□□□ 0.37
PDE1B-204ENST00000542335 NUP160Q12769 1436 aa17.36■□□□□ 0.37
PDE1B-204ENST00000542335 CCDC18Q5T9S5 1454 aa17.36■□□□□ 0.37
PDE1B-204ENST00000542335 HECW1Q76N89 1606 aa17.35■□□□□ 0.37
PDE1B-204ENST00000542335 ARHGEF11O15085 1522 aa17.35■□□□□ 0.37
PDE1B-204ENST00000542335 NCOA2Q15596 1464 aa17.34■□□□□ 0.37
PDE1B-204ENST00000542335 CDK13Q14004 1512 aaKnown RBP17.32■□□□□ 0.36
PDE1B-204ENST00000542335 MYOM3Q5VTT5 1437 aa17.32■□□□□ 0.36
PDE1B-204ENST00000542335 CHD1O14646 1710 aa17.31■□□□□ 0.36
PDE1B-204ENST00000542335 CARMIL2Q6F5E8 1435 aa17.31■□□□□ 0.36
PDE1B-204ENST00000542335 EPRSP07814 1512 aaKnown RBP17.31■□□□□ 0.36
PDE1B-204ENST00000542335 PTPN23Q9H3S7 1636 aa17.3■□□□□ 0.36
PDE1B-204ENST00000542335 TIMELESSQ9UNS1 1208 aa17.29■□□□□ 0.36
PDE1B-204ENST00000542335 HFM1A2PYH4 1435 aa17.29■□□□□ 0.36
PDE1B-204ENST00000542335 MAGI3Q5TCQ9 1506 aa17.28■□□□□ 0.36
PDE1B-204ENST00000542335 PLB1Q6P1J6 1458 aa17.27■□□□□ 0.35
PDE1B-204ENST00000542335 PRG4Q92954 1404 aaPredicted RBP17.25■□□□□ 0.35
PDE1B-204ENST00000542335 TCOF1Q13428 1488 aaKnown RBP17.25■□□□□ 0.35
PDE1B-204ENST00000542335 PTPRKQ15262 1439 aa17.24■□□□□ 0.35
PDE1B-204ENST00000542335 GCC2Q8IWJ2 1684 aa17.24■□□□□ 0.35
PDE1B-204ENST00000542335 RAPGEF6Q8TEU7 1601 aa17.24■□□□□ 0.35
PDE1B-204ENST00000542335 NUP153P49790 1475 aaKnown RBP17.23■□□□□ 0.35
PDE1B-204ENST00000542335 UACAQ9BZF9 1416 aa17.22■□□□□ 0.35
PDE1B-204ENST00000542335 NAIPQ13075 1403 aa17.2■□□□□ 0.34
PDE1B-204ENST00000542335 CDK11AQ9UQ88 783 aaPredicted RBP17.19■□□□□ 0.34
PDE1B-204ENST00000542335 AKNAQ7Z591 1439 aa17.18■□□□□ 0.34
PDE1B-204ENST00000542335 SIN3AQ96ST3 1273 aa17.17■□□□□ 0.34
PDE1B-204ENST00000542335 PTPRGP23470 1445 aa17.17■□□□□ 0.34
PDE1B-204ENST00000542335 MIA2Q96PC5 1412 aa17.17■□□□□ 0.34
PDE1B-204ENST00000542335 CHIC2Q9UKJ5 165 aa17.12■□□□□ 0.33
PDE1B-204ENST00000542335 ERCC6L2Q5T890 1561 aa17.11■□□□□ 0.33
PDE1B-204ENST00000542335 PPP1R15AO75807 674 aaPredicted RBP17.11■□□□□ 0.33
PDE1B-204ENST00000542335 PLEKHD1A6NEE1 506 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms