RNA–Protein interactions for RNA: ENST00000542296.6

CERS1-202, Transcript of ceramide synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CERS1, Length 1,947 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERS1-202ENST00000542296 RANGAP1P46060 587 aaPredicted RBP32.61■■■□□ 2.81
CERS1-202ENST00000542296 SYNJ2O15056 1496 aa32.55■■■□□ 2.8
CERS1-202ENST00000542296 EFCAB5A4FU69 1503 aa32.54■■■□□ 2.8
CERS1-202ENST00000542296 GRIN2AQ12879 1464 aa32.54■■■□□ 2.8
CERS1-202ENST00000542296 PCGF6Q9BYE7 350 aa32.5■■■□□ 2.79
CERS1-202ENST00000542296 TRIM26Q12899 539 aaPredicted RBP32.45■■■□□ 2.79
CERS1-202ENST00000542296 IQGAP2Q13576 1575 aa32.44■■■□□ 2.78
CERS1-202ENST00000542296 SAMD9Q5K651 1589 aa32.44■■■□□ 2.78
CERS1-202ENST00000542296 KIAA0586Q9BVV6 1533 aa32.39■■■□□ 2.78
CERS1-202ENST00000542296 CHMP7Q8WUX9 453 aaPredicted RBP32.38■■■□□ 2.77
CERS1-202ENST00000542296 NUP160Q12769 1436 aa32.33■■■□□ 2.77
CERS1-202ENST00000542296 CEP170Q5SW79 1584 aa32.33■■■□□ 2.77
CERS1-202ENST00000542296 UGGT2Q9NYU1 1516 aa32.32■■■□□ 2.76
CERS1-202ENST00000542296 FHOD3Q2V2M9 1422 aa32.29■■■□□ 2.76
CERS1-202ENST00000542296 PPARGC1BQ86YN6 1023 aaKnown RBP32.26■■■□□ 2.76
CERS1-202ENST00000542296 APLP2Q06481 763 aa32.23■■■□□ 2.75
CERS1-202ENST00000542296 P3H3Q8IVL6 736 aa32.23■■■□□ 2.75
CERS1-202ENST00000542296 FBLN2P98095 1184 aa32.22■■■□□ 2.75
CERS1-202ENST00000542296 FMN1Q68DA7 1419 aa32.22■■■□□ 2.75
CERS1-202ENST00000542296 CHD1O14646 1710 aa32.2■■■□□ 2.74
CERS1-202ENST00000542296 MAP3K1Q13233 1512 aa32.2■■■□□ 2.74
CERS1-202ENST00000542296 PCF11O94913 1555 aaKnown RBP32.17■■■□□ 2.74
CERS1-202ENST00000542296 FYCO1Q9BQS8 1478 aa32.16■■■□□ 2.74
CERS1-202ENST00000542296 CASKIN1Q8WXD9 1431 aa32.16■■■□□ 2.74
CERS1-202ENST00000542296 DISP1Q96F81 1524 aa32.13■■■□□ 2.73
CERS1-202ENST00000542296 KIAA0556O60303 1618 aa32.11■■■□□ 2.73
CERS1-202ENST00000542296 TIAM1Q13009 1591 aa32.08■■■□□ 2.73
CERS1-202ENST00000542296 CFAP43Q8NDM7 1665 aa32.04■■■□□ 2.72
CERS1-202ENST00000542296 JPH4Q96JJ6 628 aa32.02■■■□□ 2.72
CERS1-202ENST00000542296 KANK4Q5T7N3 995 aaPredicted RBP32■■■□□ 2.71
CERS1-202ENST00000542296 TTBK1Q5TCY1 1321 aaPredicted RBP31.98■■■□□ 2.71
CERS1-202ENST00000542296 HRCP23327 699 aa31.97■■■□□ 2.71
CERS1-202ENST00000542296 CARMIL2Q6F5E8 1435 aa31.95■■■□□ 2.71
CERS1-202ENST00000542296 LRRC9Q6ZRR7 1453 aa31.93■■■□□ 2.7
CERS1-202ENST00000542296 SHROOM2Q13796 1616 aa31.93■■■□□ 2.7
CERS1-202ENST00000542296 LRRIQ1Q96JM4 1722 aa31.93■■■□□ 2.7
CERS1-202ENST00000542296 HECW1Q76N89 1606 aa31.89■■■□□ 2.7
CERS1-202ENST00000542296 CLASP1Q7Z460 1538 aa31.87■■■□□ 2.69
CERS1-202ENST00000542296 ATP1B4Q9UN42 357 aaPredicted RBP31.84■■■□□ 2.69
CERS1-202ENST00000542296 CCDC18Q5T9S5 1454 aa31.83■■■□□ 2.69
CERS1-202ENST00000542296 PRG4Q92954 1404 aaPredicted RBP31.81■■■□□ 2.68
CERS1-202ENST00000542296 RAPGEF6Q8TEU7 1601 aa31.79■■■□□ 2.68
CERS1-202ENST00000542296 EPRSP07814 1512 aaKnown RBP31.77■■■□□ 2.68
CERS1-202ENST00000542296 NUP153P49790 1475 aaKnown RBP31.72■■■□□ 2.67
CERS1-202ENST00000542296 RRBP1Q9P2E9 1410 aaKnown RBP31.71■■■□□ 2.67
CERS1-202ENST00000542296 ABCA8O94911 1581 aa31.68■■■□□ 2.66
CERS1-202ENST00000542296 PLB1Q6P1J6 1458 aa31.67■■■□□ 2.66
CERS1-202ENST00000542296 EHBP1L1Q8N3D4 1523 aa31.66■■■□□ 2.66
CERS1-202ENST00000542296 MTUS2Q5JR59 1369 aa31.65■■■□□ 2.66
CERS1-202ENST00000542296 CDK13Q14004 1512 aaKnown RBP31.64■■■□□ 2.65
CERS1-202ENST00000542296 MAGI3Q5TCQ9 1506 aa31.63■■■□□ 2.65
CERS1-202ENST00000542296 PTPRGP23470 1445 aa31.62■■■□□ 2.65
CERS1-202ENST00000542296 ERCC6L2Q5T890 1561 aa31.6■■■□□ 2.65
CERS1-202ENST00000542296 PHLDB1Q86UU1 1377 aa31.6■■■□□ 2.65
CERS1-202ENST00000542296 SUPT6HQ7KZ85 1726 aaKnown RBP31.58■■■□□ 2.65
CERS1-202ENST00000542296 CCNB3Q8WWL7 1395 aa31.56■■■□□ 2.64
CERS1-202ENST00000542296 ARHGEF11O15085 1522 aa31.55■■■□□ 2.64
CERS1-202ENST00000542296 NCOA2Q15596 1464 aa31.52■■■□□ 2.64
CERS1-202ENST00000542296 OSCARQ8IYS5 282 aa31.5■■■□□ 2.63
CERS1-202ENST00000542296 UACAQ9BZF9 1416 aa31.46■■■□□ 2.63
CERS1-202ENST00000542296 CDK11AQ9UQ88 783 aaPredicted RBP31.46■■■□□ 2.63
CERS1-202ENST00000542296 ATP10BO94823 1461 aa31.44■■■□□ 2.62
CERS1-202ENST00000542296 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.43■■■□□ 2.62
CERS1-202ENST00000542296 ZEB1P37275 1124 aaPredicted RBP31.43■■■□□ 2.62
CERS1-202ENST00000542296 ARID3CA6NKF2 412 aa31.42■■■□□ 2.62
CERS1-202ENST00000542296 MYOM3Q5VTT5 1437 aa31.41■■■□□ 2.62
CERS1-202ENST00000542296 FGD6Q6ZV73 1430 aa31.4■■■□□ 2.62
CERS1-202ENST00000542296 TROQ12816 1431 aaPredicted RBP31.4■■■□□ 2.62
CERS1-202ENST00000542296 ABCC2Q92887 1545 aa31.39■■■□□ 2.62
CERS1-202ENST00000542296 HNRNPUL2Q1KMD3 747 aaKnown RBP31.37■■■□□ 2.61
CERS1-202ENST00000542296 ADCY10Q96PN6 1610 aa31.36■■■□□ 2.61
CERS1-202ENST00000542296 UHRF1BP1LA0JNW5 1464 aa31.35■■■□□ 2.61
CERS1-202ENST00000542296 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.34■■■□□ 2.61
CERS1-202ENST00000542296 MIA2Q96PC5 1412 aa31.28■■■□□ 2.6
CERS1-202ENST00000542296 PLEKHD1A6NEE1 506 aa31.26■■■□□ 2.59
CERS1-202ENST00000542296 PTPN23Q9H3S7 1636 aa31.25■■■□□ 2.59
CERS1-202ENST00000542296 TCOF1Q13428 1488 aaKnown RBP31.24■■■□□ 2.59
CERS1-202ENST00000542296 KIF14Q15058 1648 aa31.23■■■□□ 2.59
CERS1-202ENST00000542296 FAM50AQ14320 339 aaKnown RBP31.22■■■□□ 2.59
CERS1-202ENST00000542296 KDM5BQ9UGL1 1544 aa31.22■■■□□ 2.59
CERS1-202ENST00000542296 ZCCHC11Q5TAX3 1644 aaKnown RBP31.17■■■□□ 2.58
CERS1-202ENST00000542296 ITSN2Q9NZM3 1697 aa31.16■■■□□ 2.58
CERS1-202ENST00000542296 ABCC10Q5T3U5 1492 aa31.16■■■□□ 2.58
CERS1-202ENST00000542296 GPATCH8Q9UKJ3 1502 aaKnown RBP31.13■■■□□ 2.57
CERS1-202ENST00000542296 ITGAEP38570 1179 aa31.1■■■□□ 2.57
CERS1-202ENST00000542296 CDC42BPAQ5VT25 1732 aa31.08■■■□□ 2.57
CERS1-202ENST00000542296 CCER1Q8TC90 406 aaPredicted RBP31.06■■■□□ 2.56
CERS1-202ENST00000542296 PTPRKQ15262 1439 aa31.03■■■□□ 2.56
CERS1-202ENST00000542296 SETD5Q9C0A6 1442 aa30.99■■■□□ 2.55
CERS1-202ENST00000542296 CFDP1Q9UEE9 299 aaPredicted RBP30.98■■■□□ 2.55
CERS1-202ENST00000542296 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.97■■■□□ 2.55
CERS1-202ENST00000542296 DNMT1P26358 1616 aaKnown RBP30.96■■■□□ 2.55
CERS1-202ENST00000542296 CAMSAP2Q08AD1 1489 aa30.95■■■□□ 2.55
CERS1-202ENST00000542296 PREX2Q70Z35 1606 aa30.95■■■□□ 2.54
CERS1-202ENST00000542296 RAB3GAP2Q9H2M9 1393 aa30.94■■■□□ 2.54
CERS1-202ENST00000542296 HFM1A2PYH4 1435 aa30.93■■■□□ 2.54
CERS1-202ENST00000542296 TTC37Q6PGP7 1564 aa30.93■■■□□ 2.54
CERS1-202ENST00000542296 CDC42BPBQ9Y5S2 1711 aa30.93■■■□□ 2.54
CERS1-202ENST00000542296 ZNF644Q9H582 1327 aaPredicted RBP30.91■■■□□ 2.54
CERS1-202ENST00000542296 AKNAQ7Z591 1439 aa30.9■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms