RNA–Protein interactions for RNA: ENST00000541960.5

GABARAPL1-210, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 3

Gene GABARAPL1, Length 3,214 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-210ENST00000541960 CTTNBP2Q8WZ74 1663 aa27.18■■□□□ 1.94
GABARAPL1-210ENST00000541960 GRIN2BQ13224 1484 aa27.1■■□□□ 1.93
GABARAPL1-210ENST00000541960 KANK4Q5T7N3 995 aaPredicted RBP27.09■■□□□ 1.93
GABARAPL1-210ENST00000541960 ADAMTS12P58397 1594 aa27.09■■□□□ 1.93
GABARAPL1-210ENST00000541960 FHAD1B1AJZ9 1412 aa27.09■■□□□ 1.93
GABARAPL1-210ENST00000541960 P3H3Q8IVL6 736 aa27.09■■□□□ 1.93
GABARAPL1-210ENST00000541960 EFCAB5A4FU69 1503 aa27.06■■□□□ 1.92
GABARAPL1-210ENST00000541960 FHOD3Q2V2M9 1422 aa27.05■■□□□ 1.92
GABARAPL1-210ENST00000541960 EIF4G3O43432 1585 aaKnown RBP27.03■■□□□ 1.92
GABARAPL1-210ENST00000541960 PCF11O94913 1555 aaKnown RBP26.97■■□□□ 1.91
GABARAPL1-210ENST00000541960 SAMD9Q5K651 1589 aa26.96■■□□□ 1.91
GABARAPL1-210ENST00000541960 SNAPC4Q5SXM2 1469 aa26.95■■□□□ 1.9
GABARAPL1-210ENST00000541960 TIAM1Q13009 1591 aa26.93■■□□□ 1.9
GABARAPL1-210ENST00000541960 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.92■■□□□ 1.9
GABARAPL1-210ENST00000541960 MAP3K1Q13233 1512 aa26.92■■□□□ 1.9
GABARAPL1-210ENST00000541960 ZEB1P37275 1124 aaPredicted RBP26.86■■□□□ 1.89
GABARAPL1-210ENST00000541960 CASKIN1Q8WXD9 1431 aa26.86■■□□□ 1.89
GABARAPL1-210ENST00000541960 FYCO1Q9BQS8 1478 aa26.86■■□□□ 1.89
GABARAPL1-210ENST00000541960 IQGAP2Q13576 1575 aa26.85■■□□□ 1.89
GABARAPL1-210ENST00000541960 HNRNPUL2Q1KMD3 747 aaKnown RBP26.84■■□□□ 1.89
GABARAPL1-210ENST00000541960 FMN1Q68DA7 1419 aa26.83■■□□□ 1.89
GABARAPL1-210ENST00000541960 CFAP43Q8NDM7 1665 aa26.83■■□□□ 1.89
GABARAPL1-210ENST00000541960 LRRC9Q6ZRR7 1453 aa26.82■■□□□ 1.88
GABARAPL1-210ENST00000541960 GRIN2AQ12879 1464 aa26.81■■□□□ 1.88
GABARAPL1-210ENST00000541960 MAGI1Q96QZ7 1491 aaPredicted RBP26.81■■□□□ 1.88
GABARAPL1-210ENST00000541960 ATP1B4Q9UN42 357 aaPredicted RBP26.8■■□□□ 1.88
GABARAPL1-210ENST00000541960 RRBP1Q9P2E9 1410 aaKnown RBP26.78■■□□□ 1.88
GABARAPL1-210ENST00000541960 CCER1Q8TC90 406 aaPredicted RBP26.77■■□□□ 1.88
GABARAPL1-210ENST00000541960 SYNJ2O15056 1496 aa26.74■■□□□ 1.87
GABARAPL1-210ENST00000541960 KIAA0586Q9BVV6 1533 aa26.73■■□□□ 1.87
GABARAPL1-210ENST00000541960 UGGT2Q9NYU1 1516 aa26.72■■□□□ 1.87
GABARAPL1-210ENST00000541960 LRRIQ1Q96JM4 1722 aa26.7■■□□□ 1.86
GABARAPL1-210ENST00000541960 CHMP7Q8WUX9 453 aaPredicted RBP26.69■■□□□ 1.86
GABARAPL1-210ENST00000541960 CEP170Q5SW79 1584 aa26.68■■□□□ 1.86
GABARAPL1-210ENST00000541960 CCNB3Q8WWL7 1395 aa26.67■■□□□ 1.86
GABARAPL1-210ENST00000541960 PHLDB1Q86UU1 1377 aa26.67■■□□□ 1.86
GABARAPL1-210ENST00000541960 DISP1Q96F81 1524 aa26.63■■□□□ 1.85
GABARAPL1-210ENST00000541960 FBLN2P98095 1184 aa26.63■■□□□ 1.85
GABARAPL1-210ENST00000541960 KIAA0556O60303 1618 aa26.6■■□□□ 1.85
GABARAPL1-210ENST00000541960 NUP160Q12769 1436 aa26.59■■□□□ 1.85
GABARAPL1-210ENST00000541960 HECW1Q76N89 1606 aa26.52■■□□□ 1.84
GABARAPL1-210ENST00000541960 MTUS2Q5JR59 1369 aa26.51■■□□□ 1.83
GABARAPL1-210ENST00000541960 MAGI3Q5TCQ9 1506 aa26.5■■□□□ 1.83
GABARAPL1-210ENST00000541960 CCDC18Q5T9S5 1454 aa26.48■■□□□ 1.83
GABARAPL1-210ENST00000541960 EPRSP07814 1512 aaKnown RBP26.47■■□□□ 1.83
GABARAPL1-210ENST00000541960 ITGAEP38570 1179 aa26.47■■□□□ 1.83
GABARAPL1-210ENST00000541960 CDK13Q14004 1512 aaKnown RBP26.45■■□□□ 1.82
GABARAPL1-210ENST00000541960 JPH4Q96JJ6 628 aa26.44■■□□□ 1.82
GABARAPL1-210ENST00000541960 EHBP1L1Q8N3D4 1523 aa26.44■■□□□ 1.82
GABARAPL1-210ENST00000541960 NCOA2Q15596 1464 aa26.42■■□□□ 1.82
GABARAPL1-210ENST00000541960 FAM50AQ14320 339 aaKnown RBP26.41■■□□□ 1.82
GABARAPL1-210ENST00000541960 ARID3CA6NKF2 412 aa26.4■■□□□ 1.82
GABARAPL1-210ENST00000541960 FGD6Q6ZV73 1430 aa26.39■■□□□ 1.81
GABARAPL1-210ENST00000541960 SUPT6HQ7KZ85 1726 aaKnown RBP26.38■■□□□ 1.81
GABARAPL1-210ENST00000541960 NUP153P49790 1475 aaKnown RBP26.38■■□□□ 1.81
GABARAPL1-210ENST00000541960 CHD1O14646 1710 aa26.37■■□□□ 1.81
GABARAPL1-210ENST00000541960 ARHGEF11O15085 1522 aa26.37■■□□□ 1.81
GABARAPL1-210ENST00000541960 RAPGEF6Q8TEU7 1601 aa26.37■■□□□ 1.81
GABARAPL1-210ENST00000541960 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.34■■□□□ 1.81
GABARAPL1-210ENST00000541960 CARMIL2Q6F5E8 1435 aa26.34■■□□□ 1.81
GABARAPL1-210ENST00000541960 DHX57Q6P158 1386 aaKnown RBP26.33■■□□□ 1.81
GABARAPL1-210ENST00000541960 MYOM3Q5VTT5 1437 aa26.32■■□□□ 1.8
GABARAPL1-210ENST00000541960 PLB1Q6P1J6 1458 aa26.32■■□□□ 1.8
GABARAPL1-210ENST00000541960 RAB3GAP2Q9H2M9 1393 aa26.27■■□□□ 1.8
GABARAPL1-210ENST00000541960 PRG4Q92954 1404 aaPredicted RBP26.23■■□□□ 1.79
GABARAPL1-210ENST00000541960 SETD5Q9C0A6 1442 aa26.23■■□□□ 1.79
GABARAPL1-210ENST00000541960 PTPRKQ15262 1439 aa26.2■■□□□ 1.78
GABARAPL1-210ENST00000541960 PTPN23Q9H3S7 1636 aa26.2■■□□□ 1.78
GABARAPL1-210ENST00000541960 ABCA8O94911 1581 aa26.18■■□□□ 1.78
GABARAPL1-210ENST00000541960 SHROOM2Q13796 1616 aa26.16■■□□□ 1.78
GABARAPL1-210ENST00000541960 CLSPNQ9HAW4 1339 aa26.15■■□□□ 1.78
GABARAPL1-210ENST00000541960 TCOF1Q13428 1488 aaKnown RBP26.15■■□□□ 1.78
GABARAPL1-210ENST00000541960 CDK11AQ9UQ88 783 aaPredicted RBP26.1■■□□□ 1.77
GABARAPL1-210ENST00000541960 TROQ12816 1431 aaPredicted RBP26.1■■□□□ 1.77
GABARAPL1-210ENST00000541960 MIA2Q96PC5 1412 aa26.09■■□□□ 1.77
GABARAPL1-210ENST00000541960 PTPRGP23470 1445 aa26.09■■□□□ 1.77
GABARAPL1-210ENST00000541960 ERCC6L2Q5T890 1561 aa26.08■■□□□ 1.77
GABARAPL1-210ENST00000541960 ATP10BO94823 1461 aa26.06■■□□□ 1.76
GABARAPL1-210ENST00000541960 MAPKBP1O60336 1514 aa26.05■■□□□ 1.76
GABARAPL1-210ENST00000541960 CLASP1Q7Z460 1538 aa26.05■■□□□ 1.76
GABARAPL1-210ENST00000541960 HFM1A2PYH4 1435 aa26.04■■□□□ 1.76
GABARAPL1-210ENST00000541960 KIF14Q15058 1648 aa26.03■■□□□ 1.76
GABARAPL1-210ENST00000541960 ADCY10Q96PN6 1610 aa26.01■■□□□ 1.75
GABARAPL1-210ENST00000541960 NAIPQ13075 1403 aa26■■□□□ 1.75
GABARAPL1-210ENST00000541960 ZNF644Q9H582 1327 aaPredicted RBP25.97■■□□□ 1.75
GABARAPL1-210ENST00000541960 GPATCH8Q9UKJ3 1502 aaKnown RBP25.95■■□□□ 1.74
GABARAPL1-210ENST00000541960 UACAQ9BZF9 1416 aa25.95■■□□□ 1.74
GABARAPL1-210ENST00000541960 CHIC2Q9UKJ5 165 aa25.94■■□□□ 1.74
GABARAPL1-210ENST00000541960 PLEKHD1A6NEE1 506 aa25.93■■□□□ 1.74
GABARAPL1-210ENST00000541960 RRP7BPQ9NSQ0 103 aa25.9■■□□□ 1.74
GABARAPL1-210ENST00000541960 ABCC10Q5T3U5 1492 aa25.89■■□□□ 1.74
GABARAPL1-210ENST00000541960 DAPK1P53355 1430 aa25.89■■□□□ 1.74
GABARAPL1-210ENST00000541960 ITSN2Q9NZM3 1697 aa25.89■■□□□ 1.73
GABARAPL1-210ENST00000541960 ABCC5O15440 1437 aa25.88■■□□□ 1.73
GABARAPL1-210ENST00000541960 DNMT1P26358 1616 aaKnown RBP25.88■■□□□ 1.73
GABARAPL1-210ENST00000541960 CFDP1Q9UEE9 299 aaPredicted RBP25.87■■□□□ 1.73
GABARAPL1-210ENST00000541960 AKNAQ7Z591 1439 aa25.87■■□□□ 1.73
GABARAPL1-210ENST00000541960 CAMSAP2Q08AD1 1489 aa25.86■■□□□ 1.73
GABARAPL1-210ENST00000541960 GCC2Q8IWJ2 1684 aa25.86■■□□□ 1.73
GABARAPL1-210ENST00000541960 ABCC2Q92887 1545 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms