RNA–Protein interactions for RNA: ENST00000541124.5

PSME3-203, Transcript of proteasome activator subunit 3, humanhuman

TSL 1 (best) BASIC

Gene PSME3, Length 3,366 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-203ENST00000541124 ARID3CA6NKF2 412 aa19.75■□□□□ 0.75
PSME3-203ENST00000541124 TONSLQ96HA7 1378 aa19.69■□□□□ 0.74
PSME3-203ENST00000541124 FAM9BQ8IZU0 186 aa19.68■□□□□ 0.74
PSME3-203ENST00000541124 CHIC2Q9UKJ5 165 aa19.67■□□□□ 0.74
PSME3-203ENST00000541124 CDK11AQ9UQ88 783 aaPredicted RBP19.67■□□□□ 0.74
PSME3-203ENST00000541124 PEG3Q9GZU2 1588 aa19.67■□□□□ 0.74
PSME3-203ENST00000541124 KIF27Q86VH2 1401 aa19.66■□□□□ 0.74
PSME3-203ENST00000541124 SETD5Q9C0A6 1442 aa19.63■□□□□ 0.73
PSME3-203ENST00000541124 WDR97A6NE52 1622 aa19.59■□□□□ 0.73
PSME3-203ENST00000541124 PPP1R15AO75807 674 aaPredicted RBP19.58■□□□□ 0.72
PSME3-203ENST00000541124 RRP7BPQ9NSQ0 103 aa19.57■□□□□ 0.72
PSME3-203ENST00000541124 RRBP1Q9P2E9 1410 aaKnown RBP19.57■□□□□ 0.72
PSME3-203ENST00000541124 PHLDB1Q86UU1 1377 aa19.57■□□□□ 0.72
PSME3-203ENST00000541124 NBR1Q14596 966 aa19.56■□□□□ 0.72
PSME3-203ENST00000541124 TOP2BQ02880 1626 aa19.55■□□□□ 0.72
PSME3-203ENST00000541124 B4GALNT3Q6L9W6 998 aa19.55■□□□□ 0.72
PSME3-203ENST00000541124 CUX2O14529 1486 aa19.54■□□□□ 0.72
PSME3-203ENST00000541124 ARHGAP35Q9NRY4 1499 aa19.54■□□□□ 0.72
PSME3-203ENST00000541124 ZNF326Q5BKZ1 582 aaKnown RBP19.53■□□□□ 0.72
PSME3-203ENST00000541124 PRXQ9BXM0 1461 aa19.52■□□□□ 0.72
PSME3-203ENST00000541124 MSH5O43196 834 aa19.52■□□□□ 0.71
PSME3-203ENST00000541124 FOXD1Q16676 465 aa19.5■□□□□ 0.71
PSME3-203ENST00000541124 CARMIL1Q5VZK9 1371 aa19.47■□□□□ 0.71
PSME3-203ENST00000541124 CUX1P39880 1505 aa19.46■□□□□ 0.71
PSME3-203ENST00000541124 MRS2Q9HD23 443 aa19.46■□□□□ 0.71
PSME3-203ENST00000541124 CCER2I3L3R5 266 aa19.45■□□□□ 0.7
PSME3-203ENST00000541124 MAPKBP1O60336 1514 aa19.45■□□□□ 0.7
PSME3-203ENST00000541124 FHOD3Q2V2M9 1422 aa19.45■□□□□ 0.7
PSME3-203ENST00000541124 CCDC184Q52MB2 194 aa19.43■□□□□ 0.7
PSME3-203ENST00000541124 MTUS2Q5JR59 1369 aa19.42■□□□□ 0.7
PSME3-203ENST00000541124 HSPA5P11021 654 aaKnown RBP19.41■□□□□ 0.7
PSME3-203ENST00000541124 ERICH3Q5RHP9 1530 aa19.4■□□□□ 0.7
PSME3-203ENST00000541124 SALL2Q9Y467 1007 aaPredicted RBP19.39■□□□□ 0.69
PSME3-203ENST00000541124 IGF1RP08069 1367 aa19.37■□□□□ 0.69
PSME3-203ENST00000541124 BIVM-ERCC5R4GMW8 1640 aa19.37■□□□□ 0.69
PSME3-203ENST00000541124 NPM2Q86SE8 214 aaKnown RBP19.35■□□□□ 0.69
PSME3-203ENST00000541124 LRRC9Q6ZRR7 1453 aa19.34■□□□□ 0.69
PSME3-203ENST00000541124 EIF4G2P78344 907 aaKnown RBP eCLIP19.33■□□□□ 0.68
PSME3-203ENST00000541124 NCAPD3P42695 1498 aa19.31■□□□□ 0.68
PSME3-203ENST00000541124 PPP4R2Q9NY27 417 aa19.28■□□□□ 0.68
PSME3-203ENST00000541124 WASHC2AQ641Q2 1341 aa19.27■□□□□ 0.68
PSME3-203ENST00000541124 CFTRP13569 1480 aa19.27■□□□□ 0.68
PSME3-203ENST00000541124 DEKP35659 375 aaKnown RBP19.26■□□□□ 0.67
PSME3-203ENST00000541124 TIAM1Q13009 1591 aa19.25■□□□□ 0.67
PSME3-203ENST00000541124 FHAD1B1AJZ9 1412 aa19.25■□□□□ 0.67
PSME3-203ENST00000541124 CCDC136Q96JN2 1154 aa19.25■□□□□ 0.67
PSME3-203ENST00000541124 TIMELESSQ9UNS1 1208 aa19.25■□□□□ 0.67
PSME3-203ENST00000541124 L3MBTL2Q969R5 705 aa19.22■□□□□ 0.67
PSME3-203ENST00000541124 CCDC18Q5T9S5 1454 aa19.22■□□□□ 0.67
PSME3-203ENST00000541124 RTL5Q5HYW3 569 aaPredicted RBP19.21■□□□□ 0.67
PSME3-203ENST00000541124 C11orf95C9JLR9 678 aaPredicted RBP19.19■□□□□ 0.66
PSME3-203ENST00000541124 HMGXB3Q12766 1538 aa19.19■□□□□ 0.66
PSME3-203ENST00000541124 ZNF777Q9ULD5 760 aaPredicted RBP19.18■□□□□ 0.66
PSME3-203ENST00000541124 RTN4Q9NQC3 1192 aaKnown RBP19.17■□□□□ 0.66
PSME3-203ENST00000541124 PAK3O75914 559 aaPredicted RBP19.16■□□□□ 0.66
PSME3-203ENST00000541124 FGD5Q6ZNL6 1462 aa19.16■□□□□ 0.66
PSME3-203ENST00000541124 ANP32AP39687 249 aaKnown RBP19.15■□□□□ 0.66
PSME3-203ENST00000541124 NOP58Q9Y2X3 529 aaKnown RBP19.15■□□□□ 0.66
PSME3-203ENST00000541124 RAD54L2Q9Y4B4 1467 aa19.15■□□□□ 0.66
PSME3-203ENST00000541124 PRKRIP1Q9H875 184 aaPredicted RBP19.15■□□□□ 0.66
PSME3-203ENST00000541124 FANCIQ9NVI1 1328 aa19.14■□□□□ 0.66
PSME3-203ENST00000541124 CADPSQ9ULU8 1353 aa19.14■□□□□ 0.65
PSME3-203ENST00000541124 SLC4A1APQ9BWU0 796 aaKnown RBP19.14■□□□□ 0.65
PSME3-203ENST00000541124 FGD6Q6ZV73 1430 aa19.12■□□□□ 0.65
PSME3-203ENST00000541124 PCF11O94913 1555 aaKnown RBP19.11■□□□□ 0.65
PSME3-203ENST00000541124 TDRD9Q8NDG6 1382 aaKnown RBP19.11■□□□□ 0.65
PSME3-203ENST00000541124 MPHOSPH9Q99550 1183 aa19.11■□□□□ 0.65
PSME3-203ENST00000541124 KDM2AQ9Y2K7 1162 aa19.11■□□□□ 0.65
PSME3-203ENST00000541124 PTPRKQ15262 1439 aa19.1■□□□□ 0.65
PSME3-203ENST00000541124 LAS1LQ9Y4W2 734 aaKnown RBP19.09■□□□□ 0.65
PSME3-203ENST00000541124 TMC1Q8TDI8 760 aa19.08■□□□□ 0.65
PSME3-203ENST00000541124 ZBTB47Q9UFB7 747 aaPredicted RBP19.08■□□□□ 0.65
PSME3-203ENST00000541124 AQRO60306 1485 aaKnown RBP eCLIP19.08■□□□□ 0.654e-7■■■■□ 21.8
PSME3-203ENST00000541124 UACAQ9BZF9 1416 aa19.05■□□□□ 0.64
PSME3-203ENST00000541124 AKNAQ7Z591 1439 aa19.05■□□□□ 0.64
PSME3-203ENST00000541124 NBPF8Q3BBV2 869 aa19.04■□□□□ 0.64
PSME3-203ENST00000541124 FMN1Q68DA7 1419 aa19.03■□□□□ 0.64
PSME3-203ENST00000541124 KIF7Q2M1P5 1343 aa18.99■□□□□ 0.63
PSME3-203ENST00000541124 NAIPQ13075 1403 aa18.99■□□□□ 0.63
PSME3-203ENST00000541124 ZNF644Q9H582 1327 aaPredicted RBP18.98■□□□□ 0.63
PSME3-203ENST00000541124 FANCD2Q9BXW9 1451 aa18.98■□□□□ 0.63
PSME3-203ENST00000541124 CCDC7Q96M83 1385 aa18.97■□□□□ 0.63
PSME3-203ENST00000541124 ZBED9Q6R2W3 1325 aa18.97■□□□□ 0.63
PSME3-203ENST00000541124 CNTLNQ9NXG0 1405 aa18.95■□□□□ 0.62
PSME3-203ENST00000541124 NCOA2Q15596 1464 aa18.95■□□□□ 0.62
PSME3-203ENST00000541124 HFM1A2PYH4 1435 aa18.95■□□□□ 0.62
PSME3-203ENST00000541124 CASKIN1Q8WXD9 1431 aa18.94■□□□□ 0.62
PSME3-203ENST00000541124 SKAP1Q86WV1 359 aa18.93■□□□□ 0.62
PSME3-203ENST00000541124 NESP48681 1621 aa18.93■□□□□ 0.62
PSME3-203ENST00000541124 MYOM3Q5VTT5 1437 aa18.91■□□□□ 0.62
PSME3-203ENST00000541124 FBLN2P98095 1184 aa18.91■□□□□ 0.62
PSME3-203ENST00000541124 MAP3K1Q13233 1512 aa18.91■□□□□ 0.62
PSME3-203ENST00000541124 NUDCQ9Y266 331 aa18.9■□□□□ 0.62
PSME3-203ENST00000541124 FYCO1Q9BQS8 1478 aa18.89■□□□□ 0.62
PSME3-203ENST00000541124 IPO9Q96P70 1041 aaKnown RBP18.88■□□□□ 0.61
PSME3-203ENST00000541124 NEFMP07197 916 aa18.88■□□□□ 0.61
PSME3-203ENST00000541124 ERICH6BQ5W0A0 696 aa18.87■□□□□ 0.61
PSME3-203ENST00000541124 EXOC6Q8TAG9 804 aa18.87■□□□□ 0.61
PSME3-203ENST00000541124 CARD11Q9BXL7 1154 aa18.87■□□□□ 0.61
PSME3-203ENST00000541124 PLIN1O60240 522 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms