RNA–Protein interactions for RNA: ENST00000540809.1

PHC1-209, Transcript of polyhomeotic homolog 1, humanhuman

TSL 2

Gene PHC1, Length 793 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-209ENST00000540809 ATAD2BQ9ULI0 1458 aa14.82□□□□□ -0.04
PHC1-209ENST00000540809 MNX1P50219 401 aaPredicted RBP14.79□□□□□ -0.04
PHC1-209ENST00000540809 SMARCA4P51532 1647 aa14.77□□□□□ -0.05
PHC1-209ENST00000540809 SMARCA2P51531 1590 aa14.72□□□□□ -0.05
PHC1-209ENST00000540809 ZNF579Q8NAF0 562 aaKnown RBP14.71□□□□□ -0.05
PHC1-209ENST00000540809 NESP48681 1621 aa14.7□□□□□ -0.06
PHC1-209ENST00000540809 ERCC6Q03468 1493 aa14.69□□□□□ -0.06
PHC1-209ENST00000540809 POTEIP0CG38 1075 aa14.69□□□□□ -0.06
PHC1-209ENST00000540809 HMGXB3Q12766 1538 aa14.69□□□□□ -0.06
PHC1-209ENST00000540809 ZRANB1Q9UGI0 708 aa14.67□□□□□ -0.06
PHC1-209ENST00000540809 CUX2O14529 1486 aa14.67□□□□□ -0.06
PHC1-209ENST00000540809 BAZ1AQ9NRL2 1556 aaPredicted RBP14.66□□□□□ -0.06
PHC1-209ENST00000540809 CLCN6P51797 869 aa14.65□□□□□ -0.06
PHC1-209ENST00000540809 MROH2BQ7Z745 1585 aa14.64□□□□□ -0.07
PHC1-209ENST00000540809 BAZ1BQ9UIG0 1483 aaKnown RBP14.63□□□□□ -0.07
PHC1-209ENST00000540809 PEG3Q9GZU2 1588 aa14.61□□□□□ -0.07
PHC1-209ENST00000540809 NPM1P06748 294 aaKnown RBP eCLIP14.57□□□□□ -0.08
PHC1-209ENST00000540809 GALR2O43603 387 aaPredicted RBP14.52□□□□□ -0.09
PHC1-209ENST00000540809 PHF12Q96QT6 1004 aa14.52□□□□□ -0.09
PHC1-209ENST00000540809 LAMC3Q9Y6N6 1575 aa14.48□□□□□ -0.09
PHC1-209ENST00000540809 THOC2Q8NI27 1593 aaKnown RBP14.47□□□□□ -0.09
PHC1-209ENST00000540809 LHX8Q68G74 356 aa14.47□□□□□ -0.09
PHC1-209ENST00000540809 PAK3O75914 559 aaPredicted RBP14.46□□□□□ -0.09
PHC1-209ENST00000540809 WIZO95785 1651 aa14.45□□□□□ -0.1
PHC1-209ENST00000540809 FKBP8Q14318 412 aa14.44□□□□□ -0.1
PHC1-209ENST00000540809 KIF21AQ7Z4S6 1674 aa14.44□□□□□ -0.1
PHC1-209ENST00000540809 PDS5BQ9NTI5 1447 aa14.43□□□□□ -0.1
PHC1-209ENST00000540809 DCBLD2Q96PD2 775 aa14.43□□□□□ -0.1
PHC1-209ENST00000540809 CADPSQ9ULU8 1353 aa14.43□□□□□ -0.1
PHC1-209ENST00000540809 MIER1Q8N108 512 aa14.39□□□□□ -0.11
PHC1-209ENST00000540809 CCDC61Q9Y6R9 512 aa14.37□□□□□ -0.11
PHC1-209ENST00000540809 TSPYL2Q9H2G4 693 aaPredicted RBP14.34□□□□□ -0.11
PHC1-209ENST00000540809 MS4A3Q96HJ5 214 aa14.33□□□□□ -0.12
PHC1-209ENST00000540809 RSF1Q96T23 1441 aaPredicted RBP14.32□□□□□ -0.12
PHC1-209ENST00000540809 RASEFQ8IZ41 740 aa14.32□□□□□ -0.12
PHC1-209ENST00000540809 PELP1Q8IZL8 1130 aaKnown RBP14.3□□□□□ -0.12
PHC1-209ENST00000540809 MRC2Q9UBG0 1479 aa14.3□□□□□ -0.12
PHC1-209ENST00000540809 WDR62O43379 1518 aa14.26□□□□□ -0.13
PHC1-209ENST00000540809 PLEKHG5O94827 1062 aa14.26□□□□□ -0.13
PHC1-209ENST00000540809 PLCD3Q8N3E9 789 aa14.26□□□□□ -0.13
PHC1-209ENST00000540809 KIF12Q96FN5 646 aa14.26□□□□□ -0.13
PHC1-209ENST00000540809 CFTRP13569 1480 aa14.25□□□□□ -0.13
PHC1-209ENST00000540809 FANCD2Q9BXW9 1451 aa14.25□□□□□ -0.13
PHC1-209ENST00000540809 ASTLQ6HA08 431 aaPredicted RBP14.24□□□□□ -0.13
PHC1-209ENST00000540809 NUBP1P53384 320 aa14.23□□□□□ -0.13
PHC1-209ENST00000540809 CEP164Q9UPV0 1460 aa14.23□□□□□ -0.13
PHC1-209ENST00000540809 POTEB2H3BUK9 544 aa14.21□□□□□ -0.13
PHC1-209ENST00000540809 ATMINO43313 823 aaPredicted RBP14.21□□□□□ -0.13
PHC1-209ENST00000540809 TOP2AP11388 1531 aaKnown RBP14.2□□□□□ -0.14
PHC1-209ENST00000540809 MAP3K13O43283 966 aa14.16□□□□□ -0.14
PHC1-209ENST00000540809 TRIM41Q8WV44 630 aa14.16□□□□□ -0.14
PHC1-209ENST00000540809 TRPC6Q9Y210 931 aa14.16□□□□□ -0.14
PHC1-209ENST00000540809 URB2Q14146 1524 aaKnown RBP14.15□□□□□ -0.14
PHC1-209ENST00000540809 ZBTB47Q9UFB7 747 aaPredicted RBP14.13□□□□□ -0.15
PHC1-209ENST00000540809 CCDC88BA6NC98 1476 aa14.12□□□□□ -0.15
PHC1-209ENST00000540809 ATN1P54259 1190 aaPredicted RBP14.1□□□□□ -0.15
PHC1-209ENST00000540809 OTUD5Q96G74 571 aa14.1□□□□□ -0.15
PHC1-209ENST00000540809 BMP2KQ9NSY1 1161 aaPredicted RBP14.08□□□□□ -0.16
PHC1-209ENST00000540809 FBXO3Q9UK99 471 aa14.08□□□□□ -0.16
PHC1-209ENST00000540809 METRNQ9UJH8 293 aa14.07□□□□□ -0.16
PHC1-209ENST00000540809 SLC39A7Q92504 469 aa14.06□□□□□ -0.16
PHC1-209ENST00000540809 POTEJP0CG39 1038 aa14.05□□□□□ -0.16
PHC1-209ENST00000540809 C7P10643 843 aa14.05□□□□□ -0.16
PHC1-209ENST00000540809 TIE1P35590 1138 aa14.03□□□□□ -0.16
PHC1-209ENST00000540809 SGIP1Q9BQI5 828 aa14.03□□□□□ -0.16
PHC1-209ENST00000540809 ZNF608Q9ULD9 1512 aaPredicted RBP14.01□□□□□ -0.17
PHC1-209ENST00000540809 POTEFA5A3E0 1075 aa14.01□□□□□ -0.17
PHC1-209ENST00000540809 PRDM2Q13029 1718 aa14□□□□□ -0.17
PHC1-209ENST00000540809 FAM212AQ96EL1 285 aa13.99□□□□□ -0.17
PHC1-209ENST00000540809 VASPP50552 380 aaPredicted RBP13.98□□□□□ -0.17
PHC1-209ENST00000540809 TOPBP1Q92547 1522 aa13.97□□□□□ -0.17
PHC1-209ENST00000540809 TTLL13PA6NNM8 815 aa13.97□□□□□ -0.17
PHC1-209ENST00000540809 IFNL1Q8IU54 200 aa13.97□□□□□ -0.17
PHC1-209ENST00000540809 PCDHB13Q9Y5F0 798 aa13.97□□□□□ -0.17
PHC1-209ENST00000540809 IFT140Q96RY7 1462 aa13.95□□□□□ -0.18
PHC1-209ENST00000540809 ABCC8Q09428 1581 aa13.89□□□□□ -0.19
PHC1-209ENST00000540809 AQRO60306 1485 aaKnown RBP eCLIP13.89□□□□□ -0.19
PHC1-209ENST00000540809 DNMBPQ6XZF7 1577 aa13.88□□□□□ -0.19
PHC1-209ENST00000540809 DCAF8Q5TAQ9 597 aa13.88□□□□□ -0.19
PHC1-209ENST00000540809 COLQQ9Y215 455 aaPredicted RBP13.88□□□□□ -0.19
PHC1-209ENST00000540809 RIMBP3CA6NJZ7 1639 aa13.86□□□□□ -0.19
PHC1-209ENST00000540809 RIMBP3BA6NNM3 1639 aa13.86□□□□□ -0.19
PHC1-209ENST00000540809 TARBP1Q13395 1621 aaKnown RBP13.86□□□□□ -0.19
PHC1-209ENST00000540809 RIMBP3Q9UFD9 1639 aa13.86□□□□□ -0.19
PHC1-209ENST00000540809 TRIM35Q9UPQ4 493 aa13.85□□□□□ -0.19
PHC1-209ENST00000540809 EIF4G3O43432 1585 aaKnown RBP13.84□□□□□ -0.19
PHC1-209ENST00000540809 PYGBP11216 843 aa13.84□□□□□ -0.19
PHC1-209ENST00000540809 POLA1P09884 1462 aaPredicted RBP13.83□□□□□ -0.2
PHC1-209ENST00000540809 RAD54L2Q9Y4B4 1467 aa13.83□□□□□ -0.2
PHC1-209ENST00000540809 IER5LQ5T953 404 aa13.81□□□□□ -0.2
PHC1-209ENST00000540809 KLHL34Q8N239 644 aa13.81□□□□□ -0.2
PHC1-209ENST00000540809 TDRD9Q8NDG6 1382 aaKnown RBP13.81□□□□□ -0.2
PHC1-209ENST00000540809 ARHGEF11O15085 1522 aa13.8□□□□□ -0.2
PHC1-209ENST00000540809 CYB5RLQ6IPT4 315 aa13.8□□□□□ -0.2
PHC1-209ENST00000540809 IFNLR1Q8IU57 520 aaPredicted RBP13.8□□□□□ -0.2
PHC1-209ENST00000540809 TMEM106CQ9BVX2 250 aa13.8□□□□□ -0.2
PHC1-209ENST00000540809 SOGA1O94964 1423 aa13.8□□□□□ -0.2
PHC1-209ENST00000540809 MAMSTRQ6ZN01 415 aa13.79□□□□□ -0.2
PHC1-209ENST00000540809 PCDHB8Q9UN66 801 aa13.77□□□□□ -0.21
PHC1-209ENST00000540809 CHD1O14646 1710 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms