RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 GRIN2AQ12879 1464 aa16.36■□□□□ 0.21
TRAPPC1-202ENST00000540486 NUP160Q12769 1436 aa16.36■□□□□ 0.21
TRAPPC1-202ENST00000540486 CUX1P39880 1505 aa16.34■□□□□ 0.21
TRAPPC1-202ENST00000540486 PBRM1Q86U86 1689 aa16.34■□□□□ 0.21
TRAPPC1-202ENST00000540486 KDM6BO15054 1643 aa16.32■□□□□ 0.2
TRAPPC1-202ENST00000540486 SHROOM2Q13796 1616 aa16.3■□□□□ 0.2
TRAPPC1-202ENST00000540486 ABCA10Q8WWZ4 1543 aa16.29■□□□□ 0.2
TRAPPC1-202ENST00000540486 MAPKBP1O60336 1514 aa16.29■□□□□ 0.2
TRAPPC1-202ENST00000540486 PRG4Q92954 1404 aaPredicted RBP16.27■□□□□ 0.19
TRAPPC1-202ENST00000540486 FBXO41Q8TF61 875 aa16.26■□□□□ 0.19
TRAPPC1-202ENST00000540486 JPH4Q96JJ6 628 aa16.26■□□□□ 0.19
TRAPPC1-202ENST00000540486 ABCA5Q8WWZ7 1642 aa16.26■□□□□ 0.19
TRAPPC1-202ENST00000540486 DIP2BQ9P265 1576 aa16.25■□□□□ 0.19
TRAPPC1-202ENST00000540486 FHAD1B1AJZ9 1412 aa16.21■□□□□ 0.19
TRAPPC1-202ENST00000540486 ADGRL1O94910 1474 aa16.2■□□□□ 0.18
TRAPPC1-202ENST00000540486 ADAMTS12P58397 1594 aa16.19■□□□□ 0.18
TRAPPC1-202ENST00000540486 HECW2Q9P2P5 1572 aa16.19■□□□□ 0.18
TRAPPC1-202ENST00000540486 MAPK8IP2Q13387 824 aaPredicted RBP16.17■□□□□ 0.18
TRAPPC1-202ENST00000540486 WRNQ14191 1432 aaPredicted RBP eCLIP16.11■□□□□ 0.17
TRAPPC1-202ENST00000540486 TSPOAP1O95153 1857 aa16.11■□□□□ 0.17
TRAPPC1-202ENST00000540486 ADCY10Q96PN6 1610 aa16.09■□□□□ 0.17
TRAPPC1-202ENST00000540486 ERICH3Q5RHP9 1530 aa16.08■□□□□ 0.16
TRAPPC1-202ENST00000540486 NCBP3Q53F19 620 aaKnown RBP16.04■□□□□ 0.16
TRAPPC1-202ENST00000540486 KCNA4P22459 653 aa16.03■□□□□ 0.16
TRAPPC1-202ENST00000540486 CNKSR2Q8WXI2 1034 aa16.03■□□□□ 0.16
TRAPPC1-202ENST00000540486 DMRT2Q9Y5R5 561 aa16.02■□□□□ 0.16
TRAPPC1-202ENST00000540486 LMTK3Q96Q04 1460 aa15.99■□□□□ 0.15
TRAPPC1-202ENST00000540486 PLB1Q6P1J6 1458 aa15.98■□□□□ 0.15
TRAPPC1-202ENST00000540486 COL17A1Q9UMD9 1497 aaPredicted RBP15.98■□□□□ 0.15
TRAPPC1-202ENST00000540486 GLI2P10070 1586 aa15.98■□□□□ 0.15
TRAPPC1-202ENST00000540486 RUSC2Q8N2Y8 1516 aa15.97■□□□□ 0.15
TRAPPC1-202ENST00000540486 PTPRGP23470 1445 aa15.94■□□□□ 0.14
TRAPPC1-202ENST00000540486 ASXL2Q76L83 1435 aa15.94■□□□□ 0.14
TRAPPC1-202ENST00000540486 TOP2BQ02880 1626 aa15.94■□□□□ 0.14
TRAPPC1-202ENST00000540486 PPRC1Q5VV67 1664 aaKnown RBP15.93■□□□□ 0.14
TRAPPC1-202ENST00000540486 ABCC2Q92887 1545 aa15.93■□□□□ 0.14
TRAPPC1-202ENST00000540486 KIAA0586Q9BVV6 1533 aa15.93■□□□□ 0.14
TRAPPC1-202ENST00000540486 TEX14Q8IWB6 1497 aa15.91■□□□□ 0.14
TRAPPC1-202ENST00000540486 SOCS7O14512 581 aa15.91■□□□□ 0.14
TRAPPC1-202ENST00000540486 BIVM-ERCC5R4GMW8 1640 aa15.85■□□□□ 0.13
TRAPPC1-202ENST00000540486 TNIKQ9UKE5 1360 aa15.85■□□□□ 0.13
TRAPPC1-202ENST00000540486 EPRSP07814 1512 aaKnown RBP15.84■□□□□ 0.13
TRAPPC1-202ENST00000540486 TTBK1Q5TCY1 1321 aaPredicted RBP15.83■□□□□ 0.12
TRAPPC1-202ENST00000540486 UHRF1BP1LA0JNW5 1464 aa15.83■□□□□ 0.12
TRAPPC1-202ENST00000540486 CARMIL2Q6F5E8 1435 aa15.82■□□□□ 0.12
TRAPPC1-202ENST00000540486 ILDR2Q71H61 639 aa15.81■□□□□ 0.12
TRAPPC1-202ENST00000540486 MAP3K4Q9Y6R4 1608 aa15.81■□□□□ 0.12
TRAPPC1-202ENST00000540486 NPM3O75607 178 aaKnown RBP15.79■□□□□ 0.12
TRAPPC1-202ENST00000540486 UACAQ9BZF9 1416 aa15.78■□□□□ 0.12
TRAPPC1-202ENST00000540486 DISP3Q9P2K9 1392 aa15.76■□□□□ 0.11
TRAPPC1-202ENST00000540486 SUPT5HO00267 1087 aaKnown RBP15.75■□□□□ 0.11
TRAPPC1-202ENST00000540486 RNF216Q9NWF9 866 aaPredicted RBP15.75■□□□□ 0.11
TRAPPC1-202ENST00000540486 IGF1RP08069 1367 aa15.75■□□□□ 0.11
TRAPPC1-202ENST00000540486 KDM5BQ9UGL1 1544 aa15.74■□□□□ 0.11
TRAPPC1-202ENST00000540486 CUL7Q14999 1698 aa15.73■□□□□ 0.11
TRAPPC1-202ENST00000540486 PTPRMP28827 1452 aa15.72■□□□□ 0.11
TRAPPC1-202ENST00000540486 HOXD11P31277 338 aaPredicted RBP15.71■□□□□ 0.11
TRAPPC1-202ENST00000540486 CERKQ8TCT0 537 aa15.71■□□□□ 0.11
TRAPPC1-202ENST00000540486 MAGI3Q5TCQ9 1506 aa15.69■□□□□ 0.1
TRAPPC1-202ENST00000540486 CD109Q6YHK3 1445 aa15.68■□□□□ 0.1
TRAPPC1-202ENST00000540486 POTEDQ86YR6 584 aa15.67■□□□□ 0.1
TRAPPC1-202ENST00000540486 PCF11O94913 1555 aaKnown RBP15.66■□□□□ 0.1
TRAPPC1-202ENST00000540486 WDR7Q9Y4E6 1490 aa15.65■□□□□ 0.1
TRAPPC1-202ENST00000540486 KIF21BO75037 1637 aa15.64■□□□□ 0.09
TRAPPC1-202ENST00000540486 KIF27Q86VH2 1401 aa15.63■□□□□ 0.09
TRAPPC1-202ENST00000540486 ADAMTSL3P82987 1691 aa15.62■□□□□ 0.09
TRAPPC1-202ENST00000540486 CARMIL1Q5VZK9 1371 aa15.62■□□□□ 0.09
TRAPPC1-202ENST00000540486 ZCCHC11Q5TAX3 1644 aaKnown RBP15.61■□□□□ 0.09
TRAPPC1-202ENST00000540486 DISP1Q96F81 1524 aa15.6■□□□□ 0.09
TRAPPC1-202ENST00000540486 KCNH8Q96L42 1107 aa15.6■□□□□ 0.09
TRAPPC1-202ENST00000540486 ARAP3Q8WWN8 1544 aa15.59■□□□□ 0.09
TRAPPC1-202ENST00000540486 IQGAP2Q13576 1575 aa15.59■□□□□ 0.09
TRAPPC1-202ENST00000540486 CFAP43Q8NDM7 1665 aa15.57■□□□□ 0.08
TRAPPC1-202ENST00000540486 PHLDB1Q86UU1 1377 aa15.57■□□□□ 0.08
TRAPPC1-202ENST00000540486 HSPA2P54652 639 aa15.56■□□□□ 0.08
TRAPPC1-202ENST00000540486 ARID4BQ4LE39 1312 aaPredicted RBP15.54■□□□□ 0.08
TRAPPC1-202ENST00000540486 UGGT2Q9NYU1 1516 aa15.5■□□□□ 0.07
TRAPPC1-202ENST00000540486 BCORL1Q5H9F3 1711 aa15.48■□□□□ 0.07
TRAPPC1-202ENST00000540486 RAPGEF3O95398 923 aa15.48■□□□□ 0.07
TRAPPC1-202ENST00000540486 SPATA31D1Q6ZQQ2 1576 aa15.48■□□□□ 0.07
TRAPPC1-202ENST00000540486 MADDQ8WXG6 1647 aa15.47■□□□□ 0.07
TRAPPC1-202ENST00000540486 KIAA0556O60303 1618 aa15.44■□□□□ 0.06
TRAPPC1-202ENST00000540486 NEO1Q92859 1461 aa15.4■□□□□ 0.06
TRAPPC1-202ENST00000540486 POGZQ7Z3K3 1410 aa15.39■□□□□ 0.05
TRAPPC1-202ENST00000540486 RIMS1Q86UR5 1692 aaKnown RBP15.38■□□□□ 0.05
TRAPPC1-202ENST00000540486 YEATS2Q9ULM3 1422 aa15.38■□□□□ 0.05
TRAPPC1-202ENST00000540486 ABCA8O94911 1581 aa15.37■□□□□ 0.05
TRAPPC1-202ENST00000540486 FAM9AQ8IZU1 332 aaPredicted RBP15.37■□□□□ 0.05
TRAPPC1-202ENST00000540486 GOLGA3Q08378 1498 aa15.35■□□□□ 0.05
TRAPPC1-202ENST00000540486 RAPGEF2Q9Y4G8 1499 aa15.35■□□□□ 0.05
TRAPPC1-202ENST00000540486 ABCA9Q8IUA7 1624 aa15.32■□□□□ 0.04
TRAPPC1-202ENST00000540486 FANCAO15360 1455 aa15.32■□□□□ 0.04
TRAPPC1-202ENST00000540486 FRMPD1Q5SYB0 1578 aa15.3■□□□□ 0.04
TRAPPC1-202ENST00000540486 AKNAQ7Z591 1439 aa15.3■□□□□ 0.04
TRAPPC1-202ENST00000540486 ARHGEF40Q8TER5 1519 aa15.29■□□□□ 0.04
TRAPPC1-202ENST00000540486 ATP10BO94823 1461 aa15.29■□□□□ 0.04
TRAPPC1-202ENST00000540486 DENND4BO75064 1496 aaPredicted RBP15.27■□□□□ 0.04
TRAPPC1-202ENST00000540486 IQSEC2Q5JU85 1478 aa15.27■□□□□ 0.04
TRAPPC1-202ENST00000540486 FHOD3Q2V2M9 1422 aa15.27■□□□□ 0.04
TRAPPC1-202ENST00000540486 PTPRTO14522 1441 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms