RNA–Protein interactions for RNA: ENST00000540430.5

LDHA-218, Transcript of lactate dehydrogenase A, humanhuman

TSL 2 BASIC

Gene LDHA, Length 2,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-218ENST00000540430 ERICH3Q5RHP9 1530 aa14.68□□□□□ -0.06
LDHA-218ENST00000540430 NUP160Q12769 1436 aa14.67□□□□□ -0.06
LDHA-218ENST00000540430 CEP170Q5SW79 1584 aa14.65□□□□□ -0.06
LDHA-218ENST00000540430 SHROOM2Q13796 1616 aa14.61□□□□□ -0.07
LDHA-218ENST00000540430 ERCC6L2Q5T890 1561 aa14.61□□□□□ -0.07
LDHA-218ENST00000540430 LOC105371045A0A1W2PR82 267 aa14.58□□□□□ -0.08
LDHA-218ENST00000540430 PRG4Q92954 1404 aaPredicted RBP14.52□□□□□ -0.09
LDHA-218ENST00000540430 JPH4Q96JJ6 628 aa14.52□□□□□ -0.09
LDHA-218ENST00000540430 RUSC2Q8N2Y8 1516 aa14.5□□□□□ -0.09
LDHA-218ENST00000540430 KIF27Q86VH2 1401 aa14.49□□□□□ -0.09
LDHA-218ENST00000540430 IGF1RP08069 1367 aa14.48□□□□□ -0.09
LDHA-218ENST00000540430 ACIN1Q9UKV3 1341 aaKnown RBP14.48□□□□□ -0.09
LDHA-218ENST00000540430 CUL7Q14999 1698 aa14.46□□□□□ -0.09
LDHA-218ENST00000540430 TTBK1Q5TCY1 1321 aaPredicted RBP14.45□□□□□ -0.1
LDHA-218ENST00000540430 KIAA0586Q9BVV6 1533 aa14.44□□□□□ -0.1
LDHA-218ENST00000540430 CARMIL1Q5VZK9 1371 aa14.38□□□□□ -0.11
LDHA-218ENST00000540430 KIF13AQ9H1H9 1805 aa14.38□□□□□ -0.11
LDHA-218ENST00000540430 NPM1P06748 294 aaKnown RBP eCLIP14.36□□□□□ -0.11
LDHA-218ENST00000540430 MAPKBP1O60336 1514 aa14.35□□□□□ -0.11
LDHA-218ENST00000540430 ADCY10Q96PN6 1610 aa14.35□□□□□ -0.11
LDHA-218ENST00000540430 NEUROD1Q13562 356 aa14.34□□□□□ -0.11
LDHA-218ENST00000540430 CENPBP07199 599 aaPredicted RBP14.33□□□□□ -0.11
LDHA-218ENST00000540430 ABCC10Q5T3U5 1492 aa14.33□□□□□ -0.12
LDHA-218ENST00000540430 FAM69CQ0P6D2 419 aa14.3□□□□□ -0.12
LDHA-218ENST00000540430 PTPRGP23470 1445 aa14.3□□□□□ -0.12
LDHA-218ENST00000540430 CARMIL2Q6F5E8 1435 aa14.3□□□□□ -0.12
LDHA-218ENST00000540430 IQGAP2Q13576 1575 aa14.29□□□□□ -0.12
LDHA-218ENST00000540430 DIP2BQ9P265 1576 aa14.29□□□□□ -0.12
LDHA-218ENST00000540430 AEBP2Q6ZN18 517 aaPredicted RBP14.28□□□□□ -0.12
LDHA-218ENST00000540430 GTF3C3Q9Y5Q9 886 aa14.28□□□□□ -0.12
LDHA-218ENST00000540430 TNIKQ9UKE5 1360 aa14.28□□□□□ -0.12
LDHA-218ENST00000540430 RAPGEF2Q9Y4G8 1499 aa14.26□□□□□ -0.13
LDHA-218ENST00000540430 ABCC2Q92887 1545 aa14.23□□□□□ -0.13
LDHA-218ENST00000540430 DISP1Q96F81 1524 aa14.22□□□□□ -0.13
LDHA-218ENST00000540430 UHRF1BP1LA0JNW5 1464 aa14.21□□□□□ -0.13
LDHA-218ENST00000540430 UGGT2Q9NYU1 1516 aa14.21□□□□□ -0.13
LDHA-218ENST00000540430 UACAQ9BZF9 1416 aa14.19□□□□□ -0.14
LDHA-218ENST00000540430 PLB1Q6P1J6 1458 aa14.18□□□□□ -0.14
LDHA-218ENST00000540430 TSPOAP1O95153 1857 aa14.17□□□□□ -0.14
LDHA-218ENST00000540430 ASXL2Q76L83 1435 aa14.17□□□□□ -0.14
LDHA-218ENST00000540430 KIAA0556O60303 1618 aa14.16□□□□□ -0.14
LDHA-218ENST00000540430 KDM6BO15054 1643 aa14.16□□□□□ -0.14
LDHA-218ENST00000540430 DIEXFQ68CQ4 756 aaKnown RBP14.16□□□□□ -0.14
LDHA-218ENST00000540430 KDM5BQ9UGL1 1544 aa14.14□□□□□ -0.15
LDHA-218ENST00000540430 GLI2P10070 1586 aa14.14□□□□□ -0.15
LDHA-218ENST00000540430 CTTNBP2Q8WZ74 1663 aa14.14□□□□□ -0.15
LDHA-218ENST00000540430 PRXQ9BXM0 1461 aa14.12□□□□□ -0.15
LDHA-218ENST00000540430 GOLGA3Q08378 1498 aa14.11□□□□□ -0.15
LDHA-218ENST00000540430 ZCCHC11Q5TAX3 1644 aaKnown RBP14.1□□□□□ -0.15
LDHA-218ENST00000540430 PPRC1Q5VV67 1664 aaKnown RBP14.09□□□□□ -0.15
LDHA-218ENST00000540430 EPRSP07814 1512 aaKnown RBP14.08□□□□□ -0.15
LDHA-218ENST00000540430 CCER1Q8TC90 406 aaPredicted RBP14.07□□□□□ -0.16
LDHA-218ENST00000540430 MAP3K4Q9Y6R4 1608 aa14.06□□□□□ -0.16
LDHA-218ENST00000540430 WDR7Q9Y4E6 1490 aa14.04□□□□□ -0.16
LDHA-218ENST00000540430 ABCA8O94911 1581 aa14.03□□□□□ -0.16
LDHA-218ENST00000540430 TEX14Q8IWB6 1497 aa14.03□□□□□ -0.16
LDHA-218ENST00000540430 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.01□□□□□ -0.17
LDHA-218ENST00000540430 KDM4FA0A1W2PPD8 638 aa14□□□□□ -0.17
LDHA-218ENST00000540430 CSRNP3Q8WYN3 585 aa13.99□□□□□ -0.17
LDHA-218ENST00000540430 BCL11AQ9H165 835 aa13.99□□□□□ -0.17
LDHA-218ENST00000540430 FAM9AQ8IZU1 332 aaPredicted RBP13.98□□□□□ -0.17
LDHA-218ENST00000540430 COL17A1Q9UMD9 1497 aaPredicted RBP13.98□□□□□ -0.17
LDHA-218ENST00000540430 EEA1Q15075 1411 aa13.96□□□□□ -0.17
LDHA-218ENST00000540430 CFAP43Q8NDM7 1665 aa13.96□□□□□ -0.17
LDHA-218ENST00000540430 MAGI3Q5TCQ9 1506 aa13.95□□□□□ -0.18
LDHA-218ENST00000540430 CD109Q6YHK3 1445 aa13.95□□□□□ -0.18
LDHA-218ENST00000540430 SAMD9Q5K651 1589 aa13.94□□□□□ -0.18
LDHA-218ENST00000540430 KCNH8Q96L42 1107 aa13.94□□□□□ -0.18
LDHA-218ENST00000540430 P3H3Q8IVL6 736 aa13.93□□□□□ -0.18
LDHA-218ENST00000540430 ATP10BO94823 1461 aa13.91□□□□□ -0.18
LDHA-218ENST00000540430 ZNF316A6NFI3 1004 aaPredicted RBP13.91□□□□□ -0.18
LDHA-218ENST00000540430 ADGRL1O94910 1474 aa13.9□□□□□ -0.18
LDHA-218ENST00000540430 RAPGEF6Q8TEU7 1601 aa13.88□□□□□ -0.19
LDHA-218ENST00000540430 CLSPNQ9HAW4 1339 aa13.88□□□□□ -0.19
LDHA-218ENST00000540430 ARID3CA6NKF2 412 aa13.88□□□□□ -0.19
LDHA-218ENST00000540430 ABCA9Q8IUA7 1624 aa13.85□□□□□ -0.19
LDHA-218ENST00000540430 ARAP3Q8WWN8 1544 aa13.85□□□□□ -0.19
LDHA-218ENST00000540430 KIF21BO75037 1637 aa13.84□□□□□ -0.19
LDHA-218ENST00000540430 NUP153P49790 1475 aaKnown RBP13.83□□□□□ -0.2
LDHA-218ENST00000540430 FHOD3Q2V2M9 1422 aa13.83□□□□□ -0.2
LDHA-218ENST00000540430 PHLDB1Q86UU1 1377 aa13.83□□□□□ -0.2
LDHA-218ENST00000540430 RANGAP1P46060 587 aaPredicted RBP13.82□□□□□ -0.2
LDHA-218ENST00000540430 EFCAB5A4FU69 1503 aa13.81□□□□□ -0.2
LDHA-218ENST00000540430 HNRNPUL2Q1KMD3 747 aaKnown RBP13.81□□□□□ -0.2
LDHA-218ENST00000540430 NEO1Q92859 1461 aa13.79□□□□□ -0.2
LDHA-218ENST00000540430 PRKCSHP14314 528 aaPredicted RBP13.79□□□□□ -0.2
LDHA-218ENST00000540430 PLEKHD1A6NEE1 506 aa13.76□□□□□ -0.21
LDHA-218ENST00000540430 YTHDC1Q96MU7 727 aaKnown RBP13.75□□□□□ -0.21
LDHA-218ENST00000540430 ANP32EQ9BTT0 268 aa13.74□□□□□ -0.21
LDHA-218ENST00000540430 RAPGEF3O95398 923 aa13.73□□□□□ -0.21
LDHA-218ENST00000540430 MIER1Q8N108 512 aa13.73□□□□□ -0.21
LDHA-218ENST00000540430 UBTFP17480 764 aaKnown RBP13.72□□□□□ -0.21
LDHA-218ENST00000540430 HECW2Q9P2P5 1572 aa13.71□□□□□ -0.21
LDHA-218ENST00000540430 FRMPD1Q5SYB0 1578 aa13.71□□□□□ -0.21
LDHA-218ENST00000540430 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.7□□□□□ -0.229e-20■□□□□ 9.6
LDHA-218ENST00000540430 EHMT2Q96KQ7 1210 aa13.7□□□□□ -0.22
LDHA-218ENST00000540430 CFAP74Q9C0B2 1584 aa13.7□□□□□ -0.22
LDHA-218ENST00000540430 FMN1Q68DA7 1419 aa13.69□□□□□ -0.22
LDHA-218ENST00000540430 FANCAO15360 1455 aa13.69□□□□□ -0.22
LDHA-218ENST00000540430 CDK13Q14004 1512 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms