RNA–Protein interactions for RNA: ENST00000540415.1

LRP6-204, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 473 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-204ENST00000540415 ERICH3Q5RHP9 1530 aa14.61□□□□□ -0.07
LRP6-204ENST00000540415 DIP2BQ9P265 1576 aa14.6□□□□□ -0.07
LRP6-204ENST00000540415 TOP2BQ02880 1626 aa14.59□□□□□ -0.07
LRP6-204ENST00000540415 MAPKBP1O60336 1514 aa14.58□□□□□ -0.08
LRP6-204ENST00000540415 NPM1P06748 294 aaKnown RBP eCLIP14.58□□□□□ -0.08
LRP6-204ENST00000540415 ADCY10Q96PN6 1610 aa14.57□□□□□ -0.08
LRP6-204ENST00000540415 BIVM-ERCC5R4GMW8 1640 aa14.57□□□□□ -0.08
LRP6-204ENST00000540415 SUPT5HO00267 1087 aaKnown RBP14.56□□□□□ -0.08
LRP6-204ENST00000540415 RUSC2Q8N2Y8 1516 aa14.56□□□□□ -0.08
LRP6-204ENST00000540415 KDM6BO15054 1643 aa14.55□□□□□ -0.08
LRP6-204ENST00000540415 TTBK1Q5TCY1 1321 aaPredicted RBP14.47□□□□□ -0.09
LRP6-204ENST00000540415 TSPOAP1O95153 1857 aa14.47□□□□□ -0.09
LRP6-204ENST00000540415 KIAA0586Q9BVV6 1533 aa14.44□□□□□ -0.1
LRP6-204ENST00000540415 ADGRL1O94910 1474 aa14.43□□□□□ -0.1
LRP6-204ENST00000540415 IGF1RP08069 1367 aa14.41□□□□□ -0.1
LRP6-204ENST00000540415 PTPRGP23470 1445 aa14.41□□□□□ -0.1
LRP6-204ENST00000540415 COL17A1Q9UMD9 1497 aaPredicted RBP14.4□□□□□ -0.1
LRP6-204ENST00000540415 ASXL2Q76L83 1435 aa14.39□□□□□ -0.11
LRP6-204ENST00000540415 PPRC1Q5VV67 1664 aaKnown RBP14.38□□□□□ -0.11
LRP6-204ENST00000540415 ABCC2Q92887 1545 aa14.36□□□□□ -0.11
LRP6-204ENST00000540415 HECW2Q9P2P5 1572 aa14.34□□□□□ -0.11
LRP6-204ENST00000540415 TNIKQ9UKE5 1360 aa14.34□□□□□ -0.11
LRP6-204ENST00000540415 PLB1Q6P1J6 1458 aa14.32□□□□□ -0.12
LRP6-204ENST00000540415 GLI2P10070 1586 aa14.32□□□□□ -0.12
LRP6-204ENST00000540415 KIF27Q86VH2 1401 aa14.31□□□□□ -0.12
LRP6-204ENST00000540415 EPRSP07814 1512 aaKnown RBP14.29□□□□□ -0.12
LRP6-204ENST00000540415 CUL7Q14999 1698 aa14.28□□□□□ -0.12
LRP6-204ENST00000540415 CARMIL1Q5VZK9 1371 aa14.28□□□□□ -0.12
LRP6-204ENST00000540415 CARMIL2Q6F5E8 1435 aa14.28□□□□□ -0.12
LRP6-204ENST00000540415 UACAQ9BZF9 1416 aa14.28□□□□□ -0.12
LRP6-204ENST00000540415 UHRF1BP1LA0JNW5 1464 aa14.27□□□□□ -0.12
LRP6-204ENST00000540415 DISP1Q96F81 1524 aa14.25□□□□□ -0.13
LRP6-204ENST00000540415 MAP3K4Q9Y6R4 1608 aa14.23□□□□□ -0.13
LRP6-204ENST00000540415 IQGAP2Q13576 1575 aa14.23□□□□□ -0.13
LRP6-204ENST00000540415 KDM5BQ9UGL1 1544 aa14.23□□□□□ -0.13
LRP6-204ENST00000540415 TEX14Q8IWB6 1497 aa14.21□□□□□ -0.13
LRP6-204ENST00000540415 ZCCHC11Q5TAX3 1644 aaKnown RBP14.19□□□□□ -0.14
LRP6-204ENST00000540415 WDR7Q9Y4E6 1490 aa14.15□□□□□ -0.14
LRP6-204ENST00000540415 FBXO41Q8TF61 875 aa14.14□□□□□ -0.15
LRP6-204ENST00000540415 UGGT2Q9NYU1 1516 aa14.14□□□□□ -0.15
LRP6-204ENST00000540415 KCNH8Q96L42 1107 aa14.13□□□□□ -0.15
LRP6-204ENST00000540415 KIAA0556O60303 1618 aa14.12□□□□□ -0.15
LRP6-204ENST00000540415 CD109Q6YHK3 1445 aa14.12□□□□□ -0.15
LRP6-204ENST00000540415 MAGI3Q5TCQ9 1506 aa14.1□□□□□ -0.15
LRP6-204ENST00000540415 KIF21BO75037 1637 aa14.09□□□□□ -0.15
LRP6-204ENST00000540415 RAPGEF2Q9Y4G8 1499 aa14.08□□□□□ -0.16
LRP6-204ENST00000540415 ARID3CA6NKF2 412 aa14.05□□□□□ -0.16
LRP6-204ENST00000540415 PTPRMP28827 1452 aa14.03□□□□□ -0.16
LRP6-204ENST00000540415 ABCA8O94911 1581 aa14.03□□□□□ -0.16
LRP6-204ENST00000540415 CFAP43Q8NDM7 1665 aa14.03□□□□□ -0.16
LRP6-204ENST00000540415 RAPGEF3O95398 923 aa14□□□□□ -0.17
LRP6-204ENST00000540415 ARAP3Q8WWN8 1544 aa14□□□□□ -0.17
LRP6-204ENST00000540415 ADAMTSL3P82987 1691 aa13.98□□□□□ -0.17
LRP6-204ENST00000540415 LMTK3Q96Q04 1460 aa13.95□□□□□ -0.18
LRP6-204ENST00000540415 ATP10BO94823 1461 aa13.94□□□□□ -0.18
LRP6-204ENST00000540415 GOLGA3Q08378 1498 aa13.94□□□□□ -0.18
LRP6-204ENST00000540415 PCF11O94913 1555 aaKnown RBP13.94□□□□□ -0.18
LRP6-204ENST00000540415 P3H3Q8IVL6 736 aa13.94□□□□□ -0.18
LRP6-204ENST00000540415 ARID4BQ4LE39 1312 aaPredicted RBP13.93□□□□□ -0.18
LRP6-204ENST00000540415 HSPA2P54652 639 aa13.93□□□□□ -0.18
LRP6-204ENST00000540415 MADDQ8WXG6 1647 aa13.93□□□□□ -0.18
LRP6-204ENST00000540415 PLPPR3Q6T4P5 718 aa13.91□□□□□ -0.18
LRP6-204ENST00000540415 FRMPD1Q5SYB0 1578 aa13.91□□□□□ -0.18
LRP6-204ENST00000540415 CTTNBP2Q8WZ74 1663 aa13.91□□□□□ -0.18
LRP6-204ENST00000540415 BCORL1Q5H9F3 1711 aa13.9□□□□□ -0.18
LRP6-204ENST00000540415 ABCA9Q8IUA7 1624 aa13.89□□□□□ -0.19
LRP6-204ENST00000540415 PHLDB1Q86UU1 1377 aa13.87□□□□□ -0.19
LRP6-204ENST00000540415 NEO1Q92859 1461 aa13.87□□□□□ -0.19
LRP6-204ENST00000540415 PRXQ9BXM0 1461 aa13.86□□□□□ -0.19
LRP6-204ENST00000540415 ILDR2Q71H61 639 aa13.85□□□□□ -0.19
LRP6-204ENST00000540415 CERKQ8TCT0 537 aa13.84□□□□□ -0.19
LRP6-204ENST00000540415 RIMS1Q86UR5 1692 aaKnown RBP13.84□□□□□ -0.19
LRP6-204ENST00000540415 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.83□□□□□ -0.2
LRP6-204ENST00000540415 HNRNPUL2Q1KMD3 747 aaKnown RBP13.83□□□□□ -0.2
LRP6-204ENST00000540415 ARHGEF40Q8TER5 1519 aa13.83□□□□□ -0.2
LRP6-204ENST00000540415 MLECQ14165 292 aa13.8□□□□□ -0.2
LRP6-204ENST00000540415 DENND4BO75064 1496 aaPredicted RBP13.8□□□□□ -0.2
LRP6-204ENST00000540415 SIGLEC1Q9BZZ2 1709 aa13.79□□□□□ -0.2
LRP6-204ENST00000540415 YEATS2Q9ULM3 1422 aa13.79□□□□□ -0.2
LRP6-204ENST00000540415 NUP153P49790 1475 aaKnown RBP13.79□□□□□ -0.2
LRP6-204ENST00000540415 AKNAQ7Z591 1439 aa13.77□□□□□ -0.21
LRP6-204ENST00000540415 RAPGEF6Q8TEU7 1601 aa13.77□□□□□ -0.21
LRP6-204ENST00000540415 DISP3Q9P2K9 1392 aa13.77□□□□□ -0.21
LRP6-204ENST00000540415 FHOD3Q2V2M9 1422 aa13.76□□□□□ -0.21
LRP6-204ENST00000540415 RANGAP1P46060 587 aaPredicted RBP13.76□□□□□ -0.21
LRP6-204ENST00000540415 SAMD9Q5K651 1589 aa13.75□□□□□ -0.21
LRP6-204ENST00000540415 FAM9AQ8IZU1 332 aaPredicted RBP13.75□□□□□ -0.21
LRP6-204ENST00000540415 RICTORQ6R327 1708 aa13.75□□□□□ -0.21
LRP6-204ENST00000540415 FANCAO15360 1455 aa13.74□□□□□ -0.21
LRP6-204ENST00000540415 SOCS7O14512 581 aa13.73□□□□□ -0.21
LRP6-204ENST00000540415 ZFYVE16Q7Z3T8 1539 aa13.73□□□□□ -0.21
LRP6-204ENST00000540415 POGZQ7Z3K3 1410 aa13.73□□□□□ -0.21
LRP6-204ENST00000540415 CEBPAP49715 358 aaPredicted RBP13.72□□□□□ -0.21
LRP6-204ENST00000540415 ZMYM4Q5VZL5 1548 aa13.71□□□□□ -0.21
LRP6-204ENST00000540415 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.71□□□□□ -0.21
LRP6-204ENST00000540415 PLEKHD1A6NEE1 506 aa13.7□□□□□ -0.22
LRP6-204ENST00000540415 TTC37Q6PGP7 1564 aa13.7□□□□□ -0.22
LRP6-204ENST00000540415 HECW1Q76N89 1606 aa13.68□□□□□ -0.22
LRP6-204ENST00000540415 EFCAB5A4FU69 1503 aa13.68□□□□□ -0.22
LRP6-204ENST00000540415 SCAPERQ9BY12 1400 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms