RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 FHAD1B1AJZ9 1412 aa10.68□□□□□ -0.7
CPSF7-219ENST00000539952 CEP170Q5SW79 1584 aa10.67□□□□□ -0.7
CPSF7-219ENST00000539952 PRG4Q92954 1404 aaPredicted RBP10.67□□□□□ -0.7
CPSF7-219ENST00000539952 PBRM1Q86U86 1689 aa10.66□□□□□ -0.7
CPSF7-219ENST00000539952 ERCC6L2Q5T890 1561 aa10.66□□□□□ -0.7
CPSF7-219ENST00000539952 MSH5O43196 834 aa10.65□□□□□ -0.7
CPSF7-219ENST00000539952 ABCA5Q8WWZ7 1642 aa10.65□□□□□ -0.7
CPSF7-219ENST00000539952 KDM4FA0A1W2PPD8 638 aa10.64□□□□□ -0.71
CPSF7-219ENST00000539952 ABCC10Q5T3U5 1492 aa10.62□□□□□ -0.71
CPSF7-219ENST00000539952 SHROOM2Q13796 1616 aa10.6□□□□□ -0.71
CPSF7-219ENST00000539952 ERICH3Q5RHP9 1530 aa10.59□□□□□ -0.71
CPSF7-219ENST00000539952 SUPT5HO00267 1087 aaKnown RBP10.59□□□□□ -0.71
CPSF7-219ENST00000539952 ADAMTS12P58397 1594 aa10.58□□□□□ -0.72
CPSF7-219ENST00000539952 KIF13AQ9H1H9 1805 aa10.57□□□□□ -0.72
CPSF7-219ENST00000539952 MAPKBP1O60336 1514 aa10.54□□□□□ -0.72
CPSF7-219ENST00000539952 MAPK8IP2Q13387 824 aaPredicted RBP10.54□□□□□ -0.72
CPSF7-219ENST00000539952 TOP2BQ02880 1626 aa10.53□□□□□ -0.72
CPSF7-219ENST00000539952 LMTK3Q96Q04 1460 aa10.51□□□□□ -0.73
CPSF7-219ENST00000539952 KIAA0586Q9BVV6 1533 aa10.51□□□□□ -0.73
CPSF7-219ENST00000539952 PTPRGP23470 1445 aa10.5□□□□□ -0.73
CPSF7-219ENST00000539952 BIVM-ERCC5R4GMW8 1640 aa10.49□□□□□ -0.73
CPSF7-219ENST00000539952 SOCS7O14512 581 aa10.49□□□□□ -0.73
CPSF7-219ENST00000539952 IGF1RP08069 1367 aa10.49□□□□□ -0.73
CPSF7-219ENST00000539952 DIP2BQ9P265 1576 aa10.48□□□□□ -0.73
CPSF7-219ENST00000539952 KDM6BO15054 1643 aa10.48□□□□□ -0.73
CPSF7-219ENST00000539952 TTBK1Q5TCY1 1321 aaPredicted RBP10.46□□□□□ -0.73
CPSF7-219ENST00000539952 ADCY10Q96PN6 1610 aa10.45□□□□□ -0.74
CPSF7-219ENST00000539952 CARMIL2Q6F5E8 1435 aa10.45□□□□□ -0.74
CPSF7-219ENST00000539952 TNIKQ9UKE5 1360 aa10.45□□□□□ -0.74
CPSF7-219ENST00000539952 PLB1Q6P1J6 1458 aa10.44□□□□□ -0.74
CPSF7-219ENST00000539952 KIF27Q86VH2 1401 aa10.43□□□□□ -0.74
CPSF7-219ENST00000539952 NPM3O75607 178 aaKnown RBP10.42□□□□□ -0.74
CPSF7-219ENST00000539952 RUSC2Q8N2Y8 1516 aa10.42□□□□□ -0.74
CPSF7-219ENST00000539952 ASXL2Q76L83 1435 aa10.41□□□□□ -0.74
CPSF7-219ENST00000539952 CARMIL1Q5VZK9 1371 aa10.41□□□□□ -0.74
CPSF7-219ENST00000539952 TSPOAP1O95153 1857 aa10.41□□□□□ -0.74
CPSF7-219ENST00000539952 ABCC2Q92887 1545 aa10.4□□□□□ -0.74
CPSF7-219ENST00000539952 SCAF1Q9H7N4 1312 aaKnown RBP10.39□□□□□ -0.75
CPSF7-219ENST00000539952 NCBP3Q53F19 620 aaKnown RBP10.39□□□□□ -0.75
CPSF7-219ENST00000539952 GLI2P10070 1586 aa10.39□□□□□ -0.75
CPSF7-219ENST00000539952 UHRF1BP1LA0JNW5 1464 aa10.38□□□□□ -0.75
CPSF7-219ENST00000539952 UACAQ9BZF9 1416 aa10.38□□□□□ -0.75
CPSF7-219ENST00000539952 ADGRL1O94910 1474 aa10.37□□□□□ -0.75
CPSF7-219ENST00000539952 FBXO41Q8TF61 875 aa10.36□□□□□ -0.75
CPSF7-219ENST00000539952 TEX14Q8IWB6 1497 aa10.36□□□□□ -0.75
CPSF7-219ENST00000539952 COL17A1Q9UMD9 1497 aaPredicted RBP10.36□□□□□ -0.75
CPSF7-219ENST00000539952 FAM9AQ8IZU1 332 aaPredicted RBP10.33□□□□□ -0.76
CPSF7-219ENST00000539952 CNKSR2Q8WXI2 1034 aa10.33□□□□□ -0.76
CPSF7-219ENST00000539952 EPRSP07814 1512 aaKnown RBP10.33□□□□□ -0.76
CPSF7-219ENST00000539952 CUL7Q14999 1698 aa10.32□□□□□ -0.76
CPSF7-219ENST00000539952 KCNH8Q96L42 1107 aa10.32□□□□□ -0.76
CPSF7-219ENST00000539952 KDM5BQ9UGL1 1544 aa10.32□□□□□ -0.76
CPSF7-219ENST00000539952 EHMT2Q96KQ7 1210 aa10.31□□□□□ -0.76
CPSF7-219ENST00000539952 ILDR2Q71H61 639 aa10.3□□□□□ -0.76
CPSF7-219ENST00000539952 PPRC1Q5VV67 1664 aaKnown RBP10.28□□□□□ -0.76
CPSF7-219ENST00000539952 HECW2Q9P2P5 1572 aa10.28□□□□□ -0.76
CPSF7-219ENST00000539952 CD109Q6YHK3 1445 aa10.28□□□□□ -0.76
CPSF7-219ENST00000539952 DISP1Q96F81 1524 aa10.28□□□□□ -0.76
CPSF7-219ENST00000539952 IQGAP2Q13576 1575 aa10.27□□□□□ -0.76
CPSF7-219ENST00000539952 MAP3K4Q9Y6R4 1608 aa10.25□□□□□ -0.77
CPSF7-219ENST00000539952 WDR7Q9Y4E6 1490 aa10.24□□□□□ -0.77
CPSF7-219ENST00000539952 RAPGEF2Q9Y4G8 1499 aa10.24□□□□□ -0.77
CPSF7-219ENST00000539952 MAGI3Q5TCQ9 1506 aa10.24□□□□□ -0.77
CPSF7-219ENST00000539952 SLC4A1APQ9BWU0 796 aaKnown RBP10.24□□□□□ -0.77
CPSF7-219ENST00000539952 PHLDB1Q86UU1 1377 aa10.24□□□□□ -0.77
CPSF7-219ENST00000539952 UGGT2Q9NYU1 1516 aa10.23□□□□□ -0.77
CPSF7-219ENST00000539952 ZCCHC11Q5TAX3 1644 aaKnown RBP10.19□□□□□ -0.78
CPSF7-219ENST00000539952 GOLGA3Q08378 1498 aa10.19□□□□□ -0.78
CPSF7-219ENST00000539952 ARAP3Q8WWN8 1544 aa10.17□□□□□ -0.78
CPSF7-219ENST00000539952 DISP3Q9P2K9 1392 aa10.17□□□□□ -0.78
CPSF7-219ENST00000539952 ARID4BQ4LE39 1312 aaPredicted RBP10.17□□□□□ -0.78
CPSF7-219ENST00000539952 KIAA0556O60303 1618 aa10.16□□□□□ -0.78
CPSF7-219ENST00000539952 RAPGEF3O95398 923 aa10.16□□□□□ -0.78
CPSF7-219ENST00000539952 DMRT2Q9Y5R5 561 aa10.16□□□□□ -0.78
CPSF7-219ENST00000539952 PTPRMP28827 1452 aa10.15□□□□□ -0.78
CPSF7-219ENST00000539952 CFAP43Q8NDM7 1665 aa10.15□□□□□ -0.79
CPSF7-219ENST00000539952 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.14□□□□□ -0.79
CPSF7-219ENST00000539952 HNRNPUL2Q1KMD3 747 aaKnown RBP10.14□□□□□ -0.79
CPSF7-219ENST00000539952 ARID3CA6NKF2 412 aa10.12□□□□□ -0.79
CPSF7-219ENST00000539952 P3H3Q8IVL6 736 aa10.12□□□□□ -0.79
CPSF7-219ENST00000539952 ABCA8O94911 1581 aa10.11□□□□□ -0.79
CPSF7-219ENST00000539952 CERKQ8TCT0 537 aa10.11□□□□□ -0.79
CPSF7-219ENST00000539952 ATP10BO94823 1461 aa10.1□□□□□ -0.79
CPSF7-219ENST00000539952 PLEKHD1A6NEE1 506 aa10.1□□□□□ -0.79
CPSF7-219ENST00000539952 NEO1Q92859 1461 aa10.09□□□□□ -0.79
CPSF7-219ENST00000539952 CSRNP3Q8WYN3 585 aa10.08□□□□□ -0.8
CPSF7-219ENST00000539952 RNF216Q9NWF9 866 aaPredicted RBP10.08□□□□□ -0.8
CPSF7-219ENST00000539952 KIF21BO75037 1637 aa10.07□□□□□ -0.8
CPSF7-219ENST00000539952 ADAMTSL3P82987 1691 aa10.07□□□□□ -0.8
CPSF7-219ENST00000539952 HSPA2P54652 639 aa10.07□□□□□ -0.8
CPSF7-219ENST00000539952 POGZQ7Z3K3 1410 aa10.06□□□□□ -0.8
CPSF7-219ENST00000539952 ZBTB22O15209 634 aa10.05□□□□□ -0.8
CPSF7-219ENST00000539952 PCF11O94913 1555 aaKnown RBP10.05□□□□□ -0.8
CPSF7-219ENST00000539952 PRXQ9BXM0 1461 aa10.04□□□□□ -0.8
CPSF7-219ENST00000539952 DENND4BO75064 1496 aaPredicted RBP10.03□□□□□ -0.8
CPSF7-219ENST00000539952 AKNAQ7Z591 1439 aa10.02□□□□□ -0.81
CPSF7-219ENST00000539952 ABCA9Q8IUA7 1624 aa10.02□□□□□ -0.81
CPSF7-219ENST00000539952 FHOD3Q2V2M9 1422 aa10.01□□□□□ -0.81
CPSF7-219ENST00000539952 HOXD11P31277 338 aaPredicted RBP10.01□□□□□ -0.81
CPSF7-219ENST00000539952 MLECQ14165 292 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms