RNA–Protein interactions for RNA: ENST00000539408.5

GABARAPL1-207, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 5

Gene GABARAPL1, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-207ENST00000539408 ERICH3Q5RHP9 1530 aa21.9■■□□□ 1.1
GABARAPL1-207ENST00000539408 TOP2BQ02880 1626 aa21.87■■□□□ 1.09
GABARAPL1-207ENST00000539408 BIVM-ERCC5R4GMW8 1640 aa21.84■■□□□ 1.09
GABARAPL1-207ENST00000539408 JPH4Q96JJ6 628 aa21.84■■□□□ 1.09
GABARAPL1-207ENST00000539408 PRG4Q92954 1404 aaPredicted RBP21.82■■□□□ 1.08
GABARAPL1-207ENST00000539408 SUPT5HO00267 1087 aaKnown RBP21.82■■□□□ 1.08
GABARAPL1-207ENST00000539408 NPM1P06748 294 aaKnown RBP eCLIP21.81■■□□□ 1.08
GABARAPL1-207ENST00000539408 FAM69CQ0P6D2 419 aa21.73■■□□□ 1.07
GABARAPL1-207ENST00000539408 KIF13AQ9H1H9 1805 aa21.73■■□□□ 1.07
GABARAPL1-207ENST00000539408 ABCC10Q5T3U5 1492 aa21.72■■□□□ 1.07
GABARAPL1-207ENST00000539408 MAPKBP1O60336 1514 aa21.69■■□□□ 1.06
GABARAPL1-207ENST00000539408 RUSC2Q8N2Y8 1516 aa21.64■■□□□ 1.05
GABARAPL1-207ENST00000539408 PPP6R1Q9UPN7 881 aa21.62■■□□□ 1.05
GABARAPL1-207ENST00000539408 KIAA0586Q9BVV6 1533 aa21.6■■□□□ 1.05
GABARAPL1-207ENST00000539408 DIP2BQ9P265 1576 aa21.57■■□□□ 1.04
GABARAPL1-207ENST00000539408 ADCY10Q96PN6 1610 aa21.54■■□□□ 1.04
GABARAPL1-207ENST00000539408 ADRA2BP18089 450 aa21.53■■□□□ 1.04
GABARAPL1-207ENST00000539408 PLPPR3Q6T4P5 718 aa21.53■■□□□ 1.04
GABARAPL1-207ENST00000539408 IGF1RP08069 1367 aa21.52■■□□□ 1.04
GABARAPL1-207ENST00000539408 KIF27Q86VH2 1401 aa21.51■■□□□ 1.03
GABARAPL1-207ENST00000539408 KDM6BO15054 1643 aa21.51■■□□□ 1.03
GABARAPL1-207ENST00000539408 PTPRGP23470 1445 aa21.47■■□□□ 1.03
GABARAPL1-207ENST00000539408 CUL7Q14999 1698 aa21.47■■□□□ 1.03
GABARAPL1-207ENST00000539408 KDM4FA0A1W2PPD8 638 aa21.47■■□□□ 1.03
GABARAPL1-207ENST00000539408 CARMIL2Q6F5E8 1435 aa21.44■■□□□ 1.02
GABARAPL1-207ENST00000539408 TNIKQ9UKE5 1360 aa21.41■■□□□ 1.02
GABARAPL1-207ENST00000539408 ABCC2Q92887 1545 aa21.39■■□□□ 1.01
GABARAPL1-207ENST00000539408 PLB1Q6P1J6 1458 aa21.39■■□□□ 1.01
GABARAPL1-207ENST00000539408 CARMIL1Q5VZK9 1371 aa21.38■■□□□ 1.01
GABARAPL1-207ENST00000539408 TSPOAP1O95153 1857 aa21.35■■□□□ 1.01
GABARAPL1-207ENST00000539408 GLI2P10070 1586 aa21.34■■□□□ 1.01
GABARAPL1-207ENST00000539408 UHRF1BP1LA0JNW5 1464 aa21.33■■□□□ 1.01
GABARAPL1-207ENST00000539408 ASXL2Q76L83 1435 aa21.33■■□□□ 1.01
GABARAPL1-207ENST00000539408 TTBK1Q5TCY1 1321 aaPredicted RBP21.29■■□□□ 1
GABARAPL1-207ENST00000539408 UACAQ9BZF9 1416 aa21.29■■□□□ 1
GABARAPL1-207ENST00000539408 IQGAP2Q13576 1575 aa21.27■■□□□ 1
GABARAPL1-207ENST00000539408 TEX14Q8IWB6 1497 aa21.23■□□□□ 0.99
GABARAPL1-207ENST00000539408 KDM5BQ9UGL1 1544 aa21.21■□□□□ 0.99
GABARAPL1-207ENST00000539408 ADGRL1O94910 1474 aa21.2■□□□□ 0.98
GABARAPL1-207ENST00000539408 EPRSP07814 1512 aaKnown RBP21.19■□□□□ 0.98
GABARAPL1-207ENST00000539408 PPRC1Q5VV67 1664 aaKnown RBP21.19■□□□□ 0.98
GABARAPL1-207ENST00000539408 ILDR1Q86SU0 546 aaPredicted RBP21.19■□□□□ 0.98
GABARAPL1-207ENST00000539408 DISP1Q96F81 1524 aa21.19■□□□□ 0.98
GABARAPL1-207ENST00000539408 UGGT2Q9NYU1 1516 aa21.15■□□□□ 0.98
GABARAPL1-207ENST00000539408 MAP3K4Q9Y6R4 1608 aa21.15■□□□□ 0.98
GABARAPL1-207ENST00000539408 COL17A1Q9UMD9 1497 aaPredicted RBP21.13■□□□□ 0.97
GABARAPL1-207ENST00000539408 RAPGEF2Q9Y4G8 1499 aa21.13■□□□□ 0.97
GABARAPL1-207ENST00000539408 ZCCHC11Q5TAX3 1644 aaKnown RBP21.07■□□□□ 0.96
GABARAPL1-207ENST00000539408 WDR7Q9Y4E6 1490 aa21.07■□□□□ 0.96
GABARAPL1-207ENST00000539408 KIAA0556O60303 1618 aa21.06■□□□□ 0.96
GABARAPL1-207ENST00000539408 FAM9AQ8IZU1 332 aaPredicted RBP21.03■□□□□ 0.96
GABARAPL1-207ENST00000539408 GOLGA3Q08378 1498 aa21.02■□□□□ 0.96
GABARAPL1-207ENST00000539408 MAGI3Q5TCQ9 1506 aa21.02■□□□□ 0.96
GABARAPL1-207ENST00000539408 CD109Q6YHK3 1445 aa21.01■□□□□ 0.95
GABARAPL1-207ENST00000539408 HECW2Q9P2P5 1572 aa20.99■□□□□ 0.95
GABARAPL1-207ENST00000539408 CFAP43Q8NDM7 1665 aa20.96■□□□□ 0.95
GABARAPL1-207ENST00000539408 KCNH8Q96L42 1107 aa20.95■□□□□ 0.94
GABARAPL1-207ENST00000539408 ABCA8O94911 1581 aa20.91■□□□□ 0.94
GABARAPL1-207ENST00000539408 PHLDB1Q86UU1 1377 aa20.91■□□□□ 0.94
GABARAPL1-207ENST00000539408 CTTNBP2Q8WZ74 1663 aa20.88■□□□□ 0.93
GABARAPL1-207ENST00000539408 ARAP3Q8WWN8 1544 aa20.87■□□□□ 0.93
GABARAPL1-207ENST00000539408 PRXQ9BXM0 1461 aa20.81■□□□□ 0.92
GABARAPL1-207ENST00000539408 FBXO41Q8TF61 875 aa20.79■□□□□ 0.92
GABARAPL1-207ENST00000539408 ATP10BO94823 1461 aa20.76■□□□□ 0.91
GABARAPL1-207ENST00000539408 KIF21BO75037 1637 aa20.75■□□□□ 0.91
GABARAPL1-207ENST00000539408 NEO1Q92859 1461 aa20.74■□□□□ 0.91
GABARAPL1-207ENST00000539408 ABCA9Q8IUA7 1624 aa20.71■□□□□ 0.91
GABARAPL1-207ENST00000539408 PTPRMP28827 1452 aa20.71■□□□□ 0.91
GABARAPL1-207ENST00000539408 RAPGEF3O95398 923 aa20.68■□□□□ 0.9
GABARAPL1-207ENST00000539408 P3H3Q8IVL6 736 aa20.68■□□□□ 0.9
GABARAPL1-207ENST00000539408 ADAMTSL3P82987 1691 aa20.67■□□□□ 0.9
GABARAPL1-207ENST00000539408 ARID3CA6NKF2 412 aa20.67■□□□□ 0.9
GABARAPL1-207ENST00000539408 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.66■□□□□ 0.9
GABARAPL1-207ENST00000539408 HNRNPUL2Q1KMD3 747 aaKnown RBP20.66■□□□□ 0.9
GABARAPL1-207ENST00000539408 ARID4BQ4LE39 1312 aaPredicted RBP20.64■□□□□ 0.89
GABARAPL1-207ENST00000539408 CSRNP3Q8WYN3 585 aa20.61■□□□□ 0.89
GABARAPL1-207ENST00000539408 RAPGEF6Q8TEU7 1601 aa20.6■□□□□ 0.89
GABARAPL1-207ENST00000539408 SAMD9Q5K651 1589 aa20.6■□□□□ 0.89
GABARAPL1-207ENST00000539408 PLEKHD1A6NEE1 506 aa20.6■□□□□ 0.89
GABARAPL1-207ENST00000539408 BCORL1Q5H9F3 1711 aa20.58■□□□□ 0.89
GABARAPL1-207ENST00000539408 PCF11O94913 1555 aaKnown RBP20.57■□□□□ 0.88
GABARAPL1-207ENST00000539408 DENND4BO75064 1496 aaPredicted RBP20.56■□□□□ 0.88
GABARAPL1-207ENST00000539408 POGZQ7Z3K3 1410 aa20.55■□□□□ 0.88
GABARAPL1-207ENST00000539408 NUP153P49790 1475 aaKnown RBP20.54■□□□□ 0.88
GABARAPL1-207ENST00000539408 LMTK3Q96Q04 1460 aa20.53■□□□□ 0.88
GABARAPL1-207ENST00000539408 FRMPD1Q5SYB0 1578 aa20.53■□□□□ 0.88
GABARAPL1-207ENST00000539408 FHOD3Q2V2M9 1422 aa20.53■□□□□ 0.88
GABARAPL1-207ENST00000539408 MADDQ8WXG6 1647 aa20.52■□□□□ 0.88
GABARAPL1-207ENST00000539408 AKNAQ7Z591 1439 aa20.52■□□□□ 0.87
GABARAPL1-207ENST00000539408 ARHGEF40Q8TER5 1519 aa20.5■□□□□ 0.87
GABARAPL1-207ENST00000539408 CFAP74Q9C0B2 1584 aa20.5■□□□□ 0.87
GABARAPL1-207ENST00000539408 EEA1Q15075 1411 aa20.49■□□□□ 0.87
GABARAPL1-207ENST00000539408 FANCAO15360 1455 aa20.49■□□□□ 0.87
GABARAPL1-207ENST00000539408 MAGI2Q86UL8 1455 aa20.49■□□□□ 0.87
GABARAPL1-207ENST00000539408 RICTORQ6R327 1708 aa20.44■□□□□ 0.86
GABARAPL1-207ENST00000539408 ZMYM4Q5VZL5 1548 aa20.44■□□□□ 0.86
GABARAPL1-207ENST00000539408 EFCAB5A4FU69 1503 aa20.43■□□□□ 0.86
GABARAPL1-207ENST00000539408 RIMS1Q86UR5 1692 aaKnown RBP20.42■□□□□ 0.86
GABARAPL1-207ENST00000539408 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.42■□□□□ 0.86
GABARAPL1-207ENST00000539408 ZFYVE16Q7Z3T8 1539 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms