RNA–Protein interactions for RNA: ENST00000539382.5

CTCFL-212, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-212ENST00000539382 VPS8Q8N3P4 1428 aa17.44■□□□□ 0.38
CTCFL-212ENST00000539382 FHAD1B1AJZ9 1412 aa17.43■□□□□ 0.38
CTCFL-212ENST00000539382 TRIM26Q12899 539 aaPredicted RBP17.42■□□□□ 0.38
CTCFL-212ENST00000539382 ADAMTS12P58397 1594 aa17.42■□□□□ 0.38
CTCFL-212ENST00000539382 SNAPC4Q5SXM2 1469 aa17.39■□□□□ 0.37
CTCFL-212ENST00000539382 TTBK1Q5TCY1 1321 aaPredicted RBP17.38■□□□□ 0.37
CTCFL-212ENST00000539382 CTTNBP2Q8WZ74 1663 aa17.37■□□□□ 0.37
CTCFL-212ENST00000539382 P3H3Q8IVL6 736 aa17.35■□□□□ 0.37
CTCFL-212ENST00000539382 MAGI1Q96QZ7 1491 aaPredicted RBP17.3■□□□□ 0.36
CTCFL-212ENST00000539382 GRIN2AQ12879 1464 aa17.28■□□□□ 0.36
CTCFL-212ENST00000539382 FHOD3Q2V2M9 1422 aa17.28■□□□□ 0.36
CTCFL-212ENST00000539382 SYNJ2O15056 1496 aa17.26■□□□□ 0.35
CTCFL-212ENST00000539382 CHMP7Q8WUX9 453 aaPredicted RBP17.25■□□□□ 0.35
CTCFL-212ENST00000539382 EFCAB5A4FU69 1503 aa17.25■□□□□ 0.35
CTCFL-212ENST00000539382 FBLN2P98095 1184 aa17.24■□□□□ 0.35
CTCFL-212ENST00000539382 IQGAP2Q13576 1575 aa17.23■□□□□ 0.35
CTCFL-212ENST00000539382 SAMD9Q5K651 1589 aa17.23■□□□□ 0.35
CTCFL-212ENST00000539382 APLP2Q06481 763 aa17.22■□□□□ 0.35
CTCFL-212ENST00000539382 KANK4Q5T7N3 995 aaPredicted RBP17.22■□□□□ 0.35
CTCFL-212ENST00000539382 CEP170Q5SW79 1584 aa17.2■□□□□ 0.34
CTCFL-212ENST00000539382 KIAA0586Q9BVV6 1533 aa17.2■□□□□ 0.34
CTCFL-212ENST00000539382 KCNA4P22459 653 aa17.18■□□□□ 0.34
CTCFL-212ENST00000539382 PCF11O94913 1555 aaKnown RBP17.17■□□□□ 0.34
CTCFL-212ENST00000539382 NUP160Q12769 1436 aa17.15■□□□□ 0.34
CTCFL-212ENST00000539382 UGGT2Q9NYU1 1516 aa17.15■□□□□ 0.34
CTCFL-212ENST00000539382 SENP3Q9H4L4 574 aaPredicted RBP17.15■□□□□ 0.34
CTCFL-212ENST00000539382 ATP1B4Q9UN42 357 aaPredicted RBP17.12■□□□□ 0.33
CTCFL-212ENST00000539382 FMN1Q68DA7 1419 aa17.12■□□□□ 0.33
CTCFL-212ENST00000539382 CASKIN1Q8WXD9 1431 aa17.11■□□□□ 0.33
CTCFL-212ENST00000539382 DISP1Q96F81 1524 aa17.11■□□□□ 0.33
CTCFL-212ENST00000539382 TIAM1Q13009 1591 aa17.1■□□□□ 0.33
CTCFL-212ENST00000539382 FYCO1Q9BQS8 1478 aa17.1■□□□□ 0.33
CTCFL-212ENST00000539382 MAP3K1Q13233 1512 aa17.07■□□□□ 0.32
CTCFL-212ENST00000539382 JPH4Q96JJ6 628 aa17.07■□□□□ 0.32
CTCFL-212ENST00000539382 CHD1O14646 1710 aa17.07■□□□□ 0.32
CTCFL-212ENST00000539382 KIAA0556O60303 1618 aa17.06■□□□□ 0.32
CTCFL-212ENST00000539382 HRCP23327 699 aa17.05■□□□□ 0.32
CTCFL-212ENST00000539382 LRRC9Q6ZRR7 1453 aa17.04■□□□□ 0.32
CTCFL-212ENST00000539382 LRRIQ1Q96JM4 1722 aa17.04■□□□□ 0.32
CTCFL-212ENST00000539382 CFAP43Q8NDM7 1665 aa17.03■□□□□ 0.32
CTCFL-212ENST00000539382 ADRA2BP18089 450 aa16.99■□□□□ 0.31
CTCFL-212ENST00000539382 ARID3CA6NKF2 412 aa16.95■□□□□ 0.3
CTCFL-212ENST00000539382 PHLDB1Q86UU1 1377 aa16.94■□□□□ 0.3
CTCFL-212ENST00000539382 CARMIL2Q6F5E8 1435 aa16.94■□□□□ 0.3
CTCFL-212ENST00000539382 HNRNPUL2Q1KMD3 747 aaKnown RBP16.94■□□□□ 0.3
CTCFL-212ENST00000539382 PRG4Q92954 1404 aaPredicted RBP16.93■□□□□ 0.3
CTCFL-212ENST00000539382 RRBP1Q9P2E9 1410 aaKnown RBP16.93■□□□□ 0.3
CTCFL-212ENST00000539382 EPRSP07814 1512 aaKnown RBP16.92■□□□□ 0.3
CTCFL-212ENST00000539382 MAGI3Q5TCQ9 1506 aa16.92■□□□□ 0.3
CTCFL-212ENST00000539382 PLB1Q6P1J6 1458 aa16.92■□□□□ 0.3
CTCFL-212ENST00000539382 HECW1Q76N89 1606 aa16.92■□□□□ 0.3
CTCFL-212ENST00000539382 CDK13Q14004 1512 aaKnown RBP16.92■□□□□ 0.3
CTCFL-212ENST00000539382 NUP153P49790 1475 aaKnown RBP16.91■□□□□ 0.3
CTCFL-212ENST00000539382 MTUS2Q5JR59 1369 aa16.89■□□□□ 0.3
CTCFL-212ENST00000539382 SHROOM2Q13796 1616 aa16.89■□□□□ 0.29
CTCFL-212ENST00000539382 CCDC18Q5T9S5 1454 aa16.89■□□□□ 0.29
CTCFL-212ENST00000539382 RAPGEF6Q8TEU7 1601 aa16.89■□□□□ 0.29
CTCFL-212ENST00000539382 CCNB3Q8WWL7 1395 aa16.88■□□□□ 0.29
CTCFL-212ENST00000539382 ERCC6L2Q5T890 1561 aa16.88■□□□□ 0.29
CTCFL-212ENST00000539382 CLASP1Q7Z460 1538 aa16.87■□□□□ 0.29
CTCFL-212ENST00000539382 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.87■□□□□ 0.29
CTCFL-212ENST00000539382 EHBP1L1Q8N3D4 1523 aa16.83■□□□□ 0.28
CTCFL-212ENST00000539382 NCOA2Q15596 1464 aa16.82■□□□□ 0.28
CTCFL-212ENST00000539382 PTPRGP23470 1445 aa16.82■□□□□ 0.28
CTCFL-212ENST00000539382 ABCA8O94911 1581 aa16.82■□□□□ 0.28
CTCFL-212ENST00000539382 ITGAEP38570 1179 aa16.79■□□□□ 0.28
CTCFL-212ENST00000539382 ARHGEF11O15085 1522 aa16.79■□□□□ 0.28
CTCFL-212ENST00000539382 SUPT6HQ7KZ85 1726 aaKnown RBP16.78■□□□□ 0.28
CTCFL-212ENST00000539382 FAM50AQ14320 339 aaKnown RBP16.77■□□□□ 0.28
CTCFL-212ENST00000539382 FGD6Q6ZV73 1430 aa16.76■□□□□ 0.27
CTCFL-212ENST00000539382 ATP10BO94823 1461 aa16.76■□□□□ 0.27
CTCFL-212ENST00000539382 MYOM3Q5VTT5 1437 aa16.75■□□□□ 0.27
CTCFL-212ENST00000539382 CCER1Q8TC90 406 aaPredicted RBP16.74■□□□□ 0.27
CTCFL-212ENST00000539382 UACAQ9BZF9 1416 aa16.71■□□□□ 0.27
CTCFL-212ENST00000539382 OSCARQ8IYS5 282 aa16.71■□□□□ 0.27
CTCFL-212ENST00000539382 CDK11AQ9UQ88 783 aaPredicted RBP16.71■□□□□ 0.27
CTCFL-212ENST00000539382 TROQ12816 1431 aaPredicted RBP16.7■□□□□ 0.26
CTCFL-212ENST00000539382 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.69■□□□□ 0.26
CTCFL-212ENST00000539382 KIF14Q15058 1648 aa16.67■□□□□ 0.26
CTCFL-212ENST00000539382 PTPRKQ15262 1439 aa16.66■□□□□ 0.26
CTCFL-212ENST00000539382 PTPN23Q9H3S7 1636 aa16.65■□□□□ 0.26
CTCFL-212ENST00000539382 PLEKHD1A6NEE1 506 aa16.65■□□□□ 0.26
CTCFL-212ENST00000539382 ABCC2Q92887 1545 aa16.65■□□□□ 0.26
CTCFL-212ENST00000539382 ZEB1P37275 1124 aaPredicted RBP16.63■□□□□ 0.25
CTCFL-212ENST00000539382 TCOF1Q13428 1488 aaKnown RBP16.62■□□□□ 0.25
CTCFL-212ENST00000539382 ZNF644Q9H582 1327 aaPredicted RBP16.62■□□□□ 0.25
CTCFL-212ENST00000539382 ADCY10Q96PN6 1610 aa16.62■□□□□ 0.25
CTCFL-212ENST00000539382 MIA2Q96PC5 1412 aa16.61■□□□□ 0.25
CTCFL-212ENST00000539382 RAB3GAP2Q9H2M9 1393 aa16.6■□□□□ 0.25
CTCFL-212ENST00000539382 GPATCH8Q9UKJ3 1502 aaKnown RBP16.6■□□□□ 0.25
CTCFL-212ENST00000539382 UHRF1BP1LA0JNW5 1464 aa16.58■□□□□ 0.25
CTCFL-212ENST00000539382 ABCC10Q5T3U5 1492 aa16.58■□□□□ 0.25
CTCFL-212ENST00000539382 SETD5Q9C0A6 1442 aa16.57■□□□□ 0.24
CTCFL-212ENST00000539382 DHX57Q6P158 1386 aaKnown RBP16.57■□□□□ 0.24
CTCFL-212ENST00000539382 KDM5BQ9UGL1 1544 aa16.55■□□□□ 0.24
CTCFL-212ENST00000539382 CFDP1Q9UEE9 299 aaPredicted RBP16.55■□□□□ 0.24
CTCFL-212ENST00000539382 ZCCHC11Q5TAX3 1644 aaKnown RBP16.55■□□□□ 0.24
CTCFL-212ENST00000539382 CHIC2Q9UKJ5 165 aa16.53■□□□□ 0.24
CTCFL-212ENST00000539382 CDC42BPAQ5VT25 1732 aa16.52■□□□□ 0.24
CTCFL-212ENST00000539382 PPP6R1Q9UPN7 881 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms