RNA–Protein interactions for RNA: ENST00000539250.1

CCAR1-210, Transcript of cell division cycle and apoptosis regulator 1, humanhuman

TSL 2

Gene CCAR1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCAR1-210ENST00000539250 EVX2Q03828 476 aa12.79□□□□□ -0.36
CCAR1-210ENST00000539250 PLEKHG5O94827 1062 aa12.72□□□□□ -0.37
CCAR1-210ENST00000539250 NPM1P06748 294 aaKnown RBP eCLIP12.71□□□□□ -0.37
CCAR1-210ENST00000539250 CD44P16070 742 aaKnown RBP12.68□□□□□ -0.38
CCAR1-210ENST00000539250 NCAPD3P42695 1498 aa12.67□□□□□ -0.38
CCAR1-210ENST00000539250 SMARCA4P51532 1647 aa12.66□□□□□ -0.38
CCAR1-210ENST00000539250 IFNLR1Q8IU57 520 aaPredicted RBP12.65□□□□□ -0.38
CCAR1-210ENST00000539250 ZBTB47Q9UFB7 747 aaPredicted RBP12.63□□□□□ -0.39
CCAR1-210ENST00000539250 ATAD2BQ9ULI0 1458 aa12.63□□□□□ -0.39
CCAR1-210ENST00000539250 SMARCA2P51531 1590 aa12.62□□□□□ -0.39
CCAR1-210ENST00000539250 SP7Q8TDD2 431 aaPredicted RBP12.62□□□□□ -0.39
CCAR1-210ENST00000539250 BAZ1AQ9NRL2 1556 aaPredicted RBP12.61□□□□□ -0.39
CCAR1-210ENST00000539250 NUBP1P53384 320 aa12.61□□□□□ -0.39
CCAR1-210ENST00000539250 RASEFQ8IZ41 740 aa12.6□□□□□ -0.39
CCAR1-210ENST00000539250 HMGXB3Q12766 1538 aa12.59□□□□□ -0.39
CCAR1-210ENST00000539250 KLHL34Q8N239 644 aa12.58□□□□□ -0.4
CCAR1-210ENST00000539250 ZRANB1Q9UGI0 708 aa12.58□□□□□ -0.4
CCAR1-210ENST00000539250 PEG3Q9GZU2 1588 aa12.56□□□□□ -0.4
CCAR1-210ENST00000539250 TSPYL2Q9H2G4 693 aaPredicted RBP12.55□□□□□ -0.4
CCAR1-210ENST00000539250 ZNF579Q8NAF0 562 aaKnown RBP12.53□□□□□ -0.4
CCAR1-210ENST00000539250 PAK3O75914 559 aaPredicted RBP12.52□□□□□ -0.41
CCAR1-210ENST00000539250 BAZ1BQ9UIG0 1483 aaKnown RBP12.5□□□□□ -0.41
CCAR1-210ENST00000539250 MROH2BQ7Z745 1585 aa12.5□□□□□ -0.41
CCAR1-210ENST00000539250 PHF12Q96QT6 1004 aa12.49□□□□□ -0.41
CCAR1-210ENST00000539250 CCDC61Q9Y6R9 512 aa12.48□□□□□ -0.41
CCAR1-210ENST00000539250 GABBR2O75899 941 aa12.47□□□□□ -0.41
CCAR1-210ENST00000539250 SPOCK2Q92563 424 aa12.47□□□□□ -0.41
CCAR1-210ENST00000539250 FAM212AQ96EL1 285 aa12.43□□□□□ -0.42
CCAR1-210ENST00000539250 DCAF8Q5TAQ9 597 aa12.41□□□□□ -0.42
CCAR1-210ENST00000539250 ERCC6Q03468 1493 aa12.4□□□□□ -0.42
CCAR1-210ENST00000539250 CUX2O14529 1486 aa12.4□□□□□ -0.43
CCAR1-210ENST00000539250 NESP48681 1621 aa12.38□□□□□ -0.43
CCAR1-210ENST00000539250 LAMC3Q9Y6N6 1575 aa12.38□□□□□ -0.43
CCAR1-210ENST00000539250 GALR2O43603 387 aaPredicted RBP12.37□□□□□ -0.43
CCAR1-210ENST00000539250 KIF12Q96FN5 646 aa12.37□□□□□ -0.43
CCAR1-210ENST00000539250 WIZO95785 1651 aa12.36□□□□□ -0.43
CCAR1-210ENST00000539250 CLCN6P51797 869 aa12.35□□□□□ -0.43
CCAR1-210ENST00000539250 GSE1Q14687 1217 aa12.34□□□□□ -0.43
CCAR1-210ENST00000539250 MAP3K13O43283 966 aa12.33□□□□□ -0.44
CCAR1-210ENST00000539250 MS4A3Q96HJ5 214 aa12.33□□□□□ -0.44
CCAR1-210ENST00000539250 PYGBP11216 843 aa12.31□□□□□ -0.44
CCAR1-210ENST00000539250 CIZ1Q9ULV3 898 aaPredicted RBP12.31□□□□□ -0.44
CCAR1-210ENST00000539250 RSF1Q96T23 1441 aaPredicted RBP12.28□□□□□ -0.44
CCAR1-210ENST00000539250 KIF21AQ7Z4S6 1674 aa12.28□□□□□ -0.44
CCAR1-210ENST00000539250 PDS5BQ9NTI5 1447 aa12.28□□□□□ -0.44
CCAR1-210ENST00000539250 THOC2Q8NI27 1593 aaKnown RBP12.27□□□□□ -0.44
CCAR1-210ENST00000539250 CADPSQ9ULU8 1353 aa12.27□□□□□ -0.45
CCAR1-210ENST00000539250 POTEIP0CG38 1075 aa12.26□□□□□ -0.45
CCAR1-210ENST00000539250 TRPC6Q9Y210 931 aa12.24□□□□□ -0.45
CCAR1-210ENST00000539250 PCDHB13Q9Y5F0 798 aa12.24□□□□□ -0.45
CCAR1-210ENST00000539250 CHRM1P11229 460 aaPredicted RBP12.23□□□□□ -0.45
CCAR1-210ENST00000539250 SGIP1Q9BQI5 828 aa12.23□□□□□ -0.45
CCAR1-210ENST00000539250 DNAJC5Q9H3Z4 198 aa12.23□□□□□ -0.45
CCAR1-210ENST00000539250 TOP2AP11388 1531 aaKnown RBP12.22□□□□□ -0.45
CCAR1-210ENST00000539250 IFNL1Q8IU54 200 aa12.22□□□□□ -0.45
CCAR1-210ENST00000539250 DCBLD2Q96PD2 775 aa12.18□□□□□ -0.46
CCAR1-210ENST00000539250 PCDHB8Q9UN66 801 aa12.18□□□□□ -0.46
CCAR1-210ENST00000539250 CFTRP13569 1480 aa12.16□□□□□ -0.46
CCAR1-210ENST00000539250 MRC2Q9UBG0 1479 aa12.15□□□□□ -0.46
CCAR1-210ENST00000539250 PKD2Q13563 968 aa12.15□□□□□ -0.46
CCAR1-210ENST00000539250 TRIM41Q8WV44 630 aa12.14□□□□□ -0.47
CCAR1-210ENST00000539250 BMP2KQ9NSY1 1161 aaPredicted RBP12.14□□□□□ -0.47
CCAR1-210ENST00000539250 PRDM2Q13029 1718 aa12.14□□□□□ -0.47
CCAR1-210ENST00000539250 WDR62O43379 1518 aa12.13□□□□□ -0.47
CCAR1-210ENST00000539250 ATMINO43313 823 aaPredicted RBP12.12□□□□□ -0.47
CCAR1-210ENST00000539250 ASTLQ6HA08 431 aaPredicted RBP12.12□□□□□ -0.47
CCAR1-210ENST00000539250 PELP1Q8IZL8 1130 aaKnown RBP12.12□□□□□ -0.47
CCAR1-210ENST00000539250 FANCD2Q9BXW9 1451 aa12.12□□□□□ -0.47
CCAR1-210ENST00000539250 CEP164Q9UPV0 1460 aa12.12□□□□□ -0.47
CCAR1-210ENST00000539250 TIE1P35590 1138 aa12.1□□□□□ -0.47
CCAR1-210ENST00000539250 ZNF467Q7Z7K2 595 aaPredicted RBP12.09□□□□□ -0.47
CCAR1-210ENST00000539250 RNF25Q96BH1 459 aaPredicted RBP12.09□□□□□ -0.47
CCAR1-210ENST00000539250 TTLL13PA6NNM8 815 aa12.08□□□□□ -0.48
CCAR1-210ENST00000539250 ATN1P54259 1190 aaPredicted RBP12.08□□□□□ -0.48
CCAR1-210ENST00000539250 CCDC88BA6NC98 1476 aa12.07□□□□□ -0.48
CCAR1-210ENST00000539250 ECM2O94769 699 aaPredicted RBP12.06□□□□□ -0.48
CCAR1-210ENST00000539250 TMEM106CQ9BVX2 250 aa12.04□□□□□ -0.48
CCAR1-210ENST00000539250 PSEN1P49768 467 aa12.01□□□□□ -0.49
CCAR1-210ENST00000539250 URB2Q14146 1524 aaKnown RBP12.01□□□□□ -0.49
CCAR1-210ENST00000539250 RIOK3O14730 519 aaKnown RBP12□□□□□ -0.49
CCAR1-210ENST00000539250 RGL2O15211 777 aa12□□□□□ -0.49
CCAR1-210ENST00000539250 PDAP1Q13442 181 aaKnown RBP11.99□□□□□ -0.49
CCAR1-210ENST00000539250 TRIM35Q9UPQ4 493 aa11.98□□□□□ -0.49
CCAR1-210ENST00000539250 SLC39A7Q92504 469 aa11.94□□□□□ -0.5
CCAR1-210ENST00000539250 ABCC8Q09428 1581 aa11.93□□□□□ -0.5
CCAR1-210ENST00000539250 METRNQ9UJH8 293 aa11.93□□□□□ -0.5
CCAR1-210ENST00000539250 VGFO15240 615 aaPredicted RBP11.92□□□□□ -0.5
CCAR1-210ENST00000539250 C7P10643 843 aa11.92□□□□□ -0.5
CCAR1-210ENST00000539250 TOPBP1Q92547 1522 aa11.91□□□□□ -0.5
CCAR1-210ENST00000539250 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.91□□□□□ -0.5
CCAR1-210ENST00000539250 POTEFA5A3E0 1075 aa11.91□□□□□ -0.5
CCAR1-210ENST00000539250 ZFP91Q96JP5 570 aaPredicted RBP11.91□□□□□ -0.5
CCAR1-210ENST00000539250 DNMBPQ6XZF7 1577 aa11.89□□□□□ -0.51
CCAR1-210ENST00000539250 IFT140Q96RY7 1462 aa11.89□□□□□ -0.51
CCAR1-210ENST00000539250 POTEB2H3BUK9 544 aa11.88□□□□□ -0.51
CCAR1-210ENST00000539250 IER5LQ5T953 404 aa11.87□□□□□ -0.51
CCAR1-210ENST00000539250 COLQQ9Y215 455 aaPredicted RBP11.87□□□□□ -0.51
CCAR1-210ENST00000539250 CABP2Q9NPB3 220 aa11.86□□□□□ -0.51
CCAR1-210ENST00000539250 RTN4Q9NQC3 1192 aaKnown RBP11.85□□□□□ -0.51
CCAR1-210ENST00000539250 IRX5P78411 483 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms