RNA–Protein interactions for RNA: ENST00000539170.5

GABARAPL1-205, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 3 BASIC

Gene GABARAPL1, Length 1,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-205ENST00000539170 RANGAP1P46060 587 aaPredicted RBP26.14■■□□□ 1.78
GABARAPL1-205ENST00000539170 EFCAB5A4FU69 1503 aa26.08■■□□□ 1.77
GABARAPL1-205ENST00000539170 SNAPC4Q5SXM2 1469 aa26.05■■□□□ 1.76
GABARAPL1-205ENST00000539170 MAGI1Q96QZ7 1491 aaPredicted RBP26.03■■□□□ 1.76
GABARAPL1-205ENST00000539170 PPARGC1BQ86YN6 1023 aaKnown RBP26■■□□□ 1.75
GABARAPL1-205ENST00000539170 SAMD9Q5K651 1589 aa25.96■■□□□ 1.75
GABARAPL1-205ENST00000539170 GRIN2AQ12879 1464 aa25.93■■□□□ 1.74
GABARAPL1-205ENST00000539170 IQGAP2Q13576 1575 aa25.93■■□□□ 1.74
GABARAPL1-205ENST00000539170 SYNJ2O15056 1496 aa25.91■■□□□ 1.74
GABARAPL1-205ENST00000539170 APLP2Q06481 763 aa25.9■■□□□ 1.74
GABARAPL1-205ENST00000539170 DNAJC5Q9H3Z4 198 aa25.9■■□□□ 1.74
GABARAPL1-205ENST00000539170 FHOD3Q2V2M9 1422 aa25.87■■□□□ 1.73
GABARAPL1-205ENST00000539170 MAP3K1Q13233 1512 aa25.83■■□□□ 1.73
GABARAPL1-205ENST00000539170 KIAA0586Q9BVV6 1533 aa25.83■■□□□ 1.73
GABARAPL1-205ENST00000539170 PCF11O94913 1555 aaKnown RBP25.82■■□□□ 1.72
GABARAPL1-205ENST00000539170 UGGT2Q9NYU1 1516 aa25.81■■□□□ 1.72
GABARAPL1-205ENST00000539170 FMN1Q68DA7 1419 aa25.79■■□□□ 1.72
GABARAPL1-205ENST00000539170 FYCO1Q9BQS8 1478 aa25.79■■□□□ 1.72
GABARAPL1-205ENST00000539170 P3H3Q8IVL6 736 aa25.77■■□□□ 1.72
GABARAPL1-205ENST00000539170 TIAM1Q13009 1591 aa25.77■■□□□ 1.72
GABARAPL1-205ENST00000539170 CEP170Q5SW79 1584 aa25.77■■□□□ 1.72
GABARAPL1-205ENST00000539170 TTBK1Q5TCY1 1321 aaPredicted RBP25.77■■□□□ 1.72
GABARAPL1-205ENST00000539170 CASKIN1Q8WXD9 1431 aa25.76■■□□□ 1.71
GABARAPL1-205ENST00000539170 NUP160Q12769 1436 aa25.75■■□□□ 1.71
GABARAPL1-205ENST00000539170 CHMP7Q8WUX9 453 aaPredicted RBP25.75■■□□□ 1.71
GABARAPL1-205ENST00000539170 CFAP43Q8NDM7 1665 aa25.75■■□□□ 1.71
GABARAPL1-205ENST00000539170 KANK4Q5T7N3 995 aaPredicted RBP25.67■■□□□ 1.7
GABARAPL1-205ENST00000539170 KIAA0556O60303 1618 aa25.67■■□□□ 1.7
GABARAPL1-205ENST00000539170 DISP1Q96F81 1524 aa25.65■■□□□ 1.7
GABARAPL1-205ENST00000539170 CHD1O14646 1710 aa25.62■■□□□ 1.69
GABARAPL1-205ENST00000539170 LRRC9Q6ZRR7 1453 aa25.62■■□□□ 1.69
GABARAPL1-205ENST00000539170 FBLN2P98095 1184 aa25.62■■□□□ 1.69
GABARAPL1-205ENST00000539170 LRRIQ1Q96JM4 1722 aa25.58■■□□□ 1.69
GABARAPL1-205ENST00000539170 HRCP23327 699 aa25.57■■□□□ 1.68
GABARAPL1-205ENST00000539170 HECW1Q76N89 1606 aa25.55■■□□□ 1.68
GABARAPL1-205ENST00000539170 RRBP1Q9P2E9 1410 aaKnown RBP25.51■■□□□ 1.67
GABARAPL1-205ENST00000539170 CCDC18Q5T9S5 1454 aa25.5■■□□□ 1.67
GABARAPL1-205ENST00000539170 ATP1B4Q9UN42 357 aaPredicted RBP25.49■■□□□ 1.67
GABARAPL1-205ENST00000539170 CARMIL2Q6F5E8 1435 aa25.48■■□□□ 1.67
GABARAPL1-205ENST00000539170 JPH4Q96JJ6 628 aa25.47■■□□□ 1.67
GABARAPL1-205ENST00000539170 RAPGEF6Q8TEU7 1601 aa25.42■■□□□ 1.66
GABARAPL1-205ENST00000539170 SHROOM2Q13796 1616 aa25.42■■□□□ 1.66
GABARAPL1-205ENST00000539170 EPRSP07814 1512 aaKnown RBP25.42■■□□□ 1.66
GABARAPL1-205ENST00000539170 EHBP1L1Q8N3D4 1523 aa25.41■■□□□ 1.66
GABARAPL1-205ENST00000539170 CCNB3Q8WWL7 1395 aa25.37■■□□□ 1.65
GABARAPL1-205ENST00000539170 MTUS2Q5JR59 1369 aa25.37■■□□□ 1.65
GABARAPL1-205ENST00000539170 PHLDB1Q86UU1 1377 aa25.37■■□□□ 1.65
GABARAPL1-205ENST00000539170 NUP153P49790 1475 aaKnown RBP25.35■■□□□ 1.65
GABARAPL1-205ENST00000539170 CLASP1Q7Z460 1538 aa25.34■■□□□ 1.65
GABARAPL1-205ENST00000539170 SUPT6HQ7KZ85 1726 aaKnown RBP25.34■■□□□ 1.65
GABARAPL1-205ENST00000539170 CDK13Q14004 1512 aaKnown RBP25.33■■□□□ 1.65
GABARAPL1-205ENST00000539170 MAGI3Q5TCQ9 1506 aa25.33■■□□□ 1.65
GABARAPL1-205ENST00000539170 PRG4Q92954 1404 aaPredicted RBP25.33■■□□□ 1.65
GABARAPL1-205ENST00000539170 ARHGEF11O15085 1522 aa25.29■■□□□ 1.64
GABARAPL1-205ENST00000539170 ABCA8O94911 1581 aa25.29■■□□□ 1.64
GABARAPL1-205ENST00000539170 HNRNPUL2Q1KMD3 747 aaKnown RBP25.28■■□□□ 1.64
GABARAPL1-205ENST00000539170 PLB1Q6P1J6 1458 aa25.28■■□□□ 1.64
GABARAPL1-205ENST00000539170 NCOA2Q15596 1464 aa25.27■■□□□ 1.64
GABARAPL1-205ENST00000539170 ZEB1P37275 1124 aaPredicted RBP25.23■■□□□ 1.63
GABARAPL1-205ENST00000539170 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.22■■□□□ 1.63
GABARAPL1-205ENST00000539170 FGD6Q6ZV73 1430 aa25.2■■□□□ 1.63
GABARAPL1-205ENST00000539170 MYOM3Q5VTT5 1437 aa25.19■■□□□ 1.62
GABARAPL1-205ENST00000539170 PTPRGP23470 1445 aa25.18■■□□□ 1.62
GABARAPL1-205ENST00000539170 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.17■■□□□ 1.62
GABARAPL1-205ENST00000539170 ERCC6L2Q5T890 1561 aa25.15■■□□□ 1.62
GABARAPL1-205ENST00000539170 CDK11AQ9UQ88 783 aaPredicted RBP25.12■■□□□ 1.61
GABARAPL1-205ENST00000539170 CCER1Q8TC90 406 aaPredicted RBP25.12■■□□□ 1.61
GABARAPL1-205ENST00000539170 ADCY10Q96PN6 1610 aa25.11■■□□□ 1.61
GABARAPL1-205ENST00000539170 TROQ12816 1431 aaPredicted RBP25.11■■□□□ 1.61
GABARAPL1-205ENST00000539170 ARID3CA6NKF2 412 aa25.11■■□□□ 1.61
GABARAPL1-205ENST00000539170 PTPN23Q9H3S7 1636 aa25.08■■□□□ 1.61
GABARAPL1-205ENST00000539170 ATP10BO94823 1461 aa25.08■■□□□ 1.6
GABARAPL1-205ENST00000539170 FAM50AQ14320 339 aaKnown RBP25.07■■□□□ 1.6
GABARAPL1-205ENST00000539170 TCOF1Q13428 1488 aaKnown RBP25.06■■□□□ 1.6
GABARAPL1-205ENST00000539170 UACAQ9BZF9 1416 aa25.06■■□□□ 1.6
GABARAPL1-205ENST00000539170 OSCARQ8IYS5 282 aa25.06■■□□□ 1.6
GABARAPL1-205ENST00000539170 MIA2Q96PC5 1412 aa25.05■■□□□ 1.6
GABARAPL1-205ENST00000539170 ABCC2Q92887 1545 aa25.03■■□□□ 1.6
GABARAPL1-205ENST00000539170 ITGAEP38570 1179 aa25■■□□□ 1.59
GABARAPL1-205ENST00000539170 KIF14Q15058 1648 aa24.99■■□□□ 1.59
GABARAPL1-205ENST00000539170 ITSN2Q9NZM3 1697 aa24.98■■□□□ 1.59
GABARAPL1-205ENST00000539170 UHRF1BP1LA0JNW5 1464 aa24.97■■□□□ 1.59
GABARAPL1-205ENST00000539170 SETD5Q9C0A6 1442 aa24.93■■□□□ 1.58
GABARAPL1-205ENST00000539170 PLEKHD1A6NEE1 506 aa24.93■■□□□ 1.58
GABARAPL1-205ENST00000539170 ABCC10Q5T3U5 1492 aa24.9■■□□□ 1.58
GABARAPL1-205ENST00000539170 RAB3GAP2Q9H2M9 1393 aa24.9■■□□□ 1.58
GABARAPL1-205ENST00000539170 PTPRKQ15262 1439 aa24.9■■□□□ 1.58
GABARAPL1-205ENST00000539170 DHX57Q6P158 1386 aaKnown RBP24.89■■□□□ 1.57
GABARAPL1-205ENST00000539170 GPATCH8Q9UKJ3 1502 aaKnown RBP24.89■■□□□ 1.57
GABARAPL1-205ENST00000539170 CDC42BPAQ5VT25 1732 aa24.86■■□□□ 1.57
GABARAPL1-205ENST00000539170 KDM5BQ9UGL1 1544 aa24.86■■□□□ 1.57
GABARAPL1-205ENST00000539170 ZCCHC11Q5TAX3 1644 aaKnown RBP24.86■■□□□ 1.57
GABARAPL1-205ENST00000539170 CLSPNQ9HAW4 1339 aa24.84■■□□□ 1.57
GABARAPL1-205ENST00000539170 HFM1A2PYH4 1435 aa24.84■■□□□ 1.57
GABARAPL1-205ENST00000539170 DNMT1P26358 1616 aaKnown RBP24.83■■□□□ 1.57
GABARAPL1-205ENST00000539170 AKNAQ7Z591 1439 aa24.81■■□□□ 1.56
GABARAPL1-205ENST00000539170 CAMSAP2Q08AD1 1489 aa24.8■■□□□ 1.56
GABARAPL1-205ENST00000539170 GCC2Q8IWJ2 1684 aa24.79■■□□□ 1.56
GABARAPL1-205ENST00000539170 DAPK1P53355 1430 aa24.77■■□□□ 1.56
GABARAPL1-205ENST00000539170 CFDP1Q9UEE9 299 aaPredicted RBP24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms