RNA–Protein interactions for RNA: ENST00000539168.1

CDH5-202, Transcript of cadherin 5, humanhuman

TSL 2 BASIC

Gene CDH5, Length 1,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-202ENST00000539168 MAGI1Q96QZ7 1491 aaPredicted RBP31.66■■■□□ 2.66
CDH5-202ENST00000539168 EFCAB5A4FU69 1503 aa31.65■■■□□ 2.66
CDH5-202ENST00000539168 PCGF6Q9BYE7 350 aa31.64■■■□□ 2.66
CDH5-202ENST00000539168 SNAPC4Q5SXM2 1469 aa31.61■■■□□ 2.65
CDH5-202ENST00000539168 APLP2Q06481 763 aa31.59■■■□□ 2.65
CDH5-202ENST00000539168 SYNJ2O15056 1496 aa31.5■■■□□ 2.63
CDH5-202ENST00000539168 GRIN2AQ12879 1464 aa31.48■■■□□ 2.63
CDH5-202ENST00000539168 IQGAP2Q13576 1575 aa31.45■■■□□ 2.63
CDH5-202ENST00000539168 SAMD9Q5K651 1589 aa31.44■■■□□ 2.62
CDH5-202ENST00000539168 KIAA0586Q9BVV6 1533 aa31.4■■■□□ 2.62
CDH5-202ENST00000539168 CHMP7Q8WUX9 453 aaPredicted RBP31.4■■■□□ 2.62
CDH5-202ENST00000539168 PPARGC1BQ86YN6 1023 aaKnown RBP31.39■■■□□ 2.62
CDH5-202ENST00000539168 FMN1Q68DA7 1419 aa31.37■■■□□ 2.61
CDH5-202ENST00000539168 MAP3K1Q13233 1512 aa31.36■■■□□ 2.61
CDH5-202ENST00000539168 FHOD3Q2V2M9 1422 aa31.33■■■□□ 2.61
CDH5-202ENST00000539168 UGGT2Q9NYU1 1516 aa31.32■■■□□ 2.61
CDH5-202ENST00000539168 NUP160Q12769 1436 aa31.27■■■□□ 2.6
CDH5-202ENST00000539168 FYCO1Q9BQS8 1478 aa31.27■■■□□ 2.6
CDH5-202ENST00000539168 P3H3Q8IVL6 736 aa31.27■■■□□ 2.6
CDH5-202ENST00000539168 CASKIN1Q8WXD9 1431 aa31.26■■■□□ 2.59
CDH5-202ENST00000539168 PCF11O94913 1555 aaKnown RBP31.22■■■□□ 2.59
CDH5-202ENST00000539168 CEP170Q5SW79 1584 aa31.22■■■□□ 2.59
CDH5-202ENST00000539168 FBLN2P98095 1184 aa31.21■■■□□ 2.59
CDH5-202ENST00000539168 TIAM1Q13009 1591 aa31.19■■■□□ 2.58
CDH5-202ENST00000539168 TTBK1Q5TCY1 1321 aaPredicted RBP31.14■■■□□ 2.58
CDH5-202ENST00000539168 CFAP43Q8NDM7 1665 aa31.13■■■□□ 2.57
CDH5-202ENST00000539168 KIAA0556O60303 1618 aa31.11■■■□□ 2.57
CDH5-202ENST00000539168 DISP1Q96F81 1524 aa31.08■■■□□ 2.57
CDH5-202ENST00000539168 KANK4Q5T7N3 995 aaPredicted RBP31.06■■■□□ 2.56
CDH5-202ENST00000539168 LRRC9Q6ZRR7 1453 aa31.05■■■□□ 2.56
CDH5-202ENST00000539168 CARMIL2Q6F5E8 1435 aa31.05■■■□□ 2.56
CDH5-202ENST00000539168 CHD1O14646 1710 aa31.05■■■□□ 2.56
CDH5-202ENST00000539168 JPH4Q96JJ6 628 aa31.01■■■□□ 2.55
CDH5-202ENST00000539168 ATP1B4Q9UN42 357 aaPredicted RBP31.01■■■□□ 2.55
CDH5-202ENST00000539168 HECW1Q76N89 1606 aa31■■■□□ 2.55
CDH5-202ENST00000539168 CCDC18Q5T9S5 1454 aa30.99■■■□□ 2.55
CDH5-202ENST00000539168 RRBP1Q9P2E9 1410 aaKnown RBP30.89■■■□□ 2.54
CDH5-202ENST00000539168 HRCP23327 699 aa30.86■■■□□ 2.53
CDH5-202ENST00000539168 LRRIQ1Q96JM4 1722 aa30.84■■■□□ 2.53
CDH5-202ENST00000539168 MTUS2Q5JR59 1369 aa30.83■■■□□ 2.53
CDH5-202ENST00000539168 RAPGEF6Q8TEU7 1601 aa30.83■■■□□ 2.53
CDH5-202ENST00000539168 SHROOM2Q13796 1616 aa30.82■■■□□ 2.52
CDH5-202ENST00000539168 EPRSP07814 1512 aaKnown RBP30.82■■■□□ 2.52
CDH5-202ENST00000539168 EHBP1L1Q8N3D4 1523 aa30.81■■■□□ 2.52
CDH5-202ENST00000539168 PRG4Q92954 1404 aaPredicted RBP30.78■■■□□ 2.52
CDH5-202ENST00000539168 CCNB3Q8WWL7 1395 aa30.77■■■□□ 2.52
CDH5-202ENST00000539168 CLASP1Q7Z460 1538 aa30.74■■■□□ 2.51
CDH5-202ENST00000539168 SUPT6HQ7KZ85 1726 aaKnown RBP30.72■■■□□ 2.51
CDH5-202ENST00000539168 NUP153P49790 1475 aaKnown RBP30.71■■■□□ 2.51
CDH5-202ENST00000539168 PHLDB1Q86UU1 1377 aa30.69■■■□□ 2.5
CDH5-202ENST00000539168 ZEB1P37275 1124 aaPredicted RBP30.68■■■□□ 2.5
CDH5-202ENST00000539168 CDK11AQ9UQ88 783 aaPredicted RBP30.68■■■□□ 2.5
CDH5-202ENST00000539168 ABCA8O94911 1581 aa30.66■■■□□ 2.5
CDH5-202ENST00000539168 PTPRGP23470 1445 aa30.65■■■□□ 2.5
CDH5-202ENST00000539168 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.65■■■□□ 2.5
CDH5-202ENST00000539168 CDK13Q14004 1512 aaKnown RBP30.64■■■□□ 2.5
CDH5-202ENST00000539168 PLB1Q6P1J6 1458 aa30.64■■■□□ 2.49
CDH5-202ENST00000539168 NCOA2Q15596 1464 aa30.63■■■□□ 2.49
CDH5-202ENST00000539168 HNRNPUL2Q1KMD3 747 aaKnown RBP30.62■■■□□ 2.49
CDH5-202ENST00000539168 ARHGEF11O15085 1522 aa30.6■■■□□ 2.49
CDH5-202ENST00000539168 MAGI3Q5TCQ9 1506 aa30.6■■■□□ 2.49
CDH5-202ENST00000539168 MYOM3Q5VTT5 1437 aa30.56■■■□□ 2.48
CDH5-202ENST00000539168 FGD6Q6ZV73 1430 aa30.55■■■□□ 2.48
CDH5-202ENST00000539168 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.51■■■□□ 2.47
CDH5-202ENST00000539168 TROQ12816 1431 aaPredicted RBP30.49■■■□□ 2.47
CDH5-202ENST00000539168 UACAQ9BZF9 1416 aa30.49■■■□□ 2.47
CDH5-202ENST00000539168 CCER1Q8TC90 406 aaPredicted RBP30.46■■■□□ 2.47
CDH5-202ENST00000539168 FAM50AQ14320 339 aaKnown RBP30.46■■■□□ 2.47
CDH5-202ENST00000539168 MIA2Q96PC5 1412 aa30.45■■■□□ 2.47
CDH5-202ENST00000539168 ARID3CA6NKF2 412 aa30.44■■■□□ 2.46
CDH5-202ENST00000539168 OSCARQ8IYS5 282 aa30.44■■■□□ 2.46
CDH5-202ENST00000539168 ATP10BO94823 1461 aa30.43■■■□□ 2.46
CDH5-202ENST00000539168 ERCC6L2Q5T890 1561 aa30.42■■■□□ 2.46
CDH5-202ENST00000539168 ADCY10Q96PN6 1610 aa30.42■■■□□ 2.46
CDH5-202ENST00000539168 PLEKHD1A6NEE1 506 aa30.4■■■□□ 2.46
CDH5-202ENST00000539168 ABCC2Q92887 1545 aa30.39■■■□□ 2.46
CDH5-202ENST00000539168 TCOF1Q13428 1488 aaKnown RBP30.38■■■□□ 2.45
CDH5-202ENST00000539168 PTPN23Q9H3S7 1636 aa30.37■■■□□ 2.45
CDH5-202ENST00000539168 UHRF1BP1LA0JNW5 1464 aa30.37■■■□□ 2.45
CDH5-202ENST00000539168 ITGAEP38570 1179 aa30.31■■■□□ 2.44
CDH5-202ENST00000539168 KIF14Q15058 1648 aa30.3■■■□□ 2.44
CDH5-202ENST00000539168 ITSN2Q9NZM3 1697 aa30.3■■■□□ 2.44
CDH5-202ENST00000539168 SETD5Q9C0A6 1442 aa30.25■■■□□ 2.43
CDH5-202ENST00000539168 CLSPNQ9HAW4 1339 aa30.21■■■□□ 2.43
CDH5-202ENST00000539168 KDM5BQ9UGL1 1544 aa30.2■■■□□ 2.42
CDH5-202ENST00000539168 GPATCH8Q9UKJ3 1502 aaKnown RBP30.18■■■□□ 2.42
CDH5-202ENST00000539168 ABCC10Q5T3U5 1492 aa30.18■■■□□ 2.42
CDH5-202ENST00000539168 RAB3GAP2Q9H2M9 1393 aa30.15■■■□□ 2.42
CDH5-202ENST00000539168 CFDP1Q9UEE9 299 aaPredicted RBP30.14■■■□□ 2.41
CDH5-202ENST00000539168 ZCCHC11Q5TAX3 1644 aaKnown RBP30.13■■■□□ 2.41
CDH5-202ENST00000539168 HFM1A2PYH4 1435 aa30.12■■■□□ 2.41
CDH5-202ENST00000539168 AKNAQ7Z591 1439 aa30.12■■■□□ 2.41
CDH5-202ENST00000539168 DHX57Q6P158 1386 aaKnown RBP30.09■■■□□ 2.41
CDH5-202ENST00000539168 CDC42BPAQ5VT25 1732 aa30.08■■■□□ 2.41
CDH5-202ENST00000539168 PTPRKQ15262 1439 aa30.08■■■□□ 2.41
CDH5-202ENST00000539168 DNMT1P26358 1616 aaKnown RBP30.07■■■□□ 2.4
CDH5-202ENST00000539168 CAMSAP2Q08AD1 1489 aa30.06■■■□□ 2.4
CDH5-202ENST00000539168 ACIN1Q9UKV3 1341 aaKnown RBP30.05■■■□□ 2.4
CDH5-202ENST00000539168 DAPK1P53355 1430 aa30.04■■■□□ 2.4
CDH5-202ENST00000539168 ROCK1Q13464 1354 aa30.01■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms