RNA–Protein interactions for RNA: ENST00000537320.5

TNC-211, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 4,946 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-211ENST00000537320 CANXP27824 592 aaKnown RBP15.56■□□□□ 0.08
TNC-211ENST00000537320 CFDP1Q9UEE9 299 aaPredicted RBP15.56■□□□□ 0.08
TNC-211ENST00000537320 HNRNPUQ00839 825 aaKnown RBP eCLIP15.55■□□□□ 0.08
TNC-211ENST00000537320 FAM9BQ8IZU0 186 aa15.55■□□□□ 0.08
TNC-211ENST00000537320 TOP2AP11388 1531 aaKnown RBP15.54■□□□□ 0.08
TNC-211ENST00000537320 SLC24A1O60721 1099 aa15.53■□□□□ 0.08
TNC-211ENST00000537320 MIER1Q8N108 512 aa15.49■□□□□ 0.07
TNC-211ENST00000537320 FHAD1B1AJZ9 1412 aa15.49■□□□□ 0.07
TNC-211ENST00000537320 EIF4G2P78344 907 aaKnown RBP eCLIP15.48■□□□□ 0.07
TNC-211ENST00000537320 ZBTB47Q9UFB7 747 aaPredicted RBP15.48■□□□□ 0.07
TNC-211ENST00000537320 RTL5Q5HYW3 569 aaPredicted RBP15.48■□□□□ 0.07
TNC-211ENST00000537320 EIF4G1Q04637 1599 aaKnown RBP15.47■□□□□ 0.07
TNC-211ENST00000537320 TMC1Q8TDI8 760 aa15.47■□□□□ 0.07
TNC-211ENST00000537320 SALL2Q9Y467 1007 aaPredicted RBP15.46■□□□□ 0.07
TNC-211ENST00000537320 FKBP8Q14318 412 aa15.46■□□□□ 0.06
TNC-211ENST00000537320 BCL11AQ9H165 835 aa15.46■□□□□ 0.06
TNC-211ENST00000537320 PDS5BQ9NTI5 1447 aa15.45■□□□□ 0.06
TNC-211ENST00000537320 ATAD2BQ9ULI0 1458 aa15.45■□□□□ 0.06
TNC-211ENST00000537320 CCNB3Q8WWL7 1395 aa15.44■□□□□ 0.06
TNC-211ENST00000537320 RGL3Q3MIN7 710 aa15.44■□□□□ 0.06
TNC-211ENST00000537320 MRS2Q9HD23 443 aa15.43■□□□□ 0.06
TNC-211ENST00000537320 TDRD9Q8NDG6 1382 aaKnown RBP15.43■□□□□ 0.06
TNC-211ENST00000537320 VPS8Q8N3P4 1428 aa15.43■□□□□ 0.06
TNC-211ENST00000537320 SMARCA4P51532 1647 aa15.42■□□□□ 0.06
TNC-211ENST00000537320 CADPSQ9ULU8 1353 aa15.41■□□□□ 0.06
TNC-211ENST00000537320 SIN3AQ96ST3 1273 aa15.41■□□□□ 0.06
TNC-211ENST00000537320 KANK4Q5T7N3 995 aaPredicted RBP15.39■□□□□ 0.05
TNC-211ENST00000537320 SENP3Q9H4L4 574 aaPredicted RBP15.39■□□□□ 0.05
TNC-211ENST00000537320 WDR43Q15061 677 aaKnown RBP eCLIP15.34■□□□□ 0.05
TNC-211ENST00000537320 CARD11Q9BXL7 1154 aa15.29■□□□□ 0.04
TNC-211ENST00000537320 PPP1R15AO75807 674 aaPredicted RBP15.29■□□□□ 0.04
TNC-211ENST00000537320 ARHGAP35Q9NRY4 1499 aa15.28■□□□□ 0.04
TNC-211ENST00000537320 RAPGEF2Q9Y4G8 1499 aa15.26■□□□□ 0.03
TNC-211ENST00000537320 ANP32AP39687 249 aaKnown RBP15.25■□□□□ 0.03
TNC-211ENST00000537320 NPM2Q86SE8 214 aaKnown RBP15.25■□□□□ 0.03
TNC-211ENST00000537320 FMN1Q68DA7 1419 aa15.25■□□□□ 0.03
TNC-211ENST00000537320 CARMIL2Q6F5E8 1435 aa15.25■□□□□ 0.03
TNC-211ENST00000537320 RUSC2Q8N2Y8 1516 aa15.25■□□□□ 0.03
TNC-211ENST00000537320 SETD5Q9C0A6 1442 aa15.24■□□□□ 0.03
TNC-211ENST00000537320 ARID4BQ4LE39 1312 aaPredicted RBP15.24■□□□□ 0.03
TNC-211ENST00000537320 CCDC136Q96JN2 1154 aa15.22■□□□□ 0.03
TNC-211ENST00000537320 IRX6P78412 446 aaPredicted RBP15.22■□□□□ 0.03
TNC-211ENST00000537320 FHOD3Q2V2M9 1422 aa15.21■□□□□ 0.02
TNC-211ENST00000537320 FANCD2Q9BXW9 1451 aa15.2■□□□□ 0.02
TNC-211ENST00000537320 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.2■□□□□ 0.02
TNC-211ENST00000537320 CDCA8Q53HL2 280 aa15.19■□□□□ 0.02
TNC-211ENST00000537320 SENP3-EIF4A1A0A087X0R7 540 aa15.18■□□□□ 0.02
TNC-211ENST00000537320 SCAF1Q9H7N4 1312 aaKnown RBP15.18■□□□□ 0.02
TNC-211ENST00000537320 KNSTRNQ9Y448 316 aa15.18■□□□□ 0.02
TNC-211ENST00000537320 DCAF11Q8TEB1 546 aa15.17■□□□□ 0.02
TNC-211ENST00000537320 TIMELESSQ9UNS1 1208 aa15.17■□□□□ 0.02
TNC-211ENST00000537320 RAB3GAP2Q9H2M9 1393 aa15.15■□□□□ 0.02
TNC-211ENST00000537320 FOXD1Q16676 465 aa15.15■□□□□ 0.02
TNC-211ENST00000537320 PKD2Q13563 968 aa15.13■□□□□ 0.01
TNC-211ENST00000537320 PLEKHG5O94827 1062 aa15.11■□□□□ 0.01
TNC-211ENST00000537320 JPH4Q96JJ6 628 aa15.11■□□□□ 0.01
TNC-211ENST00000537320 C14orf37Q86TY3 774 aa15.11■□□□□ 0.01
TNC-211ENST00000537320 KANK1Q14678 1352 aa15.11■□□□□ 0.01
TNC-211ENST00000537320 MPHOSPH9Q99550 1183 aa15.09■□□□□ 0.01
TNC-211ENST00000537320 EFCAB2Q5VUJ9 269 aa15.08■□□□□ 0.01
TNC-211ENST00000537320 CFAP53Q96M91 514 aa15.08■□□□□ 0.01
TNC-211ENST00000537320 POGKQ9P215 609 aa15.08■□□□□ 0
TNC-211ENST00000537320 UPF2Q9HAU5 1272 aaKnown RBP15.08■□□□□ 0
TNC-211ENST00000537320 NCAPD3P42695 1498 aa15.08■□□□□ 0
TNC-211ENST00000537320 ZBTB7CA1YPR0 619 aa15.07■□□□□ 0
TNC-211ENST00000537320 GGT6Q6P531 493 aa15.07■□□□□ 0
TNC-211ENST00000537320 MLECQ14165 292 aa15.06■□□□□ 0
TNC-211ENST00000537320 FGD5Q6ZNL6 1462 aa15.06■□□□□ 0
TNC-211ENST00000537320 PPM1GO15355 546 aaPredicted RBP15.06■□□□□ 0
TNC-211ENST00000537320 HSPA5P11021 654 aaKnown RBP15.05■□□□□ 0
TNC-211ENST00000537320 NUP155O75694 1391 aa15.05■□□□□ 0
TNC-211ENST00000537320 ANKRD30AQ9BXX3 1397 aa15.05■□□□□ -0
TNC-211ENST00000537320 CC2D1BQ5T0F9 858 aaKnown RBP15.05■□□□□ -0
TNC-211ENST00000537320 IGF1RP08069 1367 aa15.04■□□□□ -0
TNC-211ENST00000537320 TMF1P82094 1093 aa15.04■□□□□ -0
TNC-211ENST00000537320 SUPT16HQ9Y5B9 1047 aaKnown RBP15.04■□□□□ -0
TNC-211ENST00000537320 HNRNPMP52272 730 aaKnown RBP eCLIP15.04■□□□□ -0
TNC-211ENST00000537320 RAD54L2Q9Y4B4 1467 aa15.02■□□□□ -0
TNC-211ENST00000537320 CCDC18Q5T9S5 1454 aa15.02□□□□□ -0.01
TNC-211ENST00000537320 HSP90AA1P07900 732 aaKnown RBP15.02□□□□□ -0.01
TNC-211ENST00000537320 TNNT2P45379 298 aaPredicted RBP15.02□□□□□ -0.01
TNC-211ENST00000537320 NEUROD2Q15784 382 aa15.01□□□□□ -0.01
TNC-211ENST00000537320 TRHP20396 242 aaPredicted RBP15□□□□□ -0.01
TNC-211ENST00000537320 GAPVD1Q14C86 1478 aa14.99□□□□□ -0.01
TNC-211ENST00000537320 KIF3BO15066 747 aa14.95□□□□□ -0.02
TNC-211ENST00000537320 SAFB2Q14151 953 aaKnown RBP eCLIP14.95□□□□□ -0.02
TNC-211ENST00000537320 MYH16Q9H6N6 1097 aa14.95□□□□□ -0.02
TNC-211ENST00000537320 NUDCQ9Y266 331 aa14.95□□□□□ -0.02
TNC-211ENST00000537320 L3MBTL2Q969R5 705 aa14.95□□□□□ -0.02
TNC-211ENST00000537320 RSPH4AQ5TD94 716 aa14.94□□□□□ -0.02
TNC-211ENST00000537320 MAPK8IP3Q9UPT6 1336 aa14.94□□□□□ -0.02
TNC-211ENST00000537320 A0A0G2JS52 829 aa14.93□□□□□ -0.02
TNC-211ENST00000537320 CCER2I3L3R5 266 aa14.93□□□□□ -0.02
TNC-211ENST00000537320 SPAG9O60271 1321 aaKnown RBP14.93□□□□□ -0.02
TNC-211ENST00000537320 SRPK2P78362 688 aaKnown RBP14.92□□□□□ -0.02
TNC-211ENST00000537320 PTPRGP23470 1445 aa14.92□□□□□ -0.02
TNC-211ENST00000537320 ROCK2O75116 1388 aaKnown RBP14.91□□□□□ -0.02
TNC-211ENST00000537320 U2SURPO15042 1029 aaKnown RBP14.91□□□□□ -0.02
TNC-211ENST00000537320 HDGFP51858 240 aaKnown RBP14.91□□□□□ -0.02
TNC-211ENST00000537320 STK26Q9P289 416 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms