RNA–Protein interactions for RNA: ENST00000537179.1

LPCAT3-206, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 1,135 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-206ENST00000537179 TSPOAP1O95153 1857 aa28.26■■■□□ 2.11
LPCAT3-206ENST00000537179 FHAD1B1AJZ9 1412 aa28.26■■■□□ 2.11
LPCAT3-206ENST00000537179 ADCY10Q96PN6 1610 aa28.21■■■□□ 2.11
LPCAT3-206ENST00000537179 ERICH3Q5RHP9 1530 aa28.16■■■□□ 2.1
LPCAT3-206ENST00000537179 RUSC2Q8N2Y8 1516 aa28.15■■■□□ 2.1
LPCAT3-206ENST00000537179 WRNQ14191 1432 aaPredicted RBP eCLIP28.15■■■□□ 2.1
LPCAT3-206ENST00000537179 BIVM-ERCC5R4GMW8 1640 aa28.1■■■□□ 2.09
LPCAT3-206ENST00000537179 NPM1P06748 294 aaKnown RBP eCLIP28.1■■■□□ 2.09
LPCAT3-206ENST00000537179 JPH4Q96JJ6 628 aa28.08■■■□□ 2.09
LPCAT3-206ENST00000537179 TOP2BQ02880 1626 aa28.04■■■□□ 2.08
LPCAT3-206ENST00000537179 ADGRL1O94910 1474 aa28.02■■■□□ 2.08
LPCAT3-206ENST00000537179 HECW2Q9P2P5 1572 aa28.02■■■□□ 2.08
LPCAT3-206ENST00000537179 PPRC1Q5VV67 1664 aaKnown RBP27.97■■■□□ 2.07
LPCAT3-206ENST00000537179 GLI2P10070 1586 aa27.8■■■□□ 2.04
LPCAT3-206ENST00000537179 KIAA0586Q9BVV6 1533 aa27.76■■■□□ 2.03
LPCAT3-206ENST00000537179 CUL7Q14999 1698 aa27.73■■■□□ 2.03
LPCAT3-206ENST00000537179 ABCC2Q92887 1545 aa27.72■■■□□ 2.03
LPCAT3-206ENST00000537179 COL17A1Q9UMD9 1497 aaPredicted RBP27.72■■■□□ 2.03
LPCAT3-206ENST00000537179 ASXL2Q76L83 1435 aa27.7■■■□□ 2.03
LPCAT3-206ENST00000537179 PLB1Q6P1J6 1458 aa27.69■■■□□ 2.02
LPCAT3-206ENST00000537179 MAP3K4Q9Y6R4 1608 aa27.67■■■□□ 2.02
LPCAT3-206ENST00000537179 PTPRGP23470 1445 aa27.66■■■□□ 2.02
LPCAT3-206ENST00000537179 FBXO41Q8TF61 875 aa27.59■■■□□ 2.01
LPCAT3-206ENST00000537179 TEX14Q8IWB6 1497 aa27.57■■■□□ 2
LPCAT3-206ENST00000537179 TTBK1Q5TCY1 1321 aaPredicted RBP27.56■■■□□ 2
LPCAT3-206ENST00000537179 EPRSP07814 1512 aaKnown RBP27.56■■■□□ 2
LPCAT3-206ENST00000537179 UHRF1BP1LA0JNW5 1464 aa27.54■■■□□ 2
LPCAT3-206ENST00000537179 TNIKQ9UKE5 1360 aa27.54■■■□□ 2
LPCAT3-206ENST00000537179 CARMIL2Q6F5E8 1435 aa27.49■■□□□ 1.99
LPCAT3-206ENST00000537179 ZCCHC11Q5TAX3 1644 aaKnown RBP27.47■■□□□ 1.99
LPCAT3-206ENST00000537179 IGF1RP08069 1367 aa27.46■■□□□ 1.99
LPCAT3-206ENST00000537179 KDM5BQ9UGL1 1544 aa27.45■■□□□ 1.98
LPCAT3-206ENST00000537179 UACAQ9BZF9 1416 aa27.44■■□□□ 1.98
LPCAT3-206ENST00000537179 IQGAP2Q13576 1575 aa27.43■■□□□ 1.98
LPCAT3-206ENST00000537179 KIF21BO75037 1637 aa27.41■■□□□ 1.98
LPCAT3-206ENST00000537179 KIF27Q86VH2 1401 aa27.36■■□□□ 1.97
LPCAT3-206ENST00000537179 DISP1Q96F81 1524 aa27.35■■□□□ 1.97
LPCAT3-206ENST00000537179 SUPT5HO00267 1087 aaKnown RBP27.34■■□□□ 1.97
LPCAT3-206ENST00000537179 CFAP43Q8NDM7 1665 aa27.3■■□□□ 1.96
LPCAT3-206ENST00000537179 WDR7Q9Y4E6 1490 aa27.29■■□□□ 1.96
LPCAT3-206ENST00000537179 CARMIL1Q5VZK9 1371 aa27.25■■□□□ 1.95
LPCAT3-206ENST00000537179 MAGI3Q5TCQ9 1506 aa27.25■■□□□ 1.95
LPCAT3-206ENST00000537179 LMTK3Q96Q04 1460 aa27.22■■□□□ 1.95
LPCAT3-206ENST00000537179 KIAA0556O60303 1618 aa27.22■■□□□ 1.95
LPCAT3-206ENST00000537179 ADAMTSL3P82987 1691 aa27.21■■□□□ 1.95
LPCAT3-206ENST00000537179 UGGT2Q9NYU1 1516 aa27.19■■□□□ 1.94
LPCAT3-206ENST00000537179 PTPRMP28827 1452 aa27.19■■□□□ 1.94
LPCAT3-206ENST00000537179 CD109Q6YHK3 1445 aa27.18■■□□□ 1.94
LPCAT3-206ENST00000537179 PCF11O94913 1555 aaKnown RBP27.14■■□□□ 1.94
LPCAT3-206ENST00000537179 ARAP3Q8WWN8 1544 aa27.07■■□□□ 1.92
LPCAT3-206ENST00000537179 BCORL1Q5H9F3 1711 aa27.06■■□□□ 1.92
LPCAT3-206ENST00000537179 MADDQ8WXG6 1647 aa27.05■■□□□ 1.92
LPCAT3-206ENST00000537179 ABCA8O94911 1581 aa27.01■■□□□ 1.92
LPCAT3-206ENST00000537179 KCNH8Q96L42 1107 aa26.99■■□□□ 1.91
LPCAT3-206ENST00000537179 CTTNBP2Q8WZ74 1663 aa26.95■■□□□ 1.91
LPCAT3-206ENST00000537179 RIMS1Q86UR5 1692 aaKnown RBP26.95■■□□□ 1.9
LPCAT3-206ENST00000537179 RAPGEF2Q9Y4G8 1499 aa26.93■■□□□ 1.9
LPCAT3-206ENST00000537179 FRMPD1Q5SYB0 1578 aa26.9■■□□□ 1.9
LPCAT3-206ENST00000537179 ILDR2Q71H61 639 aa26.9■■□□□ 1.9
LPCAT3-206ENST00000537179 ABCA9Q8IUA7 1624 aa26.89■■□□□ 1.9
LPCAT3-206ENST00000537179 SOCS7O14512 581 aa26.88■■□□□ 1.89
LPCAT3-206ENST00000537179 DISP3Q9P2K9 1392 aa26.84■■□□□ 1.89
LPCAT3-206ENST00000537179 GOLGA3Q08378 1498 aa26.82■■□□□ 1.88
LPCAT3-206ENST00000537179 CERKQ8TCT0 537 aa26.82■■□□□ 1.88
LPCAT3-206ENST00000537179 HSPA2P54652 639 aa26.81■■□□□ 1.88
LPCAT3-206ENST00000537179 PHLDB1Q86UU1 1377 aa26.81■■□□□ 1.88
LPCAT3-206ENST00000537179 ARHGEF40Q8TER5 1519 aa26.8■■□□□ 1.88
LPCAT3-206ENST00000537179 RAPGEF3O95398 923 aa26.8■■□□□ 1.88
LPCAT3-206ENST00000537179 NEO1Q92859 1461 aa26.77■■□□□ 1.88
LPCAT3-206ENST00000537179 ARID4BQ4LE39 1312 aaPredicted RBP26.77■■□□□ 1.88
LPCAT3-206ENST00000537179 SPATA31D1Q6ZQQ2 1576 aa26.73■■□□□ 1.87
LPCAT3-206ENST00000537179 RICTORQ6R327 1708 aa26.71■■□□□ 1.87
LPCAT3-206ENST00000537179 ATP10BO94823 1461 aa26.7■■□□□ 1.87
LPCAT3-206ENST00000537179 SIGLEC1Q9BZZ2 1709 aa26.7■■□□□ 1.86
LPCAT3-206ENST00000537179 ARID3CA6NKF2 412 aa26.67■■□□□ 1.86
LPCAT3-206ENST00000537179 FER1L4A9Z1Z3 1794 aa26.66■■□□□ 1.86
LPCAT3-206ENST00000537179 PLPPR3Q6T4P5 718 aa26.62■■□□□ 1.85
LPCAT3-206ENST00000537179 TTC37Q6PGP7 1564 aa26.61■■□□□ 1.85
LPCAT3-206ENST00000537179 FANCAO15360 1455 aa26.61■■□□□ 1.85
LPCAT3-206ENST00000537179 PREX1Q8TCU6 1659 aa26.59■■□□□ 1.85
LPCAT3-206ENST00000537179 POGZQ7Z3K3 1410 aa26.56■■□□□ 1.84
LPCAT3-206ENST00000537179 ZMYM4Q5VZL5 1548 aa26.56■■□□□ 1.84
LPCAT3-206ENST00000537179 STRCQ7RTU9 1775 aa26.56■■□□□ 1.84
LPCAT3-206ENST00000537179 DENND4BO75064 1496 aaPredicted RBP26.55■■□□□ 1.84
LPCAT3-206ENST00000537179 RAPGEF6Q8TEU7 1601 aa26.54■■□□□ 1.84
LPCAT3-206ENST00000537179 CFAP74Q9C0B2 1584 aa26.54■■□□□ 1.84
LPCAT3-206ENST00000537179 AKNAQ7Z591 1439 aa26.53■■□□□ 1.84
LPCAT3-206ENST00000537179 FHOD3Q2V2M9 1422 aa26.52■■□□□ 1.84
LPCAT3-206ENST00000537179 ZFYVE16Q7Z3T8 1539 aa26.52■■□□□ 1.84
LPCAT3-206ENST00000537179 EFCAB5A4FU69 1503 aa26.5■■□□□ 1.83
LPCAT3-206ENST00000537179 YEATS2Q9ULM3 1422 aa26.48■■□□□ 1.83
LPCAT3-206ENST00000537179 SAMD9Q5K651 1589 aa26.45■■□□□ 1.82
LPCAT3-206ENST00000537179 P3H3Q8IVL6 736 aa26.43■■□□□ 1.82
LPCAT3-206ENST00000537179 PRXQ9BXM0 1461 aa26.42■■□□□ 1.82
LPCAT3-206ENST00000537179 ARHGEF12Q9NZN5 1544 aa26.42■■□□□ 1.82
LPCAT3-206ENST00000537179 HECW1Q76N89 1606 aa26.42■■□□□ 1.82
LPCAT3-206ENST00000537179 MLECQ14165 292 aa26.4■■□□□ 1.82
LPCAT3-206ENST00000537179 FAM9AQ8IZU1 332 aaPredicted RBP26.4■■□□□ 1.82
LPCAT3-206ENST00000537179 NUP153P49790 1475 aaKnown RBP26.4■■□□□ 1.82
LPCAT3-206ENST00000537179 MAGI2Q86UL8 1455 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms