RNA–Protein interactions for RNA: ENST00000536876.5

LTBR-206, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-206ENST00000536876 ADCY10Q96PN6 1610 aa31.46■■■□□ 2.63
LTBR-206ENST00000536876 JPH4Q96JJ6 628 aa31.46■■■□□ 2.63
LTBR-206ENST00000536876 MAPKBP1O60336 1514 aa31.42■■■□□ 2.62
LTBR-206ENST00000536876 DIP2BQ9P265 1576 aa31.41■■■□□ 2.62
LTBR-206ENST00000536876 ABCC10Q5T3U5 1492 aa31.39■■■□□ 2.62
LTBR-206ENST00000536876 CUL7Q14999 1698 aa31.36■■■□□ 2.61
LTBR-206ENST00000536876 KIAA0586Q9BVV6 1533 aa31.31■■■□□ 2.6
LTBR-206ENST00000536876 IGF1RP08069 1367 aa31.28■■■□□ 2.6
LTBR-206ENST00000536876 FAM69CQ0P6D2 419 aa31.21■■■□□ 2.59
LTBR-206ENST00000536876 KIF27Q86VH2 1401 aa31.21■■■□□ 2.59
LTBR-206ENST00000536876 TSPOAP1O95153 1857 aa31.18■■■□□ 2.58
LTBR-206ENST00000536876 KDM6BO15054 1643 aa31.15■■■□□ 2.58
LTBR-206ENST00000536876 NPM1P06748 294 aaKnown RBP eCLIP31.1■■■□□ 2.57
LTBR-206ENST00000536876 PPRC1Q5VV67 1664 aaKnown RBP31.06■■■□□ 2.56
LTBR-206ENST00000536876 IQGAP2Q13576 1575 aa31.04■■■□□ 2.56
LTBR-206ENST00000536876 CARMIL1Q5VZK9 1371 aa31.02■■■□□ 2.56
LTBR-206ENST00000536876 PTPRGP23470 1445 aa31■■■□□ 2.55
LTBR-206ENST00000536876 ABCC2Q92887 1545 aa31■■■□□ 2.55
LTBR-206ENST00000536876 TNIKQ9UKE5 1360 aa30.95■■■□□ 2.55
LTBR-206ENST00000536876 DISP1Q96F81 1524 aa30.93■■■□□ 2.54
LTBR-206ENST00000536876 GLI2P10070 1586 aa30.93■■■□□ 2.54
LTBR-206ENST00000536876 UHRF1BP1LA0JNW5 1464 aa30.91■■■□□ 2.54
LTBR-206ENST00000536876 CARMIL2Q6F5E8 1435 aa30.9■■■□□ 2.54
LTBR-206ENST00000536876 KDM4FA0A1W2PPD8 638 aa30.9■■■□□ 2.54
LTBR-206ENST00000536876 ASXL2Q76L83 1435 aa30.9■■■□□ 2.54
LTBR-206ENST00000536876 TTBK1Q5TCY1 1321 aaPredicted RBP30.85■■■□□ 2.53
LTBR-206ENST00000536876 PLB1Q6P1J6 1458 aa30.84■■■□□ 2.53
LTBR-206ENST00000536876 UGGT2Q9NYU1 1516 aa30.83■■■□□ 2.53
LTBR-206ENST00000536876 MAP3K4Q9Y6R4 1608 aa30.82■■■□□ 2.52
LTBR-206ENST00000536876 UACAQ9BZF9 1416 aa30.81■■■□□ 2.52
LTBR-206ENST00000536876 KIAA0556O60303 1618 aa30.81■■■□□ 2.52
LTBR-206ENST00000536876 ZCCHC11Q5TAX3 1644 aaKnown RBP30.81■■■□□ 2.52
LTBR-206ENST00000536876 KDM5BQ9UGL1 1544 aa30.79■■■□□ 2.52
LTBR-206ENST00000536876 EPRSP07814 1512 aaKnown RBP30.76■■■□□ 2.51
LTBR-206ENST00000536876 RAPGEF2Q9Y4G8 1499 aa30.75■■■□□ 2.51
LTBR-206ENST00000536876 COL17A1Q9UMD9 1497 aaPredicted RBP30.73■■■□□ 2.51
LTBR-206ENST00000536876 CTTNBP2Q8WZ74 1663 aa30.71■■■□□ 2.51
LTBR-206ENST00000536876 ADGRL1O94910 1474 aa30.65■■■□□ 2.5
LTBR-206ENST00000536876 TEX14Q8IWB6 1497 aa30.57■■■□□ 2.48
LTBR-206ENST00000536876 WDR7Q9Y4E6 1490 aa30.57■■■□□ 2.48
LTBR-206ENST00000536876 ABCA8O94911 1581 aa30.54■■■□□ 2.48
LTBR-206ENST00000536876 CFAP43Q8NDM7 1665 aa30.49■■■□□ 2.47
LTBR-206ENST00000536876 GOLGA3Q08378 1498 aa30.42■■■□□ 2.46
LTBR-206ENST00000536876 PRXQ9BXM0 1461 aa30.42■■■□□ 2.46
LTBR-206ENST00000536876 MAGI3Q5TCQ9 1506 aa30.42■■■□□ 2.46
LTBR-206ENST00000536876 HECW2Q9P2P5 1572 aa30.4■■■□□ 2.46
LTBR-206ENST00000536876 CD109Q6YHK3 1445 aa30.33■■■□□ 2.45
LTBR-206ENST00000536876 KIF21BO75037 1637 aa30.31■■■□□ 2.44
LTBR-206ENST00000536876 ILDR1Q86SU0 546 aaPredicted RBP30.26■■■□□ 2.43
LTBR-206ENST00000536876 SAMD9Q5K651 1589 aa30.24■■■□□ 2.43
LTBR-206ENST00000536876 ABCA9Q8IUA7 1624 aa30.21■■■□□ 2.43
LTBR-206ENST00000536876 KCNH8Q96L42 1107 aa30.2■■■□□ 2.43
LTBR-206ENST00000536876 ATP10BO94823 1461 aa30.19■■■□□ 2.42
LTBR-206ENST00000536876 ARAP3Q8WWN8 1544 aa30.19■■■□□ 2.42
LTBR-206ENST00000536876 RAPGEF6Q8TEU7 1601 aa30.13■■■□□ 2.41
LTBR-206ENST00000536876 ARID3CA6NKF2 412 aa30.09■■■□□ 2.41
LTBR-206ENST00000536876 FRMPD1Q5SYB0 1578 aa30.09■■■□□ 2.41
LTBR-206ENST00000536876 ADAMTSL3P82987 1691 aa30.07■■■□□ 2.41
LTBR-206ENST00000536876 P3H3Q8IVL6 736 aa30.05■■■□□ 2.4
LTBR-206ENST00000536876 NUP153P49790 1475 aaKnown RBP30■■■□□ 2.39
LTBR-206ENST00000536876 NEO1Q92859 1461 aa29.97■■■□□ 2.39
LTBR-206ENST00000536876 BCORL1Q5H9F3 1711 aa29.96■■■□□ 2.39
LTBR-206ENST00000536876 PHLDB1Q86UU1 1377 aa29.93■■■□□ 2.38
LTBR-206ENST00000536876 PTPRMP28827 1452 aa29.92■■■□□ 2.38
LTBR-206ENST00000536876 RICTORQ6R327 1708 aa29.91■■■□□ 2.38
LTBR-206ENST00000536876 MADDQ8WXG6 1647 aa29.91■■■□□ 2.38
LTBR-206ENST00000536876 FHOD3Q2V2M9 1422 aa29.9■■■□□ 2.38
LTBR-206ENST00000536876 ARHGEF40Q8TER5 1519 aa29.9■■■□□ 2.38
LTBR-206ENST00000536876 RAPGEF3O95398 923 aa29.89■■■□□ 2.38
LTBR-206ENST00000536876 CSRNP3Q8WYN3 585 aa29.89■■■□□ 2.38
LTBR-206ENST00000536876 SIGLEC1Q9BZZ2 1709 aa29.83■■■□□ 2.37
LTBR-206ENST00000536876 TTC37Q6PGP7 1564 aa29.82■■■□□ 2.36
LTBR-206ENST00000536876 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.8■■■□□ 2.361e-6■■■■■ 27.4
LTBR-206ENST00000536876 EEA1Q15075 1411 aa29.79■■■□□ 2.36
LTBR-206ENST00000536876 RIMS1Q86UR5 1692 aaKnown RBP29.79■■■□□ 2.36
LTBR-206ENST00000536876 CFAP74Q9C0B2 1584 aa29.78■■■□□ 2.36
LTBR-206ENST00000536876 PCF11O94913 1555 aaKnown RBP29.77■■■□□ 2.36
LTBR-206ENST00000536876 FAM9AQ8IZU1 332 aaPredicted RBP29.76■■■□□ 2.35
LTBR-206ENST00000536876 EFCAB5A4FU69 1503 aa29.76■■■□□ 2.35
LTBR-206ENST00000536876 ZMYM4Q5VZL5 1548 aa29.75■■■□□ 2.35
LTBR-206ENST00000536876 LMTK3Q96Q04 1460 aa29.74■■■□□ 2.35
LTBR-206ENST00000536876 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.72■■■□□ 2.35
LTBR-206ENST00000536876 HNRNPUL2Q1KMD3 747 aaKnown RBP29.72■■■□□ 2.35
LTBR-206ENST00000536876 FANCAO15360 1455 aa29.72■■■□□ 2.35
LTBR-206ENST00000536876 DENND4BO75064 1496 aaPredicted RBP29.72■■■□□ 2.35
LTBR-206ENST00000536876 AKNAQ7Z591 1439 aa29.71■■■□□ 2.35
LTBR-206ENST00000536876 CDK13Q14004 1512 aaKnown RBP29.7■■■□□ 2.34
LTBR-206ENST00000536876 RANGAP1P46060 587 aaPredicted RBP29.69■■■□□ 2.34
LTBR-206ENST00000536876 ZFYVE16Q7Z3T8 1539 aa29.64■■■□□ 2.34
LTBR-206ENST00000536876 YEATS2Q9ULM3 1422 aa29.63■■■□□ 2.33
LTBR-206ENST00000536876 HECW1Q76N89 1606 aa29.62■■■□□ 2.33
LTBR-206ENST00000536876 ARID4BQ4LE39 1312 aaPredicted RBP29.6■■■□□ 2.33
LTBR-206ENST00000536876 PLEKHD1A6NEE1 506 aa29.59■■■□□ 2.33
LTBR-206ENST00000536876 FER1L4A9Z1Z3 1794 aa29.58■■■□□ 2.33
LTBR-206ENST00000536876 FBXO41Q8TF61 875 aa29.57■■■□□ 2.32
LTBR-206ENST00000536876 MYO5CQ9NQX4 1742 aa29.55■■■□□ 2.32
LTBR-206ENST00000536876 POGZQ7Z3K3 1410 aa29.54■■■□□ 2.32
LTBR-206ENST00000536876 MAGI2Q86UL8 1455 aa29.53■■■□□ 2.32
LTBR-206ENST00000536876 KIF14Q15058 1648 aa29.53■■■□□ 2.32
LTBR-206ENST00000536876 LRRIQ1Q96JM4 1722 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms