RNA–Protein interactions for RNA: ENST00000536400.5

PRKCH-202, Transcript of protein kinase C eta, humanhuman

TSL 2

Gene PRKCH, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-202ENST00000536400 PRG4Q92954 1404 aaPredicted RBP13.65□□□□□ -0.22
PRKCH-202ENST00000536400 ERICH3Q5RHP9 1530 aa13.64□□□□□ -0.23
PRKCH-202ENST00000536400 FAM69CQ0P6D2 419 aa13.64□□□□□ -0.23
PRKCH-202ENST00000536400 JPH4Q96JJ6 628 aa13.63□□□□□ -0.23
PRKCH-202ENST00000536400 BIVM-ERCC5R4GMW8 1640 aa13.63□□□□□ -0.23
PRKCH-202ENST00000536400 MAPKBP1O60336 1514 aa13.63□□□□□ -0.23
PRKCH-202ENST00000536400 TOP2BQ02880 1626 aa13.62□□□□□ -0.23
PRKCH-202ENST00000536400 KDM4FA0A1W2PPD8 638 aa13.61□□□□□ -0.23
PRKCH-202ENST00000536400 DIP2BQ9P265 1576 aa13.61□□□□□ -0.23
PRKCH-202ENST00000536400 NPM1P06748 294 aaKnown RBP eCLIP13.57□□□□□ -0.24
PRKCH-202ENST00000536400 RUSC2Q8N2Y8 1516 aa13.57□□□□□ -0.24
PRKCH-202ENST00000536400 KDM6BO15054 1643 aa13.57□□□□□ -0.24
PRKCH-202ENST00000536400 ADCY10Q96PN6 1610 aa13.57□□□□□ -0.24
PRKCH-202ENST00000536400 ILDR1Q86SU0 546 aaPredicted RBP13.54□□□□□ -0.24
PRKCH-202ENST00000536400 TSPOAP1O95153 1857 aa13.53□□□□□ -0.24
PRKCH-202ENST00000536400 KIAA0586Q9BVV6 1533 aa13.46□□□□□ -0.25
PRKCH-202ENST00000536400 SUPT5HO00267 1087 aaKnown RBP13.43□□□□□ -0.26
PRKCH-202ENST00000536400 PPRC1Q5VV67 1664 aaKnown RBP13.42□□□□□ -0.26
PRKCH-202ENST00000536400 IGF1RP08069 1367 aa13.4□□□□□ -0.26
PRKCH-202ENST00000536400 ADGRL1O94910 1474 aa13.4□□□□□ -0.26
PRKCH-202ENST00000536400 GLI2P10070 1586 aa13.4□□□□□ -0.26
PRKCH-202ENST00000536400 PTPRGP23470 1445 aa13.39□□□□□ -0.27
PRKCH-202ENST00000536400 ABCC2Q92887 1545 aa13.39□□□□□ -0.27
PRKCH-202ENST00000536400 ASXL2Q76L83 1435 aa13.37□□□□□ -0.27
PRKCH-202ENST00000536400 CUL7Q14999 1698 aa13.37□□□□□ -0.27
PRKCH-202ENST00000536400 PLB1Q6P1J6 1458 aa13.36□□□□□ -0.27
PRKCH-202ENST00000536400 COL17A1Q9UMD9 1497 aaPredicted RBP13.35□□□□□ -0.27
PRKCH-202ENST00000536400 TNIKQ9UKE5 1360 aa13.34□□□□□ -0.27
PRKCH-202ENST00000536400 HECW2Q9P2P5 1572 aa13.33□□□□□ -0.28
PRKCH-202ENST00000536400 KIF27Q86VH2 1401 aa13.33□□□□□ -0.28
PRKCH-202ENST00000536400 UHRF1BP1LA0JNW5 1464 aa13.33□□□□□ -0.28
PRKCH-202ENST00000536400 CARMIL2Q6F5E8 1435 aa13.32□□□□□ -0.28
PRKCH-202ENST00000536400 TTBK1Q5TCY1 1321 aaPredicted RBP13.31□□□□□ -0.28
PRKCH-202ENST00000536400 MAP3K4Q9Y6R4 1608 aa13.31□□□□□ -0.28
PRKCH-202ENST00000536400 EPRSP07814 1512 aaKnown RBP13.29□□□□□ -0.28
PRKCH-202ENST00000536400 UACAQ9BZF9 1416 aa13.29□□□□□ -0.28
PRKCH-202ENST00000536400 CARMIL1Q5VZK9 1371 aa13.28□□□□□ -0.28
PRKCH-202ENST00000536400 TEX14Q8IWB6 1497 aa13.28□□□□□ -0.28
PRKCH-202ENST00000536400 KDM5BQ9UGL1 1544 aa13.28□□□□□ -0.28
PRKCH-202ENST00000536400 IQGAP2Q13576 1575 aa13.27□□□□□ -0.29
PRKCH-202ENST00000536400 DISP1Q96F81 1524 aa13.25□□□□□ -0.29
PRKCH-202ENST00000536400 ZCCHC11Q5TAX3 1644 aaKnown RBP13.23□□□□□ -0.29
PRKCH-202ENST00000536400 UGGT2Q9NYU1 1516 aa13.19□□□□□ -0.3
PRKCH-202ENST00000536400 WDR7Q9Y4E6 1490 aa13.17□□□□□ -0.3
PRKCH-202ENST00000536400 KIAA0556O60303 1618 aa13.17□□□□□ -0.3
PRKCH-202ENST00000536400 FBXO41Q8TF61 875 aa13.16□□□□□ -0.3
PRKCH-202ENST00000536400 MAGI3Q5TCQ9 1506 aa13.16□□□□□ -0.3
PRKCH-202ENST00000536400 CFAP43Q8NDM7 1665 aa13.14□□□□□ -0.31
PRKCH-202ENST00000536400 CD109Q6YHK3 1445 aa13.13□□□□□ -0.31
PRKCH-202ENST00000536400 RAPGEF2Q9Y4G8 1499 aa13.12□□□□□ -0.31
PRKCH-202ENST00000536400 KIF21BO75037 1637 aa13.11□□□□□ -0.31
PRKCH-202ENST00000536400 ABCA8O94911 1581 aa13.08□□□□□ -0.32
PRKCH-202ENST00000536400 KCNH8Q96L42 1107 aa13.07□□□□□ -0.32
PRKCH-202ENST00000536400 ARAP3Q8WWN8 1544 aa13.07□□□□□ -0.32
PRKCH-202ENST00000536400 ADAMTSL3P82987 1691 aa13.05□□□□□ -0.32
PRKCH-202ENST00000536400 PTPRMP28827 1452 aa13.04□□□□□ -0.32
PRKCH-202ENST00000536400 CTTNBP2Q8WZ74 1663 aa13.03□□□□□ -0.32
PRKCH-202ENST00000536400 GOLGA3Q08378 1498 aa13.03□□□□□ -0.32
PRKCH-202ENST00000536400 PHLDB1Q86UU1 1377 aa13□□□□□ -0.33
PRKCH-202ENST00000536400 PCF11O94913 1555 aaKnown RBP12.98□□□□□ -0.33
PRKCH-202ENST00000536400 MSH5O43196 834 aa12.98□□□□□ -0.33
PRKCH-202ENST00000536400 BCORL1Q5H9F3 1711 aa12.98□□□□□ -0.33
PRKCH-202ENST00000536400 ABCA9Q8IUA7 1624 aa12.98□□□□□ -0.33
PRKCH-202ENST00000536400 LMTK3Q96Q04 1460 aa12.97□□□□□ -0.33
PRKCH-202ENST00000536400 ATP10BO94823 1461 aa12.97□□□□□ -0.33
PRKCH-202ENST00000536400 RAPGEF3O95398 923 aa12.96□□□□□ -0.33
PRKCH-202ENST00000536400 MADDQ8WXG6 1647 aa12.95□□□□□ -0.34
PRKCH-202ENST00000536400 NEO1Q92859 1461 aa12.94□□□□□ -0.34
PRKCH-202ENST00000536400 FRMPD1Q5SYB0 1578 aa12.94□□□□□ -0.34
PRKCH-202ENST00000536400 PRXQ9BXM0 1461 aa12.91□□□□□ -0.34
PRKCH-202ENST00000536400 ARID3CA6NKF2 412 aa12.91□□□□□ -0.34
PRKCH-202ENST00000536400 RIMS1Q86UR5 1692 aaKnown RBP12.89□□□□□ -0.35
PRKCH-202ENST00000536400 ARID4BQ4LE39 1312 aaPredicted RBP12.89□□□□□ -0.35
PRKCH-202ENST00000536400 ARHGEF40Q8TER5 1519 aa12.88□□□□□ -0.35
PRKCH-202ENST00000536400 ADRA2BP18089 450 aa12.87□□□□□ -0.35
PRKCH-202ENST00000536400 HSPA2P54652 639 aa12.87□□□□□ -0.35
PRKCH-202ENST00000536400 FAM9AQ8IZU1 332 aaPredicted RBP12.87□□□□□ -0.35
PRKCH-202ENST00000536400 RICTORQ6R327 1708 aa12.86□□□□□ -0.35
PRKCH-202ENST00000536400 P3H3Q8IVL6 736 aa12.86□□□□□ -0.35
PRKCH-202ENST00000536400 PIAS4Q8N2W9 510 aaPredicted RBP12.86□□□□□ -0.35
PRKCH-202ENST00000536400 RAPGEF6Q8TEU7 1601 aa12.85□□□□□ -0.35
PRKCH-202ENST00000536400 CERKQ8TCT0 537 aa12.85□□□□□ -0.35
PRKCH-202ENST00000536400 SAMD9Q5K651 1589 aa12.85□□□□□ -0.35
PRKCH-202ENST00000536400 PPP6R1Q9UPN7 881 aa12.84□□□□□ -0.35
PRKCH-202ENST00000536400 DENND4BO75064 1496 aaPredicted RBP12.84□□□□□ -0.35
PRKCH-202ENST00000536400 FHOD3Q2V2M9 1422 aa12.83□□□□□ -0.36
PRKCH-202ENST00000536400 SIGLEC1Q9BZZ2 1709 aa12.82□□□□□ -0.36
PRKCH-202ENST00000536400 POGZQ7Z3K3 1410 aa12.81□□□□□ -0.36
PRKCH-202ENST00000536400 AKNAQ7Z591 1439 aa12.81□□□□□ -0.36
PRKCH-202ENST00000536400 NUP153P49790 1475 aaKnown RBP12.81□□□□□ -0.36
PRKCH-202ENST00000536400 ZMYM4Q5VZL5 1548 aa12.81□□□□□ -0.36
PRKCH-202ENST00000536400 FANCAO15360 1455 aa12.8□□□□□ -0.36
PRKCH-202ENST00000536400 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.8□□□□□ -0.36
PRKCH-202ENST00000536400 HNRNPUL2Q1KMD3 747 aaKnown RBP12.8□□□□□ -0.36
PRKCH-202ENST00000536400 CFAP74Q9C0B2 1584 aa12.78□□□□□ -0.36
PRKCH-202ENST00000536400 ILDR2Q71H61 639 aa12.78□□□□□ -0.36
PRKCH-202ENST00000536400 POTEDQ86YR6 584 aa12.78□□□□□ -0.36
PRKCH-202ENST00000536400 YEATS2Q9ULM3 1422 aa12.78□□□□□ -0.36
PRKCH-202ENST00000536400 MAGI2Q86UL8 1455 aa12.78□□□□□ -0.36
PRKCH-202ENST00000536400 EFCAB5A4FU69 1503 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms