RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 RUSC2Q8N2Y8 1516 aa14.31□□□□□ -0.12
CHFR-211ENST00000535897 NPM1P06748 294 aaKnown RBP eCLIP14.3□□□□□ -0.12
CHFR-211ENST00000535897 FAM69CQ0P6D2 419 aa14.26□□□□□ -0.13
CHFR-211ENST00000535897 ABCC10Q5T3U5 1492 aa14.24□□□□□ -0.13
CHFR-211ENST00000535897 MAPKBP1O60336 1514 aa14.23□□□□□ -0.13
CHFR-211ENST00000535897 ADCY10Q96PN6 1610 aa14.23□□□□□ -0.13
CHFR-211ENST00000535897 DIP2BQ9P265 1576 aa14.22□□□□□ -0.13
CHFR-211ENST00000535897 KIAA0586Q9BVV6 1533 aa14.19□□□□□ -0.14
CHFR-211ENST00000535897 CUL7Q14999 1698 aa14.18□□□□□ -0.14
CHFR-211ENST00000535897 KDM6BO15054 1643 aa14.18□□□□□ -0.14
CHFR-211ENST00000535897 TSPOAP1O95153 1857 aa14.18□□□□□ -0.14
CHFR-211ENST00000535897 KIF27Q86VH2 1401 aa14.17□□□□□ -0.14
CHFR-211ENST00000535897 TTBK1Q5TCY1 1321 aaPredicted RBP14.16□□□□□ -0.14
CHFR-211ENST00000535897 IGF1RP08069 1367 aa14.14□□□□□ -0.15
CHFR-211ENST00000535897 PTPRGP23470 1445 aa14.11□□□□□ -0.15
CHFR-211ENST00000535897 CARMIL2Q6F5E8 1435 aa14.09□□□□□ -0.15
CHFR-211ENST00000535897 CARMIL1Q5VZK9 1371 aa14.07□□□□□ -0.16
CHFR-211ENST00000535897 IQGAP2Q13576 1575 aa14.06□□□□□ -0.16
CHFR-211ENST00000535897 KDM4FA0A1W2PPD8 638 aa14.06□□□□□ -0.16
CHFR-211ENST00000535897 TNIKQ9UKE5 1360 aa14.06□□□□□ -0.16
CHFR-211ENST00000535897 ABCC2Q92887 1545 aa14.05□□□□□ -0.16
CHFR-211ENST00000535897 ASXL2Q76L83 1435 aa14.04□□□□□ -0.16
CHFR-211ENST00000535897 PLB1Q6P1J6 1458 aa14.02□□□□□ -0.16
CHFR-211ENST00000535897 UACAQ9BZF9 1416 aa13.99□□□□□ -0.17
CHFR-211ENST00000535897 PPRC1Q5VV67 1664 aaKnown RBP13.99□□□□□ -0.17
CHFR-211ENST00000535897 GLI2P10070 1586 aa13.99□□□□□ -0.17
CHFR-211ENST00000535897 UHRF1BP1LA0JNW5 1464 aa13.99□□□□□ -0.17
CHFR-211ENST00000535897 DISP1Q96F81 1524 aa13.97□□□□□ -0.17
CHFR-211ENST00000535897 ADGRL1O94910 1474 aa13.95□□□□□ -0.18
CHFR-211ENST00000535897 ZCCHC11Q5TAX3 1644 aaKnown RBP13.94□□□□□ -0.18
CHFR-211ENST00000535897 EPRSP07814 1512 aaKnown RBP13.94□□□□□ -0.18
CHFR-211ENST00000535897 MAP3K4Q9Y6R4 1608 aa13.93□□□□□ -0.18
CHFR-211ENST00000535897 RAPGEF2Q9Y4G8 1499 aa13.93□□□□□ -0.18
CHFR-211ENST00000535897 UGGT2Q9NYU1 1516 aa13.93□□□□□ -0.18
CHFR-211ENST00000535897 KDM5BQ9UGL1 1544 aa13.93□□□□□ -0.18
CHFR-211ENST00000535897 KIAA0556O60303 1618 aa13.93□□□□□ -0.18
CHFR-211ENST00000535897 TEX14Q8IWB6 1497 aa13.93□□□□□ -0.18
CHFR-211ENST00000535897 COL17A1Q9UMD9 1497 aaPredicted RBP13.89□□□□□ -0.19
CHFR-211ENST00000535897 CTTNBP2Q8WZ74 1663 aa13.88□□□□□ -0.19
CHFR-211ENST00000535897 WDR7Q9Y4E6 1490 aa13.87□□□□□ -0.19
CHFR-211ENST00000535897 ILDR1Q86SU0 546 aaPredicted RBP13.86□□□□□ -0.19
CHFR-211ENST00000535897 GOLGA3Q08378 1498 aa13.83□□□□□ -0.2
CHFR-211ENST00000535897 KCNH8Q96L42 1107 aa13.83□□□□□ -0.2
CHFR-211ENST00000535897 HECW2Q9P2P5 1572 aa13.83□□□□□ -0.2
CHFR-211ENST00000535897 CFAP43Q8NDM7 1665 aa13.82□□□□□ -0.2
CHFR-211ENST00000535897 CD109Q6YHK3 1445 aa13.81□□□□□ -0.2
CHFR-211ENST00000535897 ABCA8O94911 1581 aa13.79□□□□□ -0.2
CHFR-211ENST00000535897 MAGI3Q5TCQ9 1506 aa13.78□□□□□ -0.2
CHFR-211ENST00000535897 FAM9AQ8IZU1 332 aaPredicted RBP13.77□□□□□ -0.21
CHFR-211ENST00000535897 ARID3CA6NKF2 412 aa13.76□□□□□ -0.21
CHFR-211ENST00000535897 KIF21BO75037 1637 aa13.75□□□□□ -0.21
CHFR-211ENST00000535897 P3H3Q8IVL6 736 aa13.72□□□□□ -0.21
CHFR-211ENST00000535897 PRXQ9BXM0 1461 aa13.71□□□□□ -0.21
CHFR-211ENST00000535897 ARAP3Q8WWN8 1544 aa13.68□□□□□ -0.22
CHFR-211ENST00000535897 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.67□□□□□ -0.22
CHFR-211ENST00000535897 HNRNPUL2Q1KMD3 747 aaKnown RBP13.67□□□□□ -0.22
CHFR-211ENST00000535897 ATP10BO94823 1461 aa13.67□□□□□ -0.22
CHFR-211ENST00000535897 ABCA9Q8IUA7 1624 aa13.65□□□□□ -0.22
CHFR-211ENST00000535897 RAPGEF6Q8TEU7 1601 aa13.63□□□□□ -0.23
CHFR-211ENST00000535897 SAMD9Q5K651 1589 aa13.62□□□□□ -0.23
CHFR-211ENST00000535897 PHLDB1Q86UU1 1377 aa13.62□□□□□ -0.23
CHFR-211ENST00000535897 RAPGEF3O95398 923 aa13.62□□□□□ -0.23
CHFR-211ENST00000535897 RANGAP1P46060 587 aaPredicted RBP13.62□□□□□ -0.23
CHFR-211ENST00000535897 ARID4BQ4LE39 1312 aaPredicted RBP13.62□□□□□ -0.23
CHFR-211ENST00000535897 PTPRMP28827 1452 aa13.61□□□□□ -0.23
CHFR-211ENST00000535897 NEO1Q92859 1461 aa13.61□□□□□ -0.23
CHFR-211ENST00000535897 ADAMTSL3P82987 1691 aa13.59□□□□□ -0.23
CHFR-211ENST00000535897 CSRNP3Q8WYN3 585 aa13.58□□□□□ -0.24
CHFR-211ENST00000535897 BCORL1Q5H9F3 1711 aa13.57□□□□□ -0.24
CHFR-211ENST00000535897 FRMPD1Q5SYB0 1578 aa13.57□□□□□ -0.24
CHFR-211ENST00000535897 MADDQ8WXG6 1647 aa13.57□□□□□ -0.24
CHFR-211ENST00000535897 NUP153P49790 1475 aaKnown RBP13.56□□□□□ -0.24
CHFR-211ENST00000535897 FBXO41Q8TF61 875 aa13.55□□□□□ -0.24
CHFR-211ENST00000535897 FHOD3Q2V2M9 1422 aa13.55□□□□□ -0.24
CHFR-211ENST00000535897 PLEKHD1A6NEE1 506 aa13.53□□□□□ -0.24
CHFR-211ENST00000535897 ARHGEF40Q8TER5 1519 aa13.53□□□□□ -0.24
CHFR-211ENST00000535897 PCF11O94913 1555 aaKnown RBP13.53□□□□□ -0.24
CHFR-211ENST00000535897 RIMS1Q86UR5 1692 aaKnown RBP13.53□□□□□ -0.24
CHFR-211ENST00000535897 PLPPR3Q6T4P5 718 aa13.52□□□□□ -0.25
CHFR-211ENST00000535897 DENND4BO75064 1496 aaPredicted RBP13.52□□□□□ -0.25
CHFR-211ENST00000535897 CFAP74Q9C0B2 1584 aa13.52□□□□□ -0.25
CHFR-211ENST00000535897 RICTORQ6R327 1708 aa13.51□□□□□ -0.25
CHFR-211ENST00000535897 FANCAO15360 1455 aa13.51□□□□□ -0.25
CHFR-211ENST00000535897 LMTK3Q96Q04 1460 aa13.49□□□□□ -0.25
CHFR-211ENST00000535897 AKNAQ7Z591 1439 aa13.49□□□□□ -0.25
CHFR-211ENST00000535897 TTC37Q6PGP7 1564 aa13.49□□□□□ -0.25
CHFR-211ENST00000535897 EEA1Q15075 1411 aa13.48□□□□□ -0.25
CHFR-211ENST00000535897 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.48□□□□□ -0.25
CHFR-211ENST00000535897 POGZQ7Z3K3 1410 aa13.47□□□□□ -0.25
CHFR-211ENST00000535897 ZFYVE16Q7Z3T8 1539 aa13.47□□□□□ -0.25
CHFR-211ENST00000535897 EFCAB5A4FU69 1503 aa13.46□□□□□ -0.25
CHFR-211ENST00000535897 ZMYM4Q5VZL5 1548 aa13.44□□□□□ -0.26
CHFR-211ENST00000535897 HSPA2P54652 639 aa13.44□□□□□ -0.26
CHFR-211ENST00000535897 MLECQ14165 292 aa13.44□□□□□ -0.26
CHFR-211ENST00000535897 CDK13Q14004 1512 aaKnown RBP13.44□□□□□ -0.26
CHFR-211ENST00000535897 YEATS2Q9ULM3 1422 aa13.43□□□□□ -0.26
CHFR-211ENST00000535897 ATP1B4Q9UN42 357 aaPredicted RBP13.43□□□□□ -0.26
CHFR-211ENST00000535897 FER1L4A9Z1Z3 1794 aa13.43□□□□□ -0.26
CHFR-211ENST00000535897 HECW1Q76N89 1606 aa13.42□□□□□ -0.26
CHFR-211ENST00000535897 SIGLEC1Q9BZZ2 1709 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 173.1 ms