RNA–Protein interactions for RNA: ENST00000535731.1

LRP6-202, Transcript of LDL receptor related protein 6, humanhuman

TSL 3

Gene LRP6, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-202ENST00000535731 NPM1P06748 294 aaKnown RBP eCLIP35.16■■■■□ 3.22
LRP6-202ENST00000535731 BIVM-ERCC5R4GMW8 1640 aa35.14■■■■□ 3.22
LRP6-202ENST00000535731 ABCC10Q5T3U5 1492 aa35.08■■■■□ 3.21
LRP6-202ENST00000535731 MAPKBP1O60336 1514 aa34.96■■■■□ 3.19
LRP6-202ENST00000535731 KDM4FA0A1W2PPD8 638 aa34.89■■■■□ 3.18
LRP6-202ENST00000535731 RUSC2Q8N2Y8 1516 aa34.88■■■■□ 3.17
LRP6-202ENST00000535731 DIP2BQ9P265 1576 aa34.87■■■■□ 3.17
LRP6-202ENST00000535731 ADCY10Q96PN6 1610 aa34.82■■■■□ 3.16
LRP6-202ENST00000535731 KIAA0586Q9BVV6 1533 aa34.78■■■■□ 3.16
LRP6-202ENST00000535731 KDM6BO15054 1643 aa34.77■■■■□ 3.16
LRP6-202ENST00000535731 IGF1RP08069 1367 aa34.71■■■■□ 3.15
LRP6-202ENST00000535731 PTPRGP23470 1445 aa34.64■■■■□ 3.14
LRP6-202ENST00000535731 TSPOAP1O95153 1857 aa34.62■■■■□ 3.13
LRP6-202ENST00000535731 KIF27Q86VH2 1401 aa34.57■■■■□ 3.13
LRP6-202ENST00000535731 ILDR1Q86SU0 546 aaPredicted RBP34.55■■■■□ 3.12
LRP6-202ENST00000535731 TTBK1Q5TCY1 1321 aaPredicted RBP34.55■■■■□ 3.12
LRP6-202ENST00000535731 TNIKQ9UKE5 1360 aa34.5■■■■□ 3.11
LRP6-202ENST00000535731 CUL7Q14999 1698 aa34.5■■■■□ 3.11
LRP6-202ENST00000535731 ABCC2Q92887 1545 aa34.49■■■■□ 3.11
LRP6-202ENST00000535731 CARMIL2Q6F5E8 1435 aa34.48■■■■□ 3.11
LRP6-202ENST00000535731 PLB1Q6P1J6 1458 aa34.46■■■■□ 3.11
LRP6-202ENST00000535731 ASXL2Q76L83 1435 aa34.46■■■■□ 3.11
LRP6-202ENST00000535731 CARMIL1Q5VZK9 1371 aa34.45■■■■□ 3.11
LRP6-202ENST00000535731 GLI2P10070 1586 aa34.4■■■■□ 3.1
LRP6-202ENST00000535731 UHRF1BP1LA0JNW5 1464 aa34.35■■■■□ 3.09
LRP6-202ENST00000535731 ADGRL1O94910 1474 aa34.33■■■■□ 3.09
LRP6-202ENST00000535731 UACAQ9BZF9 1416 aa34.32■■■■□ 3.08
LRP6-202ENST00000535731 PPRC1Q5VV67 1664 aaKnown RBP34.31■■■■□ 3.08
LRP6-202ENST00000535731 COL17A1Q9UMD9 1497 aaPredicted RBP34.27■■■■□ 3.08
LRP6-202ENST00000535731 IQGAP2Q13576 1575 aa34.25■■■■□ 3.07
LRP6-202ENST00000535731 EPRSP07814 1512 aaKnown RBP34.22■■■■□ 3.07
LRP6-202ENST00000535731 KDM5BQ9UGL1 1544 aa34.2■■■■□ 3.06
LRP6-202ENST00000535731 DISP1Q96F81 1524 aa34.19■■■■□ 3.06
LRP6-202ENST00000535731 TEX14Q8IWB6 1497 aa34.18■■■■□ 3.06
LRP6-202ENST00000535731 MAP3K4Q9Y6R4 1608 aa34.12■■■■□ 3.05
LRP6-202ENST00000535731 UGGT2Q9NYU1 1516 aa34.05■■■■□ 3.04
LRP6-202ENST00000535731 HECW2Q9P2P5 1572 aa34.05■■■■□ 3.04
LRP6-202ENST00000535731 ZCCHC11Q5TAX3 1644 aaKnown RBP34.02■■■■□ 3.04
LRP6-202ENST00000535731 RAPGEF2Q9Y4G8 1499 aa34.01■■■■□ 3.03
LRP6-202ENST00000535731 WDR7Q9Y4E6 1490 aa33.97■■■■□ 3.03
LRP6-202ENST00000535731 KIAA0556O60303 1618 aa33.93■■■■□ 3.02
LRP6-202ENST00000535731 CD109Q6YHK3 1445 aa33.91■■■■□ 3.02
LRP6-202ENST00000535731 KCNH8Q96L42 1107 aa33.9■■■■□ 3.02
LRP6-202ENST00000535731 MAGI3Q5TCQ9 1506 aa33.88■■■■□ 3.01
LRP6-202ENST00000535731 CFAP43Q8NDM7 1665 aa33.76■■■□□ 2.99
LRP6-202ENST00000535731 GOLGA3Q08378 1498 aa33.76■■■□□ 2.99
LRP6-202ENST00000535731 ABCA8O94911 1581 aa33.71■■■□□ 2.99
LRP6-202ENST00000535731 FBXO41Q8TF61 875 aa33.7■■■□□ 2.99
LRP6-202ENST00000535731 ARAP3Q8WWN8 1544 aa33.64■■■□□ 2.98
LRP6-202ENST00000535731 FAM9AQ8IZU1 332 aaPredicted RBP33.64■■■□□ 2.98
LRP6-202ENST00000535731 CTTNBP2Q8WZ74 1663 aa33.59■■■□□ 2.97
LRP6-202ENST00000535731 KIF21BO75037 1637 aa33.59■■■□□ 2.97
LRP6-202ENST00000535731 PHLDB1Q86UU1 1377 aa33.58■■■□□ 2.97
LRP6-202ENST00000535731 ARID3CA6NKF2 412 aa33.52■■■□□ 2.96
LRP6-202ENST00000535731 ATP10BO94823 1461 aa33.5■■■□□ 2.95
LRP6-202ENST00000535731 PTPRMP28827 1452 aa33.5■■■□□ 2.95
LRP6-202ENST00000535731 RAPGEF3O95398 923 aa33.48■■■□□ 2.95
LRP6-202ENST00000535731 PRXQ9BXM0 1461 aa33.46■■■□□ 2.95
LRP6-202ENST00000535731 P3H3Q8IVL6 736 aa33.46■■■□□ 2.95
LRP6-202ENST00000535731 ADAMTSL3P82987 1691 aa33.43■■■□□ 2.94
LRP6-202ENST00000535731 ABCA9Q8IUA7 1624 aa33.39■■■□□ 2.93
LRP6-202ENST00000535731 ARID4BQ4LE39 1312 aaPredicted RBP33.38■■■□□ 2.93
LRP6-202ENST00000535731 NEO1Q92859 1461 aa33.37■■■□□ 2.93
LRP6-202ENST00000535731 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.33■■■□□ 2.93
LRP6-202ENST00000535731 HNRNPUL2Q1KMD3 747 aaKnown RBP33.33■■■□□ 2.93
LRP6-202ENST00000535731 BCORL1Q5H9F3 1711 aa33.27■■■□□ 2.92
LRP6-202ENST00000535731 PCF11O94913 1555 aaKnown RBP33.26■■■□□ 2.92
LRP6-202ENST00000535731 LMTK3Q96Q04 1460 aa33.23■■■□□ 2.91
LRP6-202ENST00000535731 MADDQ8WXG6 1647 aa33.2■■■□□ 2.91
LRP6-202ENST00000535731 FRMPD1Q5SYB0 1578 aa33.19■■■□□ 2.9
LRP6-202ENST00000535731 RAPGEF6Q8TEU7 1601 aa33.18■■■□□ 2.9
LRP6-202ENST00000535731 PLEKHD1A6NEE1 506 aa33.16■■■□□ 2.9
LRP6-202ENST00000535731 DENND4BO75064 1496 aaPredicted RBP33.15■■■□□ 2.9
LRP6-202ENST00000535731 SAMD9Q5K651 1589 aa33.13■■■□□ 2.89
LRP6-202ENST00000535731 CSRNP3Q8WYN3 585 aa33.13■■■□□ 2.89
LRP6-202ENST00000535731 HSPA2P54652 639 aa33.11■■■□□ 2.89
LRP6-202ENST00000535731 NUP153P49790 1475 aaKnown RBP33.11■■■□□ 2.89
LRP6-202ENST00000535731 AKNAQ7Z591 1439 aa33.11■■■□□ 2.89
LRP6-202ENST00000535731 FHOD3Q2V2M9 1422 aa33.09■■■□□ 2.89
LRP6-202ENST00000535731 POGZQ7Z3K3 1410 aa33.07■■■□□ 2.88
LRP6-202ENST00000535731 ARHGEF40Q8TER5 1519 aa33.07■■■□□ 2.88
LRP6-202ENST00000535731 PLPPR3Q6T4P5 718 aa33.06■■■□□ 2.88
LRP6-202ENST00000535731 RIMS1Q86UR5 1692 aaKnown RBP33.05■■■□□ 2.88
LRP6-202ENST00000535731 CERKQ8TCT0 537 aa33.03■■■□□ 2.88
LRP6-202ENST00000535731 FANCAO15360 1455 aa33.02■■■□□ 2.88
LRP6-202ENST00000535731 RANGAP1P46060 587 aaPredicted RBP33.01■■■□□ 2.87
LRP6-202ENST00000535731 RICTORQ6R327 1708 aa32.99■■■□□ 2.87
LRP6-202ENST00000535731 MAGI2Q86UL8 1455 aa32.94■■■□□ 2.86
LRP6-202ENST00000535731 MLECQ14165 292 aa32.94■■■□□ 2.86
LRP6-202ENST00000535731 YEATS2Q9ULM3 1422 aa32.94■■■□□ 2.86
LRP6-202ENST00000535731 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.93■■■□□ 2.868e-6■□□□□ 10.5
LRP6-202ENST00000535731 CFAP74Q9C0B2 1584 aa32.93■■■□□ 2.86
LRP6-202ENST00000535731 ZMYM4Q5VZL5 1548 aa32.92■■■□□ 2.86
LRP6-202ENST00000535731 EFCAB5A4FU69 1503 aa32.91■■■□□ 2.86
LRP6-202ENST00000535731 ZFYVE16Q7Z3T8 1539 aa32.91■■■□□ 2.86
LRP6-202ENST00000535731 SCAPERQ9BY12 1400 aa32.84■■■□□ 2.85
LRP6-202ENST00000535731 TTC37Q6PGP7 1564 aa32.81■■■□□ 2.84
LRP6-202ENST00000535731 SIGLEC1Q9BZZ2 1709 aa32.81■■■□□ 2.84
LRP6-202ENST00000535731 HECW1Q76N89 1606 aa32.8■■■□□ 2.84
LRP6-202ENST00000535731 PLCH2O75038 1416 aa32.8■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms