RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, humanhuman

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-238ENST00000534647 JPH4Q96JJ6 628 aa20.46■□□□□ 0.87
CTNND1-238ENST00000534647 PRG4Q92954 1404 aaPredicted RBP20.44■□□□□ 0.86
CTNND1-238ENST00000534647 EHMT2Q96KQ7 1210 aa20.37■□□□□ 0.85
CTNND1-238ENST00000534647 IGF1RP08069 1367 aa20.34■□□□□ 0.85
CTNND1-238ENST00000534647 RUSC2Q8N2Y8 1516 aa20.32■□□□□ 0.84
CTNND1-238ENST00000534647 KIAA0586Q9BVV6 1533 aa20.3■□□□□ 0.84
CTNND1-238ENST00000534647 KIF27Q86VH2 1401 aa20.29■□□□□ 0.84
CTNND1-238ENST00000534647 NPM1P06748 294 aaKnown RBP eCLIP20.27■□□□□ 0.84
CTNND1-238ENST00000534647 ABCC10Q5T3U5 1492 aa20.24■□□□□ 0.83
CTNND1-238ENST00000534647 MAPKBP1O60336 1514 aa20.23■□□□□ 0.83
CTNND1-238ENST00000534647 KIF13AQ9H1H9 1805 aa20.23■□□□□ 0.83
CTNND1-238ENST00000534647 CUL7Q14999 1698 aa20.22■□□□□ 0.83
CTNND1-238ENST00000534647 FAM69CQ0P6D2 419 aa20.21■□□□□ 0.83
CTNND1-238ENST00000534647 CARMIL1Q5VZK9 1371 aa20.18■□□□□ 0.82
CTNND1-238ENST00000534647 ADCY10Q96PN6 1610 aa20.17■□□□□ 0.82
CTNND1-238ENST00000534647 PTPRGP23470 1445 aa20.12■□□□□ 0.81
CTNND1-238ENST00000534647 DIP2BQ9P265 1576 aa20.12■□□□□ 0.81
CTNND1-238ENST00000534647 CARMIL2Q6F5E8 1435 aa20.09■□□□□ 0.81
CTNND1-238ENST00000534647 TNIKQ9UKE5 1360 aa20.08■□□□□ 0.81
CTNND1-238ENST00000534647 ABCC2Q92887 1545 aa20.02■□□□□ 0.8
CTNND1-238ENST00000534647 IQGAP2Q13576 1575 aa20.01■□□□□ 0.79
CTNND1-238ENST00000534647 UHRF1BP1LA0JNW5 1464 aa20.01■□□□□ 0.79
CTNND1-238ENST00000534647 SENP3Q9H4L4 574 aaPredicted RBP19.99■□□□□ 0.79
CTNND1-238ENST00000534647 PLB1Q6P1J6 1458 aa19.98■□□□□ 0.79
CTNND1-238ENST00000534647 DISP1Q96F81 1524 aa19.97■□□□□ 0.79
CTNND1-238ENST00000534647 UACAQ9BZF9 1416 aa19.96■□□□□ 0.79
CTNND1-238ENST00000534647 KDM6BO15054 1643 aa19.96■□□□□ 0.79
CTNND1-238ENST00000534647 RAPGEF2Q9Y4G8 1499 aa19.96■□□□□ 0.79
CTNND1-238ENST00000534647 ASXL2Q76L83 1435 aa19.95■□□□□ 0.78
CTNND1-238ENST00000534647 GLI2P10070 1586 aa19.94■□□□□ 0.78
CTNND1-238ENST00000534647 TTBK1Q5TCY1 1321 aaPredicted RBP19.94■□□□□ 0.78
CTNND1-238ENST00000534647 UGGT2Q9NYU1 1516 aa19.93■□□□□ 0.78
CTNND1-238ENST00000534647 KDM5BQ9UGL1 1544 aa19.91■□□□□ 0.78
CTNND1-238ENST00000534647 KDM4FA0A1W2PPD8 638 aa19.89■□□□□ 0.77
CTNND1-238ENST00000534647 TSPOAP1O95153 1857 aa19.88■□□□□ 0.77
CTNND1-238ENST00000534647 KCNA4P22459 653 aa19.85■□□□□ 0.77
CTNND1-238ENST00000534647 EPRSP07814 1512 aaKnown RBP19.83■□□□□ 0.77
CTNND1-238ENST00000534647 PPRC1Q5VV67 1664 aaKnown RBP19.82■□□□□ 0.76
CTNND1-238ENST00000534647 KIAA0556O60303 1618 aa19.82■□□□□ 0.76
CTNND1-238ENST00000534647 MAP3K4Q9Y6R4 1608 aa19.77■□□□□ 0.76
CTNND1-238ENST00000534647 GOLGA3Q08378 1498 aa19.77■□□□□ 0.76
CTNND1-238ENST00000534647 TEX14Q8IWB6 1497 aa19.77■□□□□ 0.76
CTNND1-238ENST00000534647 ZCCHC11Q5TAX3 1644 aaKnown RBP19.76■□□□□ 0.75
CTNND1-238ENST00000534647 COL17A1Q9UMD9 1497 aaPredicted RBP19.76■□□□□ 0.75
CTNND1-238ENST00000534647 PRXQ9BXM0 1461 aa19.75■□□□□ 0.75
CTNND1-238ENST00000534647 WDR7Q9Y4E6 1490 aa19.73■□□□□ 0.75
CTNND1-238ENST00000534647 CTTNBP2Q8WZ74 1663 aa19.7■□□□□ 0.74
CTNND1-238ENST00000534647 ABCA8O94911 1581 aa19.7■□□□□ 0.74
CTNND1-238ENST00000534647 MAGI3Q5TCQ9 1506 aa19.66■□□□□ 0.74
CTNND1-238ENST00000534647 CD109Q6YHK3 1445 aa19.65■□□□□ 0.74
CTNND1-238ENST00000534647 ADGRL1O94910 1474 aa19.65■□□□□ 0.74
CTNND1-238ENST00000534647 FAM9AQ8IZU1 332 aaPredicted RBP19.63■□□□□ 0.73
CTNND1-238ENST00000534647 KCNH8Q96L42 1107 aa19.62■□□□□ 0.73
CTNND1-238ENST00000534647 CFAP43Q8NDM7 1665 aa19.59■□□□□ 0.73
CTNND1-238ENST00000534647 CSRNP3Q8WYN3 585 aa19.58■□□□□ 0.72
CTNND1-238ENST00000534647 ATP10BO94823 1461 aa19.55■□□□□ 0.72
CTNND1-238ENST00000534647 PHLDB1Q86UU1 1377 aa19.53■□□□□ 0.72
CTNND1-238ENST00000534647 ARAP3Q8WWN8 1544 aa19.52■□□□□ 0.72
CTNND1-238ENST00000534647 P3H3Q8IVL6 736 aa19.51■□□□□ 0.71
CTNND1-238ENST00000534647 SAMD9Q5K651 1589 aa19.49■□□□□ 0.71
CTNND1-238ENST00000534647 EEA1Q15075 1411 aa19.47■□□□□ 0.71
CTNND1-238ENST00000534647 ABCA9Q8IUA7 1624 aa19.44■□□□□ 0.7
CTNND1-238ENST00000534647 ARID3CA6NKF2 412 aa19.44■□□□□ 0.7
CTNND1-238ENST00000534647 ADRA2BP18089 450 aa19.44■□□□□ 0.7
CTNND1-238ENST00000534647 RAPGEF6Q8TEU7 1601 aa19.41■□□□□ 0.7
CTNND1-238ENST00000534647 NEO1Q92859 1461 aa19.41■□□□□ 0.7
CTNND1-238ENST00000534647 HECW2Q9P2P5 1572 aa19.4■□□□□ 0.7
CTNND1-238ENST00000534647 NUP153P49790 1475 aaKnown RBP19.38■□□□□ 0.69
CTNND1-238ENST00000534647 ILDR1Q86SU0 546 aaPredicted RBP19.38■□□□□ 0.69
CTNND1-238ENST00000534647 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.36■□□□□ 0.69
CTNND1-238ENST00000534647 HNRNPUL2Q1KMD3 747 aaKnown RBP19.36■□□□□ 0.69
CTNND1-238ENST00000534647 SLC24A1O60721 1099 aa19.35■□□□□ 0.69
CTNND1-238ENST00000534647 RAPGEF3O95398 923 aa19.35■□□□□ 0.69
CTNND1-238ENST00000534647 PLEKHD1A6NEE1 506 aa19.34■□□□□ 0.69
CTNND1-238ENST00000534647 KIF21BO75037 1637 aa19.33■□□□□ 0.69
CTNND1-238ENST00000534647 FHOD3Q2V2M9 1422 aa19.32■□□□□ 0.68
CTNND1-238ENST00000534647 RANGAP1P46060 587 aaPredicted RBP19.28■□□□□ 0.68
CTNND1-238ENST00000534647 EFCAB5A4FU69 1503 aa19.28■□□□□ 0.68
CTNND1-238ENST00000534647 ADAMTSL3P82987 1691 aa19.27■□□□□ 0.68
CTNND1-238ENST00000534647 PTPRMP28827 1452 aa19.26■□□□□ 0.67
CTNND1-238ENST00000534647 FRMPD1Q5SYB0 1578 aa19.26■□□□□ 0.67
CTNND1-238ENST00000534647 AKNAQ7Z591 1439 aa19.25■□□□□ 0.67
CTNND1-238ENST00000534647 DENND4BO75064 1496 aaPredicted RBP19.24■□□□□ 0.67
CTNND1-238ENST00000534647 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.22■□□□□ 0.67
CTNND1-238ENST00000534647 FANCAO15360 1455 aa19.22■□□□□ 0.67
CTNND1-238ENST00000534647 ARID4BQ4LE39 1312 aaPredicted RBP19.2■□□□□ 0.66
CTNND1-238ENST00000534647 BCORL1Q5H9F3 1711 aa19.19■□□□□ 0.66
CTNND1-238ENST00000534647 CFAP74Q9C0B2 1584 aa19.18■□□□□ 0.66
CTNND1-238ENST00000534647 ARHGEF40Q8TER5 1519 aa19.17■□□□□ 0.66
CTNND1-238ENST00000534647 RICTORQ6R327 1708 aa19.17■□□□□ 0.66
CTNND1-238ENST00000534647 MAGI2Q86UL8 1455 aa19.16■□□□□ 0.66
CTNND1-238ENST00000534647 SLC4A1APQ9BWU0 796 aaKnown RBP19.16■□□□□ 0.66
CTNND1-238ENST00000534647 PLCH2O75038 1416 aa19.16■□□□□ 0.66
CTNND1-238ENST00000534647 ZMYM4Q5VZL5 1548 aa19.15■□□□□ 0.66
CTNND1-238ENST00000534647 FMN1Q68DA7 1419 aa19.14■□□□□ 0.65
CTNND1-238ENST00000534647 TTC37Q6PGP7 1564 aa19.14■□□□□ 0.65
CTNND1-238ENST00000534647 MADDQ8WXG6 1647 aa19.12■□□□□ 0.65
CTNND1-238ENST00000534647 CDK13Q14004 1512 aaKnown RBP19.12■□□□□ 0.65
CTNND1-238ENST00000534647 POGZQ7Z3K3 1410 aa19.12■□□□□ 0.65
CTNND1-238ENST00000534647 UBTFP17480 764 aaKnown RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms