RNA–Protein interactions for RNA: ENST00000534548.6

NCAPD3-214, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NCAPD3, Length 5,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-214ENST00000534548 CCDC136Q96JN2 1154 aa13.95□□□□□ -0.18
NCAPD3-214ENST00000534548 ATAD2BQ9ULI0 1458 aa13.94□□□□□ -0.18
NCAPD3-214ENST00000534548 FAM9BQ8IZU0 186 aa13.92□□□□□ -0.18
NCAPD3-214ENST00000534548 BICRAQ9NZM4 1560 aa13.9□□□□□ -0.18
NCAPD3-214ENST00000534548 P3H3Q8IVL6 736 aa13.88□□□□□ -0.19
NCAPD3-214ENST00000534548 NOP58Q9Y2X3 529 aaKnown RBP13.88□□□□□ -0.19
NCAPD3-214ENST00000534548 HIRIP3Q9BW71 556 aaPredicted RBP13.84□□□□□ -0.19
NCAPD3-214ENST00000534548 KIF21BO75037 1637 aa13.83□□□□□ -0.19
NCAPD3-214ENST00000534548 TONSLQ96HA7 1378 aa13.83□□□□□ -0.2
NCAPD3-214ENST00000534548 ZNF326Q5BKZ1 582 aaKnown RBP13.81□□□□□ -0.2
NCAPD3-214ENST00000534548 NEFMP07197 916 aa13.81□□□□□ -0.2
NCAPD3-214ENST00000534548 DHX57Q6P158 1386 aaKnown RBP13.79□□□□□ -0.2
NCAPD3-214ENST00000534548 PPP4R2Q9NY27 417 aa13.79□□□□□ -0.2
NCAPD3-214ENST00000534548 ARXQ96QS3 562 aa13.78□□□□□ -0.2
NCAPD3-214ENST00000534548 MRS2Q9HD23 443 aa13.78□□□□□ -0.2
NCAPD3-214ENST00000534548 KIF27Q86VH2 1401 aa13.76□□□□□ -0.21
NCAPD3-214ENST00000534548 LAS1LQ9Y4W2 734 aaKnown RBP13.75□□□□□ -0.21
NCAPD3-214ENST00000534548 PPM1GO15355 546 aaPredicted RBP13.75□□□□□ -0.21
NCAPD3-214ENST00000534548 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.73□□□□□ -0.21
NCAPD3-214ENST00000534548 ARAP1Q96P48 1450 aa13.73□□□□□ -0.21
NCAPD3-214ENST00000534548 PEG3Q9GZU2 1588 aa13.73□□□□□ -0.21
NCAPD3-214ENST00000534548 ANP32BQ92688 251 aaKnown RBP13.72□□□□□ -0.21
NCAPD3-214ENST00000534548 DDRGK1Q96HY6 314 aa13.72□□□□□ -0.21
NCAPD3-214ENST00000534548 CCNB3Q8WWL7 1395 aa13.72□□□□□ -0.21
NCAPD3-214ENST00000534548 CANXP27824 592 aaKnown RBP13.72□□□□□ -0.21
NCAPD3-214ENST00000534548 ERICH6BQ5W0A0 696 aa13.71□□□□□ -0.21
NCAPD3-214ENST00000534548 SIN3AQ96ST3 1273 aa13.71□□□□□ -0.21
NCAPD3-214ENST00000534548 KCNH8Q96L42 1107 aa13.71□□□□□ -0.21
NCAPD3-214ENST00000534548 B4GALNT3Q6L9W6 998 aa13.7□□□□□ -0.22
NCAPD3-214ENST00000534548 TOP2BQ02880 1626 aa13.69□□□□□ -0.22
NCAPD3-214ENST00000534548 SALL2Q9Y467 1007 aaPredicted RBP13.68□□□□□ -0.22
NCAPD3-214ENST00000534548 PRXQ9BXM0 1461 aa13.68□□□□□ -0.22
NCAPD3-214ENST00000534548 CUX2O14529 1486 aa13.67□□□□□ -0.22
NCAPD3-214ENST00000534548 UPF2Q9HAU5 1272 aaKnown RBP13.66□□□□□ -0.22
NCAPD3-214ENST00000534548 RAB3GAP2Q9H2M9 1393 aa13.65□□□□□ -0.22
NCAPD3-214ENST00000534548 TMC1Q8TDI8 760 aa13.64□□□□□ -0.23
NCAPD3-214ENST00000534548 SLC4A1APQ9BWU0 796 aaKnown RBP13.64□□□□□ -0.23
NCAPD3-214ENST00000534548 CUX1P39880 1505 aa13.64□□□□□ -0.23
NCAPD3-214ENST00000534548 NAP1L5Q96NT1 182 aaPredicted RBP13.63□□□□□ -0.23
NCAPD3-214ENST00000534548 CARMIL1Q5VZK9 1371 aa13.61□□□□□ -0.23
NCAPD3-214ENST00000534548 ARHGAP35Q9NRY4 1499 aa13.61□□□□□ -0.23
NCAPD3-214ENST00000534548 PRKCSHP14314 528 aaPredicted RBP13.6□□□□□ -0.23
NCAPD3-214ENST00000534548 CCER2I3L3R5 266 aa13.6□□□□□ -0.23
NCAPD3-214ENST00000534548 ERICH3Q5RHP9 1530 aa13.59□□□□□ -0.23
NCAPD3-214ENST00000534548 HSP90AA1P07900 732 aaKnown RBP13.58□□□□□ -0.24
NCAPD3-214ENST00000534548 IGF1RP08069 1367 aa13.58□□□□□ -0.24
NCAPD3-214ENST00000534548 RRBP1Q9P2E9 1410 aaKnown RBP13.57□□□□□ -0.24
NCAPD3-214ENST00000534548 TRIM44Q96DX7 344 aaPredicted RBP13.56□□□□□ -0.24
NCAPD3-214ENST00000534548 EIF4G2P78344 907 aaKnown RBP eCLIP13.56□□□□□ -0.24
NCAPD3-214ENST00000534548 NCAPD3P42695 1498 aa13.56□□□□□ -0.24
NCAPD3-214ENST00000534548 ARID3CA6NKF2 412 aa13.55□□□□□ -0.24
NCAPD3-214ENST00000534548 FANCIQ9NVI1 1328 aa13.55□□□□□ -0.24
NCAPD3-214ENST00000534548 SETD5Q9C0A6 1442 aa13.54□□□□□ -0.24
NCAPD3-214ENST00000534548 BECN1Q14457 450 aa13.54□□□□□ -0.24
NCAPD3-214ENST00000534548 SENP3-EIF4A1A0A087X0R7 540 aa13.53□□□□□ -0.24
NCAPD3-214ENST00000534548 PHLDB1Q86UU1 1377 aa13.53□□□□□ -0.24
NCAPD3-214ENST00000534548 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.53□□□□□ -0.24
NCAPD3-214ENST00000534548 BIVM-ERCC5R4GMW8 1640 aa13.52□□□□□ -0.24
NCAPD3-214ENST00000534548 CFTRP13569 1480 aa13.52□□□□□ -0.25
NCAPD3-214ENST00000534548 IPO9Q96P70 1041 aaKnown RBP13.52□□□□□ -0.25
NCAPD3-214ENST00000534548 FHOD3Q2V2M9 1422 aa13.5□□□□□ -0.25
NCAPD3-214ENST00000534548 CHIC2Q9UKJ5 165 aa13.49□□□□□ -0.25
NCAPD3-214ENST00000534548 CADPSQ9ULU8 1353 aa13.48□□□□□ -0.25
NCAPD3-214ENST00000534548 FGD5Q6ZNL6 1462 aa13.47□□□□□ -0.25
NCAPD3-214ENST00000534548 ANO8Q9HCE9 1232 aaPredicted RBP13.47□□□□□ -0.25
NCAPD3-214ENST00000534548 MTUS2Q5JR59 1369 aa13.45□□□□□ -0.26
NCAPD3-214ENST00000534548 HMGXB3Q12766 1538 aa13.45□□□□□ -0.26
NCAPD3-214ENST00000534548 LRRC9Q6ZRR7 1453 aa13.44□□□□□ -0.26
NCAPD3-214ENST00000534548 FHAD1B1AJZ9 1412 aa13.44□□□□□ -0.26
NCAPD3-214ENST00000534548 RRP7BPQ9NSQ0 103 aa13.44□□□□□ -0.26
NCAPD3-214ENST00000534548 TNNT2P45379 298 aaPredicted RBP13.43□□□□□ -0.26
NCAPD3-214ENST00000534548 PPP1R15AO75807 674 aaPredicted RBP13.43□□□□□ -0.26
NCAPD3-214ENST00000534548 RAD54L2Q9Y4B4 1467 aa13.43□□□□□ -0.26
NCAPD3-214ENST00000534548 L1TD1Q5T7N2 865 aaKnown RBP13.41□□□□□ -0.26
NCAPD3-214ENST00000534548 TIAM1Q13009 1591 aa13.41□□□□□ -0.26
NCAPD3-214ENST00000534548 WDR97A6NE52 1622 aa13.41□□□□□ -0.26
NCAPD3-214ENST00000534548 MAPKBP1O60336 1514 aa13.39□□□□□ -0.27
NCAPD3-214ENST00000534548 RSPH6AQ9H0K4 717 aa13.39□□□□□ -0.27
NCAPD3-214ENST00000534548 USP35Q9P2H5 1018 aa13.38□□□□□ -0.27
NCAPD3-214ENST00000534548 TDRD9Q8NDG6 1382 aaKnown RBP13.38□□□□□ -0.27
NCAPD3-214ENST00000534548 RGS3P49796 1198 aa13.38□□□□□ -0.27
NCAPD3-214ENST00000534548 WDR43Q15061 677 aaKnown RBP eCLIP13.37□□□□□ -0.27
NCAPD3-214ENST00000534548 TIMELESSQ9UNS1 1208 aa13.37□□□□□ -0.27
NCAPD3-214ENST00000534548 ARID4BQ4LE39 1312 aaPredicted RBP13.36□□□□□ -0.27
NCAPD3-214ENST00000534548 PNNQ9H307 717 aaKnown RBP13.36□□□□□ -0.27
NCAPD3-214ENST00000534548 FANCD2Q9BXW9 1451 aa13.36□□□□□ -0.27
NCAPD3-214ENST00000534548 TCERG1O14776 1098 aaKnown RBP13.35□□□□□ -0.27
NCAPD3-214ENST00000534548 VSIG10Q8N0Z9 540 aa13.34□□□□□ -0.27
NCAPD3-214ENST00000534548 GOLGA6L22H0YM25 854 aa13.33□□□□□ -0.28
NCAPD3-214ENST00000534548 FOXD1Q16676 465 aa13.33□□□□□ -0.28
NCAPD3-214ENST00000534548 PCF11O94913 1555 aaKnown RBP13.31□□□□□ -0.28
NCAPD3-214ENST00000534548 GSE1Q14687 1217 aa13.31□□□□□ -0.28
NCAPD3-214ENST00000534548 NESP48681 1621 aa13.31□□□□□ -0.28
NCAPD3-214ENST00000534548 HSP90AA2PQ14568 343 aaPredicted RBP13.3□□□□□ -0.28
NCAPD3-214ENST00000534548 NCLP19338 710 aaKnown RBP13.29□□□□□ -0.28
NCAPD3-214ENST00000534548 ZNF777Q9ULD5 760 aaPredicted RBP13.29□□□□□ -0.28
NCAPD3-214ENST00000534548 KDM2AQ9Y2K7 1162 aa13.28□□□□□ -0.28
NCAPD3-214ENST00000534548 DNTTIP2Q5QJE6 756 aaKnown RBP13.28□□□□□ -0.28
NCAPD3-214ENST00000534548 FGD6Q6ZV73 1430 aa13.28□□□□□ -0.28
NCAPD3-214ENST00000534548 IL27Q8NEV9 243 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms