RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 NPM1P06748 294 aaKnown RBP eCLIP10.16□□□□□ -0.78
ECHDC1-223ENST00000534442 FBXO41Q8TF61 875 aa10.16□□□□□ -0.78
ECHDC1-223ENST00000534442 RGL2O15211 777 aa10.15□□□□□ -0.78
ECHDC1-223ENST00000534442 HAP1P54257 671 aaPredicted RBP10.14□□□□□ -0.79
ECHDC1-223ENST00000534442 ARHGEF11O15085 1522 aa10.13□□□□□ -0.79
ECHDC1-223ENST00000534442 CYB5RLQ6IPT4 315 aa10.13□□□□□ -0.79
ECHDC1-223ENST00000534442 PLEKHG5O94827 1062 aa10.11□□□□□ -0.79
ECHDC1-223ENST00000534442 BBXQ8WY36 941 aaPredicted RBP10.11□□□□□ -0.79
ECHDC1-223ENST00000534442 ZBTB47Q9UFB7 747 aaPredicted RBP10.11□□□□□ -0.79
ECHDC1-223ENST00000534442 CIZ1Q9ULV3 898 aaPredicted RBP10.1□□□□□ -0.79
ECHDC1-223ENST00000534442 AKT1S1Q96B36 256 aa10.06□□□□□ -0.8
ECHDC1-223ENST00000534442 SPDYE1Q8NFV5 336 aaPredicted RBP10.05□□□□□ -0.8
ECHDC1-223ENST00000534442 NESP48681 1621 aa10.04□□□□□ -0.8
ECHDC1-223ENST00000534442 RBM42Q9BTD8 480 aaKnown RBP10.04□□□□□ -0.8
ECHDC1-223ENST00000534442 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.04□□□□□ -0.8
ECHDC1-223ENST00000534442 ERCC6L2Q5T890 1561 aa10.02□□□□□ -0.81
ECHDC1-223ENST00000534442 NUBP1P53384 320 aa10.02□□□□□ -0.81
ECHDC1-223ENST00000534442 DISP3Q9P2K9 1392 aa10.01□□□□□ -0.81
ECHDC1-223ENST00000534442 SMARCA2P51531 1590 aa10.01□□□□□ -0.81
ECHDC1-223ENST00000534442 PAXIP1Q6ZW49 1069 aaPredicted RBP10.01□□□□□ -0.81
ECHDC1-223ENST00000534442 VSIG10Q8N0Z9 540 aa10.01□□□□□ -0.81
ECHDC1-223ENST00000534442 REM2Q8IYK8 340 aaPredicted RBP9.99□□□□□ -0.81
ECHDC1-223ENST00000534442 CREBZFQ9NS37 354 aa9.99□□□□□ -0.81
ECHDC1-223ENST00000534442 CFAP44Q96MT7 982 aa9.98□□□□□ -0.81
ECHDC1-223ENST00000534442 CHGAP10645 457 aaKnown RBP9.97□□□□□ -0.81
ECHDC1-223ENST00000534442 MNX1P50219 401 aaPredicted RBP9.97□□□□□ -0.81
ECHDC1-223ENST00000534442 CLEC11AQ9Y240 323 aa9.97□□□□□ -0.81
ECHDC1-223ENST00000534442 GSE1Q14687 1217 aa9.96□□□□□ -0.82
ECHDC1-223ENST00000534442 RNF25Q96BH1 459 aaPredicted RBP9.96□□□□□ -0.82
ECHDC1-223ENST00000534442 KDM2AQ9Y2K7 1162 aa9.96□□□□□ -0.82
ECHDC1-223ENST00000534442 KDM4FA0A1W2PPD8 638 aa9.95□□□□□ -0.82
ECHDC1-223ENST00000534442 PRR29P0C7W0 189 aa9.95□□□□□ -0.82
ECHDC1-223ENST00000534442 ARAP1Q96P48 1450 aa9.95□□□□□ -0.82
ECHDC1-223ENST00000534442 SPRYD3Q8NCJ5 442 aa9.93□□□□□ -0.82
ECHDC1-223ENST00000534442 DCAF8Q5TAQ9 597 aa9.92□□□□□ -0.82
ECHDC1-223ENST00000534442 HS6ST3Q8IZP7 471 aa9.91□□□□□ -0.82
ECHDC1-223ENST00000534442 TSHZ2Q9NRE2 1034 aa9.9□□□□□ -0.82
ECHDC1-223ENST00000534442 HECW2Q9P2P5 1572 aa9.88□□□□□ -0.83
ECHDC1-223ENST00000534442 PITPNM1O00562 1244 aa9.87□□□□□ -0.83
ECHDC1-223ENST00000534442 RASEFQ8IZ41 740 aa9.87□□□□□ -0.83
ECHDC1-223ENST00000534442 BCANQ96GW7 911 aa9.86□□□□□ -0.83
ECHDC1-223ENST00000534442 RIOK3O14730 519 aaKnown RBP9.85□□□□□ -0.83
ECHDC1-223ENST00000534442 FAM212AQ96EL1 285 aa9.85□□□□□ -0.83
ECHDC1-223ENST00000534442 KIF21AQ7Z4S6 1674 aa9.85□□□□□ -0.83
ECHDC1-223ENST00000534442 SCRIBQ14160 1630 aa9.85□□□□□ -0.83
ECHDC1-223ENST00000534442 MYO15BQ96JP2 1530 aa9.84□□□□□ -0.83
ECHDC1-223ENST00000534442 CHRM1P11229 460 aaPredicted RBP9.83□□□□□ -0.84
ECHDC1-223ENST00000534442 NKX1-1Q15270 411 aaPredicted RBP9.81□□□□□ -0.84
ECHDC1-223ENST00000534442 VGFO15240 615 aaPredicted RBP9.77□□□□□ -0.85
ECHDC1-223ENST00000534442 TAOK2Q9UL54 1235 aa9.77□□□□□ -0.85
ECHDC1-223ENST00000534442 SPATA31D1Q6ZQQ2 1576 aa9.76□□□□□ -0.85
ECHDC1-223ENST00000534442 GTPBP6O43824 516 aaPredicted RBP9.75□□□□□ -0.85
ECHDC1-223ENST00000534442 PYGBP11216 843 aa9.75□□□□□ -0.85
ECHDC1-223ENST00000534442 SYNJ2O15056 1496 aa9.74□□□□□ -0.85
ECHDC1-223ENST00000534442 STK25O00506 426 aa9.74□□□□□ -0.85
ECHDC1-223ENST00000534442 SGIP1Q9BQI5 828 aa9.74□□□□□ -0.85
ECHDC1-223ENST00000534442 WDR62O43379 1518 aa9.73□□□□□ -0.85
ECHDC1-223ENST00000534442 CHADLQ6NUI6 762 aa9.73□□□□□ -0.85
ECHDC1-223ENST00000534442 PRKCSHP14314 528 aaPredicted RBP9.72□□□□□ -0.85
ECHDC1-223ENST00000534442 MRC2Q9UBG0 1479 aa9.72□□□□□ -0.85
ECHDC1-223ENST00000534442 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.71□□□□□ -0.86
ECHDC1-223ENST00000534442 ZFP91Q96JP5 570 aaPredicted RBP9.71□□□□□ -0.86
ECHDC1-223ENST00000534442 LAMC3Q9Y6N6 1575 aa9.7□□□□□ -0.86
ECHDC1-223ENST00000534442 NCAPD3P42695 1498 aa9.69□□□□□ -0.86
ECHDC1-223ENST00000534442 BCL11BQ9C0K0 894 aaPredicted RBP9.69□□□□□ -0.86
ECHDC1-223ENST00000534442 PDS5BQ9NTI5 1447 aa9.68□□□□□ -0.86
ECHDC1-223ENST00000534442 FARP1Q9Y4F1 1045 aaPredicted RBP9.68□□□□□ -0.86
ECHDC1-223ENST00000534442 STK24Q9Y6E0 443 aa9.68□□□□□ -0.86
ECHDC1-223ENST00000534442 TSPYL2Q9H2G4 693 aaPredicted RBP9.66□□□□□ -0.86
ECHDC1-223ENST00000534442 RSF1Q96T23 1441 aaPredicted RBP9.62□□□□□ -0.87
ECHDC1-223ENST00000534442 PRKAR2AP13861 404 aaKnown RBP9.61□□□□□ -0.87
ECHDC1-223ENST00000534442 FXR2P51116 673 aaKnown RBP eCLIP9.6□□□□□ -0.87
ECHDC1-223ENST00000534442 TPRNQ4KMQ1 711 aa9.59□□□□□ -0.87
ECHDC1-223ENST00000534442 CCDC61Q9Y6R9 512 aa9.59□□□□□ -0.87
ECHDC1-223ENST00000534442 ZNF467Q7Z7K2 595 aaPredicted RBP9.58□□□□□ -0.88
ECHDC1-223ENST00000534442 PCDHB8Q9UN66 801 aa9.58□□□□□ -0.88
ECHDC1-223ENST00000534442 PCDHB13Q9Y5F0 798 aa9.58□□□□□ -0.88
ECHDC1-223ENST00000534442 ADGRL1O94910 1474 aa9.57□□□□□ -0.88
ECHDC1-223ENST00000534442 RYDENQ9NUL5 291 aaKnown RBP9.56□□□□□ -0.88
ECHDC1-223ENST00000534442 PDAP1Q13442 181 aaKnown RBP9.55□□□□□ -0.88
ECHDC1-223ENST00000534442 NBR1Q14596 966 aa9.52□□□□□ -0.89
ECHDC1-223ENST00000534442 ZNF579Q8NAF0 562 aaKnown RBP9.52□□□□□ -0.89
ECHDC1-223ENST00000534442 PSEN1P49768 467 aa9.51□□□□□ -0.89
ECHDC1-223ENST00000534442 PIP4P2Q8N4L2 257 aa9.5□□□□□ -0.89
ECHDC1-223ENST00000534442 HMGXB3Q12766 1538 aa9.5□□□□□ -0.89
ECHDC1-223ENST00000534442 CHRDL2Q6WN34 429 aa9.49□□□□□ -0.89
ECHDC1-223ENST00000534442 ATAD2BQ9ULI0 1458 aa9.48□□□□□ -0.89
ECHDC1-223ENST00000534442 IFNL1Q8IU54 200 aa9.48□□□□□ -0.89
ECHDC1-223ENST00000534442 CADPS2Q86UW7 1296 aa9.47□□□□□ -0.89
ECHDC1-223ENST00000534442 KIF12Q96FN5 646 aa9.47□□□□□ -0.89
ECHDC1-223ENST00000534442 MFRPQ9BY79 579 aa9.47□□□□□ -0.89
ECHDC1-223ENST00000534442 KIF13AQ9H1H9 1805 aa9.47□□□□□ -0.89
ECHDC1-223ENST00000534442 CHD1O14646 1710 aa9.46□□□□□ -0.89
ECHDC1-223ENST00000534442 MAP3K13O43283 966 aa9.46□□□□□ -0.9
ECHDC1-223ENST00000534442 KDM6BO15054 1643 aa9.45□□□□□ -0.9
ECHDC1-223ENST00000534442 PAK3O75914 559 aaPredicted RBP9.44□□□□□ -0.9
ECHDC1-223ENST00000534442 ZNF608Q9ULD9 1512 aaPredicted RBP9.41□□□□□ -0.9
ECHDC1-223ENST00000534442 EFCAB3Q8N7B9 438 aa9.4□□□□□ -0.9
ECHDC1-223ENST00000534442 FBXO22Q8NEZ5 403 aa9.4□□□□□ -0.9
ECHDC1-223ENST00000534442 CEP164Q9UPV0 1460 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms