RNA–Protein interactions for RNA: ENST00000534189.1

CCDC180-213, Transcript of coiled-coil domain containing 180, humanhuman

TSL 3

Gene CCDC180, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180-213ENST00000534189 FHAD1B1AJZ9 1412 aa28.18■■■□□ 2.1
CCDC180-213ENST00000534189 PRG4Q92954 1404 aaPredicted RBP28.18■■■□□ 2.1
CCDC180-213ENST00000534189 MAPKBP1O60336 1514 aa28.16■■■□□ 2.1
CCDC180-213ENST00000534189 ERICH3Q5RHP9 1530 aa28.15■■■□□ 2.1
CCDC180-213ENST00000534189 DIP2BQ9P265 1576 aa28.15■■■□□ 2.1
CCDC180-213ENST00000534189 KDM6BO15054 1643 aa28.12■■■□□ 2.09
CCDC180-213ENST00000534189 JPH4Q96JJ6 628 aa28.12■■■□□ 2.09
CCDC180-213ENST00000534189 NPM1P06748 294 aaKnown RBP eCLIP28.09■■■□□ 2.09
CCDC180-213ENST00000534189 KIF27Q86VH2 1401 aa28.01■■■□□ 2.07
CCDC180-213ENST00000534189 ADCY10Q96PN6 1610 aa27.98■■■□□ 2.07
CCDC180-213ENST00000534189 IGF1RP08069 1367 aa27.92■■■□□ 2.06
CCDC180-213ENST00000534189 TSPOAP1O95153 1857 aa27.9■■■□□ 2.06
CCDC180-213ENST00000534189 RUSC2Q8N2Y8 1516 aa27.9■■■□□ 2.06
CCDC180-213ENST00000534189 ADGRL1O94910 1474 aa27.84■■■□□ 2.05
CCDC180-213ENST00000534189 CUL7Q14999 1698 aa27.81■■■□□ 2.04
CCDC180-213ENST00000534189 HECW2Q9P2P5 1572 aa27.77■■■□□ 2.04
CCDC180-213ENST00000534189 CARMIL1Q5VZK9 1371 aa27.76■■■□□ 2.03
CCDC180-213ENST00000534189 PPRC1Q5VV67 1664 aaKnown RBP27.7■■■□□ 2.02
CCDC180-213ENST00000534189 KIAA0586Q9BVV6 1533 aa27.7■■■□□ 2.02
CCDC180-213ENST00000534189 GLI2P10070 1586 aa27.67■■■□□ 2.02
CCDC180-213ENST00000534189 COL17A1Q9UMD9 1497 aaPredicted RBP27.65■■■□□ 2.02
CCDC180-213ENST00000534189 PTPRGP23470 1445 aa27.61■■■□□ 2.01
CCDC180-213ENST00000534189 PLB1Q6P1J6 1458 aa27.61■■■□□ 2.01
CCDC180-213ENST00000534189 ABCC2Q92887 1545 aa27.61■■■□□ 2.01
CCDC180-213ENST00000534189 ASXL2Q76L83 1435 aa27.6■■■□□ 2.01
CCDC180-213ENST00000534189 FBXO41Q8TF61 875 aa27.56■■■□□ 2
CCDC180-213ENST00000534189 RAPGEF2Q9Y4G8 1499 aa27.54■■■□□ 2
CCDC180-213ENST00000534189 TNIKQ9UKE5 1360 aa27.49■■□□□ 1.99
CCDC180-213ENST00000534189 UHRF1BP1LA0JNW5 1464 aa27.47■■□□□ 1.99
CCDC180-213ENST00000534189 MAP3K4Q9Y6R4 1608 aa27.45■■□□□ 1.99
CCDC180-213ENST00000534189 IQGAP2Q13576 1575 aa27.45■■□□□ 1.99
CCDC180-213ENST00000534189 CARMIL2Q6F5E8 1435 aa27.45■■□□□ 1.98
CCDC180-213ENST00000534189 EPRSP07814 1512 aaKnown RBP27.45■■□□□ 1.98
CCDC180-213ENST00000534189 TEX14Q8IWB6 1497 aa27.43■■□□□ 1.98
CCDC180-213ENST00000534189 TTBK1Q5TCY1 1321 aaPredicted RBP27.42■■□□□ 1.98
CCDC180-213ENST00000534189 UACAQ9BZF9 1416 aa27.38■■□□□ 1.97
CCDC180-213ENST00000534189 KDM5BQ9UGL1 1544 aa27.36■■□□□ 1.97
CCDC180-213ENST00000534189 PRXQ9BXM0 1461 aa27.33■■□□□ 1.97
CCDC180-213ENST00000534189 CSRNP3Q8WYN3 585 aa27.3■■□□□ 1.96
CCDC180-213ENST00000534189 UGGT2Q9NYU1 1516 aa27.3■■□□□ 1.96
CCDC180-213ENST00000534189 DISP1Q96F81 1524 aa27.27■■□□□ 1.96
CCDC180-213ENST00000534189 EEA1Q15075 1411 aa27.24■■□□□ 1.95
CCDC180-213ENST00000534189 CTTNBP2Q8WZ74 1663 aa27.22■■□□□ 1.95
CCDC180-213ENST00000534189 ZCCHC11Q5TAX3 1644 aaKnown RBP27.22■■□□□ 1.95
CCDC180-213ENST00000534189 MAGI3Q5TCQ9 1506 aa27.17■■□□□ 1.94
CCDC180-213ENST00000534189 KIAA0556O60303 1618 aa27.17■■□□□ 1.94
CCDC180-213ENST00000534189 GOLGA3Q08378 1498 aa27.17■■□□□ 1.94
CCDC180-213ENST00000534189 WDR7Q9Y4E6 1490 aa27.16■■□□□ 1.94
CCDC180-213ENST00000534189 CHIC1Q5VXU3 224 aa27.12■■□□□ 1.93
CCDC180-213ENST00000534189 FAM9AQ8IZU1 332 aaPredicted RBP27.12■■□□□ 1.93
CCDC180-213ENST00000534189 CD109Q6YHK3 1445 aa27.11■■□□□ 1.93
CCDC180-213ENST00000534189 KIF21BO75037 1637 aa27.1■■□□□ 1.93
CCDC180-213ENST00000534189 PTPRMP28827 1452 aa27.06■■□□□ 1.92
CCDC180-213ENST00000534189 CFAP43Q8NDM7 1665 aa27.06■■□□□ 1.92
CCDC180-213ENST00000534189 LMTK3Q96Q04 1460 aa27.06■■□□□ 1.92
CCDC180-213ENST00000534189 ADAMTSL3P82987 1691 aa27.01■■□□□ 1.92
CCDC180-213ENST00000534189 ARAP3Q8WWN8 1544 aa27■■□□□ 1.91
CCDC180-213ENST00000534189 P3H3Q8IVL6 736 aa26.97■■□□□ 1.91
CCDC180-213ENST00000534189 KCNH8Q96L42 1107 aa26.97■■□□□ 1.91
CCDC180-213ENST00000534189 PCF11O94913 1555 aaKnown RBP26.95■■□□□ 1.9
CCDC180-213ENST00000534189 ABCA8O94911 1581 aa26.91■■□□□ 1.9
CCDC180-213ENST00000534189 RANGAP1P46060 587 aaPredicted RBP26.87■■□□□ 1.89
CCDC180-213ENST00000534189 SAMD9Q5K651 1589 aa26.87■■□□□ 1.89
CCDC180-213ENST00000534189 SOCS7O14512 581 aa26.84■■□□□ 1.89
CCDC180-213ENST00000534189 PHLDB1Q86UU1 1377 aa26.84■■□□□ 1.89
CCDC180-213ENST00000534189 ILDR2Q71H61 639 aa26.83■■□□□ 1.89
CCDC180-213ENST00000534189 BCORL1Q5H9F3 1711 aa26.82■■□□□ 1.88
CCDC180-213ENST00000534189 UBTFP17480 764 aaKnown RBP26.82■■□□□ 1.88
CCDC180-213ENST00000534189 CERKQ8TCT0 537 aa26.8■■□□□ 1.88
CCDC180-213ENST00000534189 MADDQ8WXG6 1647 aa26.79■■□□□ 1.88
CCDC180-213ENST00000534189 EHMT2Q96KQ7 1210 aa26.78■■□□□ 1.88
CCDC180-213ENST00000534189 RAPGEF3O95398 923 aa26.77■■□□□ 1.88
CCDC180-213ENST00000534189 ARID3CA6NKF2 412 aa26.74■■□□□ 1.87
CCDC180-213ENST00000534189 FHOD3Q2V2M9 1422 aa26.73■■□□□ 1.87
CCDC180-213ENST00000534189 HSPA2P54652 639 aa26.73■■□□□ 1.87
CCDC180-213ENST00000534189 EFCAB5A4FU69 1503 aa26.73■■□□□ 1.87
CCDC180-213ENST00000534189 ATP10BO94823 1461 aa26.72■■□□□ 1.87
CCDC180-213ENST00000534189 DISP3Q9P2K9 1392 aa26.71■■□□□ 1.87
CCDC180-213ENST00000534189 RAPGEF6Q8TEU7 1601 aa26.71■■□□□ 1.87
CCDC180-213ENST00000534189 ARID4BQ4LE39 1312 aaPredicted RBP26.69■■□□□ 1.86
CCDC180-213ENST00000534189 ABCA9Q8IUA7 1624 aa26.69■■□□□ 1.86
CCDC180-213ENST00000534189 NEO1Q92859 1461 aa26.68■■□□□ 1.86
CCDC180-213ENST00000534189 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.68■■□□□ 1.86
CCDC180-213ENST00000534189 HNRNPUL2Q1KMD3 747 aaKnown RBP26.68■■□□□ 1.86
CCDC180-213ENST00000534189 FRMPD1Q5SYB0 1578 aa26.67■■□□□ 1.86
CCDC180-213ENST00000534189 RIMS1Q86UR5 1692 aaKnown RBP26.64■■□□□ 1.86
CCDC180-213ENST00000534189 NUP153P49790 1475 aaKnown RBP26.62■■□□□ 1.85
CCDC180-213ENST00000534189 ARHGEF40Q8TER5 1519 aa26.55■■□□□ 1.84
CCDC180-213ENST00000534189 PLEKHD1A6NEE1 506 aa26.55■■□□□ 1.84
CCDC180-213ENST00000534189 FMN1Q68DA7 1419 aa26.53■■□□□ 1.84
CCDC180-213ENST00000534189 ARHGAP35Q9NRY4 1499 aa26.53■■□□□ 1.84
CCDC180-213ENST00000534189 ATP1B4Q9UN42 357 aaPredicted RBP26.48■■□□□ 1.83
CCDC180-213ENST00000534189 POGZQ7Z3K3 1410 aa26.48■■□□□ 1.83
CCDC180-213ENST00000534189 PLPPR3Q6T4P5 718 aa26.47■■□□□ 1.83
CCDC180-213ENST00000534189 DENND4BO75064 1496 aaPredicted RBP26.47■■□□□ 1.83
CCDC180-213ENST00000534189 RICTORQ6R327 1708 aa26.46■■□□□ 1.83
CCDC180-213ENST00000534189 FANCAO15360 1455 aa26.45■■□□□ 1.82
CCDC180-213ENST00000534189 AKNAQ7Z591 1439 aa26.43■■□□□ 1.82
CCDC180-213ENST00000534189 SIGLEC1Q9BZZ2 1709 aa26.42■■□□□ 1.82
CCDC180-213ENST00000534189 SPATA31D1Q6ZQQ2 1576 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms