RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 MAPKBP1O60336 1514 aa20.03■□□□□ 0.8
CSDE1-215ENST00000533818 JPH4Q96JJ6 628 aa19.98■□□□□ 0.79
CSDE1-215ENST00000533818 LMTK3Q96Q04 1460 aa19.97■□□□□ 0.79
CSDE1-215ENST00000533818 ABCA5Q8WWZ7 1642 aa19.96■□□□□ 0.79
CSDE1-215ENST00000533818 TSPOAP1O95153 1857 aa19.96■□□□□ 0.79
CSDE1-215ENST00000533818 ABCA10Q8WWZ4 1543 aa19.96■□□□□ 0.79
CSDE1-215ENST00000533818 ADAMTS12P58397 1594 aa19.9■□□□□ 0.78
CSDE1-215ENST00000533818 FHAD1B1AJZ9 1412 aa19.89■□□□□ 0.77
CSDE1-215ENST00000533818 ADCY10Q96PN6 1610 aa19.85■□□□□ 0.77
CSDE1-215ENST00000533818 SOCS7O14512 581 aa19.84■□□□□ 0.77
CSDE1-215ENST00000533818 ILDR2Q71H61 639 aa19.77■□□□□ 0.76
CSDE1-215ENST00000533818 COL17A1Q9UMD9 1497 aaPredicted RBP19.75■□□□□ 0.75
CSDE1-215ENST00000533818 WRNQ14191 1432 aaPredicted RBP eCLIP19.73■□□□□ 0.75
CSDE1-215ENST00000533818 DISP3Q9P2K9 1392 aa19.68■□□□□ 0.74
CSDE1-215ENST00000533818 ERICH3Q5RHP9 1530 aa19.66■□□□□ 0.74
CSDE1-215ENST00000533818 TOP2BQ02880 1626 aa19.66■□□□□ 0.74
CSDE1-215ENST00000533818 PPRC1Q5VV67 1664 aaKnown RBP19.66■□□□□ 0.74
CSDE1-215ENST00000533818 ASXL2Q76L83 1435 aa19.65■□□□□ 0.74
CSDE1-215ENST00000533818 PLB1Q6P1J6 1458 aa19.64■□□□□ 0.73
CSDE1-215ENST00000533818 GLI2P10070 1586 aa19.64■□□□□ 0.73
CSDE1-215ENST00000533818 RUSC2Q8N2Y8 1516 aa19.63■□□□□ 0.73
CSDE1-215ENST00000533818 TTBK1Q5TCY1 1321 aaPredicted RBP19.61■□□□□ 0.73
CSDE1-215ENST00000533818 PTPRGP23470 1445 aa19.6■□□□□ 0.73
CSDE1-215ENST00000533818 ABCC2Q92887 1545 aa19.57■□□□□ 0.72
CSDE1-215ENST00000533818 TEX14Q8IWB6 1497 aa19.57■□□□□ 0.72
CSDE1-215ENST00000533818 KIAA0586Q9BVV6 1533 aa19.52■□□□□ 0.72
CSDE1-215ENST00000533818 CERKQ8TCT0 537 aa19.49■□□□□ 0.71
CSDE1-215ENST00000533818 EPRSP07814 1512 aaKnown RBP19.49■□□□□ 0.71
CSDE1-215ENST00000533818 MAP3K4Q9Y6R4 1608 aa19.47■□□□□ 0.71
CSDE1-215ENST00000533818 TNIKQ9UKE5 1360 aa19.44■□□□□ 0.7
CSDE1-215ENST00000533818 PTPRMP28827 1452 aa19.43■□□□□ 0.7
CSDE1-215ENST00000533818 UHRF1BP1LA0JNW5 1464 aa19.41■□□□□ 0.7
CSDE1-215ENST00000533818 CUL7Q14999 1698 aa19.4■□□□□ 0.7
CSDE1-215ENST00000533818 CARMIL2Q6F5E8 1435 aa19.39■□□□□ 0.69
CSDE1-215ENST00000533818 BIVM-ERCC5R4GMW8 1640 aa19.37■□□□□ 0.69
CSDE1-215ENST00000533818 PCF11O94913 1555 aaKnown RBP19.37■□□□□ 0.69
CSDE1-215ENST00000533818 UACAQ9BZF9 1416 aa19.37■□□□□ 0.69
CSDE1-215ENST00000533818 KIF21BO75037 1637 aa19.36■□□□□ 0.69
CSDE1-215ENST00000533818 HSPA2P54652 639 aa19.33■□□□□ 0.68
CSDE1-215ENST00000533818 KDM5BQ9UGL1 1544 aa19.32■□□□□ 0.68
CSDE1-215ENST00000533818 CD109Q6YHK3 1445 aa19.3■□□□□ 0.68
CSDE1-215ENST00000533818 SPATA31D1Q6ZQQ2 1576 aa19.28■□□□□ 0.68
CSDE1-215ENST00000533818 ADAMTSL3P82987 1691 aa19.27■□□□□ 0.68
CSDE1-215ENST00000533818 MAGI3Q5TCQ9 1506 aa19.27■□□□□ 0.68
CSDE1-215ENST00000533818 IGF1RP08069 1367 aa19.26■□□□□ 0.67
CSDE1-215ENST00000533818 WDR7Q9Y4E6 1490 aa19.25■□□□□ 0.67
CSDE1-215ENST00000533818 KCNH8Q96L42 1107 aa19.25■□□□□ 0.67
CSDE1-215ENST00000533818 ZCCHC11Q5TAX3 1644 aaKnown RBP19.22■□□□□ 0.67
CSDE1-215ENST00000533818 ARID4BQ4LE39 1312 aaPredicted RBP19.22■□□□□ 0.67
CSDE1-215ENST00000533818 ARAP3Q8WWN8 1544 aa19.16■□□□□ 0.66
CSDE1-215ENST00000533818 PLPPR3Q6T4P5 718 aa19.16■□□□□ 0.66
CSDE1-215ENST00000533818 DISP1Q96F81 1524 aa19.14■□□□□ 0.65
CSDE1-215ENST00000533818 MADDQ8WXG6 1647 aa19.14■□□□□ 0.65
CSDE1-215ENST00000533818 CFAP43Q8NDM7 1665 aa19.14■□□□□ 0.65
CSDE1-215ENST00000533818 IQGAP2Q13576 1575 aa19.11■□□□□ 0.65
CSDE1-215ENST00000533818 RAPGEF3O95398 923 aa19.11■□□□□ 0.65
CSDE1-215ENST00000533818 BCORL1Q5H9F3 1711 aa19.11■□□□□ 0.65
CSDE1-215ENST00000533818 CARMIL1Q5VZK9 1371 aa19.1■□□□□ 0.65
CSDE1-215ENST00000533818 KIF27Q86VH2 1401 aa19.09■□□□□ 0.65
CSDE1-215ENST00000533818 PHLDB1Q86UU1 1377 aa19.05■□□□□ 0.64
CSDE1-215ENST00000533818 DMRT2Q9Y5R5 561 aa19.04■□□□□ 0.64
CSDE1-215ENST00000533818 RIMS1Q86UR5 1692 aaKnown RBP19.03■□□□□ 0.64
CSDE1-215ENST00000533818 UGGT2Q9NYU1 1516 aa18.97■□□□□ 0.63
CSDE1-215ENST00000533818 YEATS2Q9ULM3 1422 aa18.97■□□□□ 0.63
CSDE1-215ENST00000533818 KIAA0556O60303 1618 aa18.94■□□□□ 0.62
CSDE1-215ENST00000533818 POGZQ7Z3K3 1410 aa18.92■□□□□ 0.62
CSDE1-215ENST00000533818 SUPT5HO00267 1087 aaKnown RBP18.91■□□□□ 0.62
CSDE1-215ENST00000533818 MLECQ14165 292 aa18.89■□□□□ 0.61
CSDE1-215ENST00000533818 NEO1Q92859 1461 aa18.89■□□□□ 0.61
CSDE1-215ENST00000533818 ARID3CA6NKF2 412 aa18.87■□□□□ 0.61
CSDE1-215ENST00000533818 FRMPD1Q5SYB0 1578 aa18.86■□□□□ 0.61
CSDE1-215ENST00000533818 ABCA8O94911 1581 aa18.85■□□□□ 0.61
CSDE1-215ENST00000533818 FANCAO15360 1455 aa18.84■□□□□ 0.61
CSDE1-215ENST00000533818 ARHGEF40Q8TER5 1519 aa18.84■□□□□ 0.61
CSDE1-215ENST00000533818 AKNAQ7Z591 1439 aa18.82■□□□□ 0.6
CSDE1-215ENST00000533818 STRCQ7RTU9 1775 aa18.81■□□□□ 0.6
CSDE1-215ENST00000533818 CEBPAP49715 358 aaPredicted RBP18.81■□□□□ 0.6
CSDE1-215ENST00000533818 PTPRTO14522 1441 aa18.81■□□□□ 0.6
CSDE1-215ENST00000533818 ABCA9Q8IUA7 1624 aa18.81■□□□□ 0.6
CSDE1-215ENST00000533818 IQSEC2Q5JU85 1478 aa18.8■□□□□ 0.6
CSDE1-215ENST00000533818 DENND4BO75064 1496 aaPredicted RBP18.78■□□□□ 0.6
CSDE1-215ENST00000533818 UBAP1LF5GYI3 381 aa18.78■□□□□ 0.6
CSDE1-215ENST00000533818 LTBP4Q8N2S1 1624 aa18.78■□□□□ 0.6
CSDE1-215ENST00000533818 ATP10BO94823 1461 aa18.77■□□□□ 0.59
CSDE1-215ENST00000533818 TTC37Q6PGP7 1564 aa18.76■□□□□ 0.59
CSDE1-215ENST00000533818 PREX1Q8TCU6 1659 aa18.76■□□□□ 0.59
CSDE1-215ENST00000533818 FAM9AQ8IZU1 332 aaPredicted RBP18.76■□□□□ 0.59
CSDE1-215ENST00000533818 GOLGA3Q08378 1498 aa18.76■□□□□ 0.59
CSDE1-215ENST00000533818 RAPGEF2Q9Y4G8 1499 aa18.76■□□□□ 0.59
CSDE1-215ENST00000533818 UHRF1BP1Q6BDS2 1440 aa18.74■□□□□ 0.59
CSDE1-215ENST00000533818 FHOD3Q2V2M9 1422 aa18.74■□□□□ 0.59
CSDE1-215ENST00000533818 FER1L4A9Z1Z3 1794 aa18.71■□□□□ 0.59
CSDE1-215ENST00000533818 SIGLEC1Q9BZZ2 1709 aa18.69■□□□□ 0.58
CSDE1-215ENST00000533818 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.69■□□□□ 0.58
CSDE1-215ENST00000533818 HNRNPUL2Q1KMD3 747 aaKnown RBP18.69■□□□□ 0.58
CSDE1-215ENST00000533818 ZFYVE16Q7Z3T8 1539 aa18.69■□□□□ 0.58
CSDE1-215ENST00000533818 RICTORQ6R327 1708 aa18.67■□□□□ 0.58
CSDE1-215ENST00000533818 EFCAB5A4FU69 1503 aa18.66■□□□□ 0.58
CSDE1-215ENST00000533818 ARHGEF12Q9NZN5 1544 aa18.65■□□□□ 0.58
CSDE1-215ENST00000533818 MED1Q15648 1581 aaPredicted RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms